Gene: AUR62042026
General Information
Structural Information
- Species Chenopodium quinoa
- Gene Identifier AUR62042026
- Transcript Identifier AUR62042026-RA
- Gene Type Coding gene
- Location C_Quinoa_Scaffold_2178 : 90157-112188 : positive
Gene Family Information
- ID HOM05D000399
- #Genes/#Species 1254/98
- Phylogenetic origin
- ID ORTHO05D008498
- #Genes/#Species 118/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id AUR62042026.v1.0
- pacid 36306186
- uniprot A0A803N882
Descriptions
- Description DCL4: Dicer-like protein 4
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006268 | ISO | PLAZA Integrative Orthology | DNA unwinding involved in DNA replication | AT2G07690 |
| GO:0032508 | IEA | GOA Database | DNA duplex unwinding | |
| GO:0032508 | IEA | InterPro | DNA duplex unwinding | |
| GO:0006396 | IEA | GOA Database | RNA processing | |
| GO:0006396 | IEA | InterPro | RNA processing | |
| GO:0006270 | IEA | GOA Database | DNA replication initiation | |
| GO:0006270 | IEA | InterPro | DNA replication initiation | |
| GO:0006260 | IEA | GOA Database | DNA replication | |
| GO:0090502 | IEA | GOA Database | RNA phosphodiester bond hydrolysis, endonucleolytic | |
| GO:0090501 | IEA | GOA Database | RNA phosphodiester bond hydrolysis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003688 | IEA | GOA Database | DNA replication origin binding | |
| GO:0003688 | IEA | InterPro | DNA replication origin binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016891 | IEA | GOA Database | endoribonuclease activity, producing 5'-phosphomonoesters | |
| GO:0004525 | IEA | GOA Database | ribonuclease III activity | |
| GO:0004525 | IEA | InterPro | ribonuclease III activity | |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000785 | ISO | PLAZA Integrative Orthology | chromatin | AT2G07690 |
| GO:0000347 | ISO | PLAZA Integrative Orthology | THO complex | AT2G07690 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT2G07690 |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0042555 | IEA | GOA Database | MCM complex | |
| GO:0042555 | IEA | InterPro | MCM complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000999 | Ribonuclease III domain |
| IPR001208 | MCM domain |
| IPR038248 | Dicer dimerisation domain superfamily |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR031327 | Mini-chromosome maintenance protein |
| IPR036389 | Ribonuclease III, endonuclease domain superfamily |
| IPR012340 | Nucleic acid-binding, OB-fold |
| IPR011545 | DEAD/DEAH box helicase domain |
| IPR027925 | MCM N-terminal domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR003100 | PAZ domain |
| IPR033762 | MCM OB domain |
| IPR008048 | DNA replication licensing factor Mcm5 |
| IPR001650 | Helicase, C-terminal |
| IPR014720 | Double-stranded RNA-binding domain |
| IPR041562 | MCM, AAA-lid domain |
| Mapman id | Description |
|---|---|
| 13.2.1.2.4 | Cell cycle organisation.DNA replication.preinitiation.MCM replicative DNA helicase complex.component MCM5 |
| 16.9.1.3 | RNA processing.mRNA silencing.transacting siRNA pathway.endoribonuclease (DCL4) |
| 16.9.1.4.2 | RNA processing.mRNA silencing.transacting siRNA pathway.DRB4-DRB7.1 dsRNA-binding regulator complex.component DRB7 |