Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0011099g0070 Nicotiana tabacum HOM05D000216 ORTHO05D000634 5.6e-62 240.7 119 100.0
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 1.7e-50 202.6 128 81.2
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.9e-50 201.8 128 82.0
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.9e-50 201.8 128 82.0
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.9e-50 201.8 128 82.0
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.9e-50 201.8 128 82.0
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.9e-50 201.8 128 82.0
Nitab4.5_0005637g0010 Nicotiana tabacum HOM05D000216 ORTHO05D000634 5.4e-49 197.6 126 80.2
Solyc01g017420.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.4e-41 172.2 126 71.4
CAN.G939.14 Capsicum annuum HOM05D000216 ORTHO05D000634 2.1e-40 169.1 109 80.7
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 6.7e-39 164.1 128 67.2
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 6.7e-39 164.1 128 67.2
Nitab4.5_0001761g0170 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.5e-38 162.2 119 73.1
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 3.1e-36 155.2 129 62.8
Nn3g18112 Nelumbo nucifera HOM05D000216 ORTHO05D000634 1.5e-35 152.9 129 62.8
Nitab4.5_0000172g0280 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.2e-34 149.1 116 70.7
HanXRQChr00c0300g0573171 Helianthus annuus HOM05D000216 ORTHO05D000634 4.2e-33 144.8 130 61.5
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 4.2e-33 144.8 130 61.5
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 4.2e-33 144.8 130 61.5
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 4.2e-33 144.8 130 61.5
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 5.5e-33 144.4 128 59.4
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 1.8e-31 139.4 128 57.0
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 1.8e-31 139.4 128 57.0
BraSC151t45695Z Brassica rapa HOM05D000216 ORTHO05D000634 1.8e-31 139.4 128 57.0
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 1.8e-31 139.4 127 56.7
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 8.7e-31 137.1 128 56.2
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 8.7e-31 137.1 128 56.2
HanXRQChr14g0436631 Helianthus annuus HOM05D000216 ORTHO05D000634 8.7e-31 137.1 123 61.8
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 1.9e-30 136.0 128 55.5
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 2.5e-30 135.6 128 60.2
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 3.7e-29 131.7 127 55.9
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.1e-28 130.2 130 55.4
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 1.2e-27 126.7 130 53.8
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 1.5e-27 126.3 130 54.6
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 4.5e-27 124.8 126 55.6
Medtr3g450720 Medicago truncatula HOM05D000216 ORTHO05D000634 3.2e-25 118.6 128 49.2
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 3.2e-25 118.6 128 49.2
CARHR281920 Cardamine hirsuta HOM05D000216 ORTHO05D000634 7.2e-25 117.5 120 55.0
Nitab4.5_0003361g0070 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.6e-24 116.3 120 55.0
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 6.1e-24 114.4 87 64.4
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 1.0e-23 113.6 132 50.0
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-22 110.2 125 50.4
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-22 110.2 125 50.4
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-22 110.2 125 50.4
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-22 110.2 125 50.4
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-22 110.2 125 50.4
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-22 110.2 125 50.4
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-22 110.2 125 50.4
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-22 110.2 125 50.4
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-22 110.2 125 50.4
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-22 110.2 125 50.4
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-22 110.2 125 50.4
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-22 110.2 125 50.4
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 3.3e-22 108.6 130 47.7
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.3e-21 106.7 116 51.7
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.3e-21 106.7 116 51.7
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 1.6e-21 106.3 108 52.8
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 1.1e-20 103.6 126 42.9
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 2.4e-20 102.4 76 64.5
Gorai.008G142400 Gossypium raimondii HOM05D000216 ORTHO05D000634 3.1e-20 102.1 78 64.1
Hund07969 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.1e-20 102.1 125 48.0
Zm00001eb271610 Zea mays HOM05D000216 ORTHO05D000634 4.1e-20 101.7 126 42.9
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 1.5e-19 99.8 87 52.9
SGA_v2.0_scaffold119G32687 Striga asiatica HOM05D000216 ORTHO05D000634 2.0e-19 99.4 103 54.4
GSVIVG01034287001 Vitis vinifera HOM05D000216 ORTHO05D000634 3.4e-19 98.6 67 71.6
HanXRQChr14g0455011 Helianthus annuus HOM05D000216 ORTHO05D000634 7.7e-19 97.4 78 64.1
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 2.2e-18 95.9 73 67.1
ECA169G0008 Erigeron canadensis HOM05D000216 ORTHO05D000634 2.2e-18 95.9 73 67.1
Gohir.D12G131101 Gossypium hirsutum HOM05D000216 ORTHO05D000634 2.2e-18 95.9 78 61.5
ClCG07G007330 Citrullus lanatus HOM05D000216 ORTHO05D000634 5.5e-17 91.3 109 46.8
Solyc03g095380.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 5.5e-17 91.3 69 71.0
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 4.6e-16 88.2 119 42.9
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 1.8e-15 86.3 92 51.1
BraSC143t45682Z Brassica rapa HOM05D000216 ORTHO05D000634 5.1e-15 84.7 87 54.0
BraSC58t46406Z Brassica rapa HOM05D000216 ORTHO05D000634 5.1e-15 84.7 87 54.0
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 1.5e-14 83.2 130 43.8
Hund15943 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.0e-14 82.8 76 55.3
EL10Ac6g14564 Beta vulgaris HOM05D000216 ORTHO05D000634 4.3e-14 81.6 113 41.6
Hund31462 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.4e-14 80.9 63 61.9
TPR.G1481 Trifolium pratense HOM05D000216 ORTHO05D000634 7.4e-14 80.9 61 62.3
Solyc08g028930.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.3e-13 80.1 72 63.9
Gohir.A09G101340 Gossypium hirsutum HOM05D000216 ORTHO05D000634 3.7e-13 78.6 61 63.9
CsaV3_UNG207810 Cucumis sativus L. HOM05D000216 ORTHO05D000634 2.4e-12 75.9 91 47.3
Nitab4.5_0000502g0040 Nicotiana tabacum HOM05D000216 ORTHO05D000634 4.5e-11 71.6 83 53.0
Migut.D01341 Erythranthe guttata HOM05D000216 ORTHO05D000634 2.2e-10 69.3 128 39.8
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 2.9e-10 68.9 117 38.5
CsaV3_5G013200 Cucumis sativus L. HOM05D000580 ORTHO05D001488 5.0e-10 68.2 53 64.2
CAN.G386.8 Capsicum annuum HOM05D000216 ORTHO05D001131 1.4e-09 66.6 53 69.8
Solyc08g028920.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.4e-09 66.6 36 80.6
Migut.M00502 Erythranthe guttata HOM05D000216 ORTHO05D000634 9.4e-09 63.9 97 41.2
Oeu012803.1 Olea europaea HOM05D000216 ORTHO05D000634 9.4e-09 63.9 65 55.4
C02p44110 Brassica napus HOM05D000216 ORTHO05D000634 2.7e-08 62.4 72 51.4
BraSC151t45703Z Brassica rapa HOM05D000216 ORTHO05D000634 7.9e-08 60.8 71 49.3
Oeu045561.1 Olea europaea HOM05D000216 ORTHO05D000634 3.0e-07 58.9 66 51.5
Lsat_1_v5_gn_9_5941 Lactuca sativa HOM05D000216 ORTHO05D000634 6.7e-07 57.8 74 48.6
Migut.D01415 Erythranthe guttata HOM05D000216 ORTHO05D000634 4.4e-06 55.1 108 38.9
Lj2C1237G1 Lonicera japonica HOM05D000216 ORTHO05D000634 4.4e-06 55.1 36 66.7
Lalb_Chr04g0260931 Lupinus albus HOM05D000216 ORTHO05D002552 4.4e-06 55.1 81 40.7
Hma1.2p1_0094F.1_g047104 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 7.4e-06 54.3 33 84.8


User provided reference genes

Program Settings