Gene: Medtr4g116860

General Information

Structural Information

  • Species Medicago truncatula
  • Gene Identifier Medtr4g116860
  • Transcript Identifier Medtr4g116860.1
  • Gene Type Coding gene
  • Location chr4 : 48375041-48390001 : positive

Gene Family Information

  • ID HOM05D000399
  • #Genes/#Species 1254/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 31111039
  • id Medtr4g116860.JCVIMt4.0v1

Descriptions

  • Description endoribonuclease dicer-like protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006353
ISO
PLAZA Integrative OrthologyDNA-templated transcription, termination AT5G20320
GO:0010267
ISO
PLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interference AT5G20320
GO:0010216
ISO
PLAZA Integrative Orthologymaintenance of DNA methylation AT5G20320
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus AT5G20320
GO:0010599
ISO
PLAZA Integrative Orthologyproduction of lsiRNA involved in RNA interference AT5G20320
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA Solyc07g005030.4
GO:0009616
ISO
PLAZA Integrative OrthologyRNAi-mediated antiviral immune response AT5G20320
GO:0051214
ISO
PLAZA Integrative OrthologyRNAi-mediated antiviral immunity against RNA virus AT5G20320
GO:0009944
ISO
PLAZA Integrative Orthologypolarity specification of adaxial/abaxial axis Os04g0509300
GO:0010050
ISO
PLAZA Integrative Orthologyvegetative phase change AT5G20320
GO:0035196
ISO
PLAZA Integrative Orthologyproduction of miRNAs involved in gene silencing by miRNA AT5G20320
GO:0048608
ISO
PLAZA Integrative Orthologyreproductive structure development Os04g0509300
GO:0010492
ISO
PLAZA Integrative Orthologymaintenance of shoot apical meristem identity Os04g0509300
GO:0006396
IEA
InterProRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004525
IEA
InterProribonuclease III activity
GO:0016787
IEA
InterProhydrolase activity
GO:0005524
IEA
InterProATP binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G20320

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014720 Double-stranded RNA-binding domain
IPR000999 Ribonuclease III domain
IPR036389 Ribonuclease III, endonuclease domain superfamily
IPR038248 Dicer dimerisation domain superfamily
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR003100 PAZ domain
IPR006935 Helicase/UvrB, N-terminal
IPR036085 PAZ domain superfamily
Mapman id Description
16.9.1.3 RNA processing.mRNA silencing.transacting siRNA pathway.endoribonuclease (DCL4)