Gene: MELO3C010254.2

General Information

Structural Information

  • Species Cucumis melo
  • Gene Identifier MELO3C010254.2
  • Transcript Identifier MELO3C010254.2.1
  • Gene Type Coding gene
  • Location chr02 : 15961489-15978803 : negative

Gene Family Information

  • ID HOM05D000399
  • #Genes/#Species 1254/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid MELO3C010254.2.1
  • uniprot A0A1S3B9W6

Descriptions

  • Description dicer-like protein 4 isoform X1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010267
ISO
PLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interference AT5G20320
GO:0010216
ISO
PLAZA Integrative Orthologymaintenance of DNA methylation AT5G20320
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus AT5G20320
GO:0010599
ISO
PLAZA Integrative Orthologyproduction of lsiRNA involved in RNA interference AT5G20320
GO:0009616
ISO
PLAZA Integrative OrthologyRNAi-mediated antiviral immune response AT5G20320
GO:0051214
ISO
PLAZA Integrative OrthologyRNAi-mediated antiviral immunity against RNA virus AT5G20320
GO:0009944
ISO
PLAZA Integrative Orthologypolarity specification of adaxial/abaxial axis Os04g0509300
GO:0006353
ISO
PLAZA Integrative OrthologyDNA-templated transcription, termination AT5G20320
GO:0010050
ISO
PLAZA Integrative Orthologyvegetative phase change AT5G20320
GO:0035196
ISO
PLAZA Integrative Orthologyproduction of miRNAs involved in gene silencing by miRNA AT5G20320
GO:0048608
ISO
PLAZA Integrative Orthologyreproductive structure development Os04g0509300
GO:0010492
ISO
PLAZA Integrative Orthologymaintenance of shoot apical meristem identity Os04g0509300
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0031047
IEA
GOA Databasegene silencing by RNA
GO:0090502
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, endonucleolytic
GO:0090501
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004525
IEA
GOA Databaseribonuclease III activity
GO:0004525
IEA
InterProribonuclease III activity
GO:0005515
IEA
InterProprotein binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0016891
IEA
GOA Databaseendoribonuclease activity, producing 5'-phosphomonoesters
GO:0004386
IEA
GOA Databasehelicase activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003723
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G20320

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR011545 DEAD/DEAH box helicase domain
IPR000999 Ribonuclease III domain
IPR036389 Ribonuclease III, endonuclease domain superfamily
IPR003100 PAZ domain
IPR001650 Helicase, C-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR038248 Dicer dimerisation domain superfamily
IPR014720 Double-stranded RNA-binding domain
Mapman id Description
16.9.1.3 RNA processing.mRNA silencing.transacting siRNA pathway.endoribonuclease (DCL4)
16.9.1.4.2 RNA processing.mRNA silencing.transacting siRNA pathway.DRB4-DRB7.1 dsRNA-binding regulator complex.component DRB7