Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 8.5e-117 423.7 216 100.0
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 1.7e-101 372.9 207 92.8
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 4.1e-87 325.1 203 81.3
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 7.0e-87 324.3 203 80.3
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 4.5e-86 321.6 203 81.8
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 4.5e-86 321.6 203 79.8
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 3.8e-85 318.5 203 80.3
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 3.7e-56 222.2 212 58.0
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 5.1e-53 211.8 206 57.3
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 9.5e-52 207.6 213 56.3
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 2.8e-51 206.1 204 55.9
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 8.1e-51 204.5 209 55.5
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 4.0e-50 202.2 208 55.3
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 5.2e-50 201.8 212 53.8
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 6.8e-50 201.4 208 54.8
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 8.9e-50 201.1 205 54.1
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 8.9e-50 201.1 207 56.0
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 8.9e-50 201.1 175 57.7
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 3.4e-49 199.1 212 53.8
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 7.6e-49 198.0 206 53.4
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 1.3e-48 197.2 206 51.9
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 2.2e-48 196.4 203 52.2
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 3.8e-48 195.7 205 54.6
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 3.8e-48 195.7 205 53.7
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 3.8e-48 195.7 193 55.4
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 6.4e-48 194.9 207 51.7
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 1.1e-47 194.1 209 53.6
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 4.1e-47 192.2 209 50.7
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 7.1e-47 191.4 208 51.4
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 7.1e-47 191.4 208 51.4
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 6.0e-46 188.3 200 53.5
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 1.1e-44 184.1 203 50.7
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 2.5e-44 183.0 207 50.7
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 5.6e-44 181.8 209 50.7
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 5.6e-44 181.8 208 52.4
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 2.8e-43 179.5 208 46.6
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 2.8e-43 179.5 212 48.1
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 8.1e-43 177.9 212 49.1
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 8.1e-43 177.9 204 51.0
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 1.8e-42 176.8 215 48.8
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 1.8e-42 176.8 213 46.5
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 1.8e-42 176.8 206 48.1
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 2.4e-42 176.4 209 48.3
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 3.1e-42 176.0 201 47.8
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 8.9e-42 174.5 211 48.3
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 1.2e-41 174.1 195 49.2
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 2.0e-41 173.3 208 47.6
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 2.6e-41 172.9 213 48.8
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 9.9e-41 171.0 205 47.8
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 9.9e-41 171.0 207 46.4
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 1.3e-40 170.6 207 49.3
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 2.9e-40 169.5 212 46.2
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 3.8e-40 169.1 214 47.2
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 6.4e-40 168.3 195 48.7
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 6.4e-40 168.3 205 47.3
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 6.4e-40 168.3 206 49.5
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 8.4e-40 167.9 206 50.0
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 1.1e-39 167.5 204 46.6
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 1.4e-39 167.2 210 48.1
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 1.9e-39 166.8 212 43.9
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 3.2e-39 166.0 209 44.5
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 3.2e-39 166.0 214 47.2
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 4.2e-39 165.6 206 44.2
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 7.1e-39 164.9 204 46.1
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 1.6e-38 163.7 211 45.5
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 1.6e-38 163.7 218 46.3
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 2.7e-38 162.9 211 46.0
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 4.6e-38 162.2 205 46.8
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 6.0e-38 161.8 205 46.8
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 7.8e-38 161.4 200 48.5
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 1.3e-37 160.6 156 54.5
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 1.7e-37 160.2 204 44.6
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 2.3e-37 159.8 203 45.8
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 3.0e-37 159.5 197 44.2
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 3.9e-37 159.1 203 45.8
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 6.6e-37 158.3 189 43.9
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 8.7e-37 157.9 202 46.0
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 1.1e-36 157.5 208 42.8
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 1.9e-36 156.8 209 43.5
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 1.9e-36 156.8 228 42.5
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 3.3e-36 156.0 209 44.5
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 5.6e-36 155.2 203 45.3
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 9.6e-36 154.5 202 44.6
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 9.6e-36 154.5 205 44.4
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 1.3e-35 154.1 203 44.8
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 1.3e-35 154.1 203 44.8
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 2.1e-35 153.3 187 48.1
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 1.1e-34 151.0 202 45.5
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 2.9e-32 142.9 248 36.7
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 4.9e-32 142.1 155 51.6
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 7.1e-31 138.3 198 40.9
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 1.9e-28 130.2 249 36.9
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 3.3e-28 129.4 219 41.1
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 1.6e-27 127.1 195 40.5
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 6.2e-27 125.2 268 33.2
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 6.9e-26 121.7 216 37.0
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 4.6e-22 109.0 100 55.0
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 1.0e-21 107.8 210 36.2
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 3.0e-21 106.3 145 41.4
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 4.8e-19 99.0 175 32.0
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 1.2e-17 94.4 162 33.3
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 4.2e-15 85.9 163 31.9
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 6.3e-11 72.0 103 35.0
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 7.9e-06 55.1 75 41.3


User provided reference genes

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