Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g05737 Nelumbo nucifera HOM05D005550 ORTHO05D006679 3.7e-32 141.0 72 100.0
Nn1g05728 Nelumbo nucifera HOM05D005550 ORTHO05D006679 1.4e-28 129.0 63 100.0
CSS0014382 Camellia sinensis var. sinensis HOM05D005550 ORTHO05D006679 3.1e-15 84.7 57 77.2
Cpa.g.sc29.180 Carica papaya HOM05D005550 ORTHO05D006679 6.9e-15 83.6 57 73.7
Actinidia02146 Actinidia chinensis HOM05D005550 ORTHO05D006679 9.0e-15 83.2 57 75.4
Aqoxy7G00819 Aquilegia oxysepala HOM05D005550 ORTHO05D006679 9.0e-15 83.2 57 73.7
TAR375G0818 Trochodendron aralioides HOM05D005550 ORTHO05D006679 9.0e-15 83.2 57 75.4
Nn6g33903 Nelumbo nucifera HOM05D005550 ORTHO05D006679 1.2e-14 82.8 55 76.4
Sc22g0000960 Simmondsia chinensis HOM05D005550 ORTHO05D006679 1.2e-14 82.8 57 73.7
CANSAT21G2208 Cannabis sativa HOM05D005550 ORTHO05D006679 1.5e-14 82.4 57 73.7
Thecc.03G248800 Theobroma cacao HOM05D005550 ORTHO05D006679 1.5e-14 82.4 57 73.7
Hma1.2p1_1136F.1_g260510 Hydrangea macrophylla HOM05D005550 ORTHO05D006679 2.0e-14 82.0 57 73.7
Hma1.2p1_1136F.1_g260520 Hydrangea macrophylla HOM05D005550 ORTHO05D006679 2.0e-14 82.0 57 73.7
Medtr5g012900 Medicago truncatula HOM05D005550 ORTHO05D006679 2.0e-14 82.0 51 78.4
Hund11605 Selenicereus undatus HOM05D005550 ORTHO05D006679 2.0e-14 82.0 57 73.7
HanXRQChr06g0164431 Helianthus annuus HOM05D005550 ORTHO05D006679 2.6e-14 81.6 57 73.7
Lj2g0021636 Lotus japonicus HOM05D005550 ORTHO05D006679 2.6e-14 81.6 51 76.5
ClCG01G004190 Citrullus lanatus HOM05D005550 ORTHO05D006679 3.4e-14 81.3 57 71.9
Lj2C221G5 Lonicera japonica HOM05D005550 ORTHO05D006679 3.4e-14 81.3 57 73.7
MBI04_g09523_MAGBIO Magnolia biondii HOM05D005550 ORTHO05D006679 3.4e-14 81.3 57 73.7
Nitab4.5_0000712g0130 Nicotiana tabacum HOM05D005550 ORTHO05D006679 3.4e-14 81.3 62 69.4
Sed0012504 Sechium edule HOM05D005550 ORTHO05D006679 3.4e-14 81.3 57 71.9
vmacro00189 Vaccinium macrocarpon HOM05D005550 ORTHO05D006679 3.4e-14 81.3 57 75.4
Ca_24591_v3 Cicer arietinum L. HOM05D005550 ORTHO05D006679 4.5e-14 80.9 51 76.5
COL.COLO4_37144 Corchorus olitorius HOM05D005550 ORTHO05D006679 5.9e-14 80.5 57 73.7
Haze_16325 Corylus avellana HOM05D005550 ORTHO05D006679 5.9e-14 80.5 57 73.7
ECA248G1640 Erigeron canadensis HOM05D005550 ORTHO05D006679 5.9e-14 80.5 57 71.9
PSO063G2362 Papaver somniferum HOM05D005550 ORTHO05D006679 5.9e-14 80.5 57 73.7
PSO782G0795 Papaver somniferum HOM05D005550 ORTHO05D006679 5.9e-14 80.5 57 73.7
PGR042G2104 Punica granatum HOM05D005550 ORTHO05D006679 5.9e-14 80.5 57 71.9
QL12p011636 Quercus lobata HOM05D005550 ORTHO05D006679 5.9e-14 80.5 57 73.7
AL7G37330 Arabidopsis lyrata HOM05D005550 ORTHO05D006679 7.7e-14 80.1 57 71.9
AT4G17380 Arabidopsis thaliana HOM05D005550 ORTHO05D006679 7.7e-14 80.1 57 71.9
Duzib068G0290 Durio zibethinus HOM05D005550 ORTHO05D006679 7.7e-14 80.1 57 71.9
Thhalv10024454m.g Eutrema salsugineum HOM05D005550 ORTHO05D006679 7.7e-14 80.1 57 71.9
Glyma.11G034600 Glycine max HOM05D005550 ORTHO05D006679 7.7e-14 80.1 55 72.7
Gohir.D12G218532 Gossypium hirsutum HOM05D005550 ORTHO05D006679 7.7e-14 80.1 57 71.9
Gorai.008G234100 Gossypium raimondii HOM05D005550 ORTHO05D006679 7.7e-14 80.1 57 71.9
Nitab4.5_0002225g0010 Nicotiana tabacum HOM05D005550 ORTHO05D006679 7.7e-14 80.1 62 67.7
Os07g0486000 Oryza sativa ssp. japonica HOM05D005550 ORTHO05D006679 7.7e-14 80.1 61 67.2
Carub.0007s2403 Capsella rubella HOM05D005550 ORTHO05D006679 1.0e-13 79.7 57 71.9
CARHR223990 Cardamine hirsuta HOM05D005550 ORTHO05D006679 1.0e-13 79.7 57 70.2
MELO3C005519.2 Cucumis melo HOM05D005550 ORTHO05D006679 1.0e-13 79.7 57 71.9
Phvul.002G057100 Phaseolus vulgaris HOM05D005550 ORTHO05D006679 1.0e-13 79.7 51 76.5
Rhsim11G0009700 Rhododendron simsii HOM05D005550 ORTHO05D006679 1.0e-13 79.7 57 71.9
VMungo1215G0570 Vigna mungo HOM05D005550 ORTHO05D006679 1.0e-13 79.7 51 76.5
TPR.G18117 Trifolium pratense HOM05D005550 ORTHO05D006679 1.3e-13 79.3 51 74.5
Atru.chr9.1288 Acer truncatum HOM05D005550 ORTHO05D006679 1.7e-13 79.0 57 71.9
BcaB04g18410 Brassica carinata HOM05D005550 ORTHO05D006679 1.7e-13 79.0 57 71.9
BcaC07g38064 Brassica carinata HOM05D005550 ORTHO05D006679 1.7e-13 79.0 57 71.9
BcaC07g38067 Brassica carinata HOM05D005550 ORTHO05D006679 1.7e-13 79.0 57 71.9
BolC8t48465H Brassica oleracea HOM05D005550 ORTHO05D006679 1.7e-13 79.0 57 71.9
BolC8t48469H Brassica oleracea HOM05D005550 ORTHO05D006679 1.7e-13 79.0 57 71.9
CiPaw.11G081300 Carya illinoinensis HOM05D005550 ORTHO05D006679 1.7e-13 79.0 57 73.7
Psat2g176640 Pisum sativum HOM05D005550 ORTHO05D006679 1.7e-13 79.0 51 74.5
Aa31LG6G120 Aethionema arabicum HOM05D005550 ORTHO05D006679 2.2e-13 78.6 57 71.9
ATR0057G027 Amborella trichopoda HOM05D005550 ORTHO05D006679 2.2e-13 78.6 57 70.2
RcHm_v2.0_Chr7g0203731 Rosa chinensis HOM05D005550 ORTHO05D006679 2.2e-13 78.6 60 70.0
CsaV3_5G004390 Cucumis sativus L. HOM05D005550 ORTHO05D006679 2.9e-13 78.2 57 70.2
Lsat_1_v5_gn_3_1200 Lactuca sativa HOM05D005550 ORTHO05D006679 2.9e-13 78.2 49 77.6
Potri.001G156200 Populus trichocarpa HOM05D005550 ORTHO05D006679 2.9e-13 78.2 57 70.2
TWI15G1253 Tripterygium wilfordii HOM05D005550 ORTHO05D006679 2.9e-13 78.2 57 70.2
GSVIVG01004726001 Vitis vinifera HOM05D005550 ORTHO05D006679 2.9e-13 78.2 57 71.9
Ciclev10018920m.g Citrus clementina HOM05D005550 ORTHO05D006679 3.8e-13 77.8 57 70.2
Cc08_g12230 Coffea canephora HOM05D005550 ORTHO05D006679 3.8e-13 77.8 57 70.2
arahy.Tifrunner.gnm1.ann1.7NLF36 Arachis hypogaea HOM05D005550 ORTHO05D006679 5.0e-13 77.4 51 74.5
arahy.Tifrunner.gnm1.ann1.XE7N8H Arachis hypogaea HOM05D005550 ORTHO05D006679 5.0e-13 77.4 51 74.5
FvH4_5g19230 Fragaria vesca HOM05D005550 ORTHO05D006679 5.0e-13 77.4 60 68.3
FAN04G3230 Fragaria x ananassa HOM05D005550 ORTHO05D006679 5.0e-13 77.4 60 68.3
FAN08G0299 Fragaria x ananassa HOM05D005550 ORTHO05D006679 5.0e-13 77.4 60 68.3
FAN18G0162 Fragaria x ananassa HOM05D005550 ORTHO05D006679 5.0e-13 77.4 60 68.3
SHI20465 Sapria himalayana HOM05D005550 ORTHO05D006679 5.0e-13 77.4 57 70.2
Solyc08g007330.3 Solanum lycopersicum HOM05D005550 ORTHO05D006679 5.0e-13 77.4 60 68.3
Sopen08g003270 Solanum pennellii HOM05D005550 ORTHO05D006679 5.0e-13 77.4 60 68.3
A08p13130 Brassica napus HOM05D005550 ORTHO05D006679 6.5e-13 77.0 57 70.2
BraA08t33293Z Brassica rapa HOM05D005550 ORTHO05D006679 6.5e-13 77.0 57 70.2
Sabra01G0134700 Salix brachista HOM05D005550 ORTHO05D006679 8.5e-13 76.6 62 62.9
THA.LOC104812808 Tarenaya hassleriana HOM05D005550 ORTHO05D006679 8.5e-13 76.6 57 68.4
Migut.A01122 Erythranthe guttata HOM05D005550 ORTHO05D006679 1.1e-12 76.3 57 70.2
Lalb_Chr16g0379511 Lupinus albus HOM05D005550 ORTHO05D006679 1.1e-12 76.3 51 72.5
Prupe.5G066100 Prunus persica HOM05D005550 ORTHO05D006679 1.1e-12 76.3 60 68.3
SEGI_18944 Sequoiadendron giganteum HOM05D005550 ORTHO05D006679 1.4e-12 75.9 58 65.5
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 2.5e-12 75.1 61 65.6
EL10Ac5g12365 Beta vulgaris HOM05D005550 ORTHO05D006679 3.2e-12 74.7 57 70.2
AUR62007105 Chenopodium quinoa HOM05D005550 ORTHO05D006679 3.2e-12 74.7 57 70.2
AUR62019968 Chenopodium quinoa HOM05D005550 ORTHO05D006679 3.2e-12 74.7 57 70.2
unitig_744.g24475 Utricularia gibba HOM05D005550 ORTHO05D006679 3.2e-12 74.7 57 70.2
MSTRG.12114 Avicennia marina HOM05D005550 ORTHO05D006679 5.5e-12 73.9 57 70.2
Eucgr.E00409 Eucalyptus grandis HOM05D005550 ORTHO05D006679 7.2e-12 73.6 57 66.7
HPP92_025386 Vanilla planifolia HOM05D005550 ORTHO05D006679 7.2e-12 73.6 52 71.2
Peaxi162Scf00102g01071 Petunia axillaris HOM05D005550 ORTHO05D006679 2.1e-11 72.0 51 72.5
SGA_v2.0_scaffold104G30171 Striga asiatica HOM05D005550 ORTHO05D006679 3.6e-11 71.2 57 66.7
Mapoly0001s0167 Marchantia polymorpha HOM05D005550 ORTHO05D006679 1.8e-10 68.9 57 61.4
SMO340G0170 Selaginella moellendorffii HOM05D005550 ORTHO05D006679 5.1e-10 67.4 51 60.8
AagrBONN_evm.TU.Sc2ySwM_344.184 Anthoceros agrestis HOM05D005550 ORTHO05D006679 1.1e-09 66.2 55 56.4
Pp3c2_940 Physcomitrium patens HOM05D005550 ORTHO05D006679 4.3e-09 64.3 58 55.2


User provided reference genes

Program Settings