Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009028g0030 Nicotiana tabacum HOM05D006570 ORTHO05D008193 5.9e-294 1013.4 512 100.0
Nitab4.5_0005967g0010 Nicotiana tabacum HOM05D006570 ORTHO05D008193 4.2e-247 857.8 494 90.7
Sopen09g012610 Solanum pennellii HOM05D006570 ORTHO05D008193 1.7e-208 729.6 521 75.4
Solyc09g018850.3 Solanum lycopersicum HOM05D006570 ORTHO05D008193 8.5e-208 727.2 522 75.3
Peaxi162Scf12724g00014 Petunia axillaris HOM05D006570 ORTHO05D008193 1.9e-207 726.1 527 75.5
PGSC0003DMG400020287 Solanum tuberosum HOM05D006570 ORTHO05D008193 1.4e-205 719.9 487 79.1
CAN.G3.13 Capsicum annuum HOM05D006570 ORTHO05D008193 6.3e-179 631.3 408 81.1
Dinv28772 Davidia involucrata HOM05D006570 ORTHO05D008193 9.8e-164 580.9 541 60.6
Actinidia11648 Actinidia chinensis HOM05D006570 ORTHO05D008193 4.9e-163 578.6 529 59.9
Lj2A1109T67 Lonicera japonica HOM05D006570 ORTHO05D008193 2.4e-162 576.2 480 65.4
vmacro02851 Vaccinium macrocarpon HOM05D006570 ORTHO05D008193 2.3e-157 559.7 462 64.9
Hma1.2p1_0834F.1_g225720 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 1.3e-155 553.9 423 67.6
SalBow6G3933 Salvia bowleyana HOM05D006570 ORTHO05D008193 4.6e-153 545.4 440 64.3
Migut.D00755 Erythranthe guttata HOM05D006570 ORTHO05D008193 2.3e-152 543.1 470 62.3
SalBow2G2795 Salvia bowleyana HOM05D006570 ORTHO05D008193 3.0e-152 542.7 440 63.9
Cc01_g15710 Coffea canephora HOM05D006570 ORTHO05D008193 1.6e-150 537.0 503 59.6
Oeu020442.2 Olea europaea HOM05D006570 ORTHO05D008193 4.7e-150 535.4 477 60.2
Atru.chr6.3468 Acer truncatum HOM05D006570 ORTHO05D008193 2.4e-146 523.1 443 62.5
TAR362G0032 Trochodendron aralioides HOM05D006570 ORTHO05D008193 2.4e-146 523.1 461 61.6
HanXRQChr16g0508391 Helianthus annuus HOM05D006570 ORTHO05D008193 9.2e-146 521.2 469 59.1
Duzib133G0843 Durio zibethinus HOM05D006570 ORTHO05D008193 6.0e-145 518.5 462 60.6
Potri.014G198000 Populus trichocarpa HOM05D006570 ORTHO05D008193 3.0e-144 516.2 490 56.9
TWI18G1431 Tripterygium wilfordii HOM05D006570 ORTHO05D008193 7.3e-143 511.5 465 57.8
Haze_04512 Corylus avellana HOM05D006570 ORTHO05D008193 9.6e-143 511.1 441 61.5
Manes.13G058200 Manihot esculenta HOM05D006570 ORTHO05D008193 3.6e-142 509.2 469 58.4
CiPaw.07G077200 Carya illinoinensis HOM05D006570 ORTHO05D008193 4.7e-142 508.8 462 60.4
Cfa006298 Carpinus fangiana HOM05D006570 ORTHO05D008193 1.1e-141 507.7 441 61.2
ECA236G3480 Erigeron canadensis HOM05D006570 ORTHO05D008193 1.4e-141 507.3 474 58.0
Glyma.07G059700 Glycine max HOM05D006570 ORTHO05D008193 5.2e-141 505.4 450 60.4
Prupe.6G214800 Prunus persica HOM05D006570 ORTHO05D008193 5.2e-141 505.4 442 60.2
FvH4_3g28500 Fragaria vesca HOM05D006570 ORTHO05D008193 8.9e-141 504.6 505 56.0
Gohir.D07G093500 Gossypium hirsutum HOM05D006570 ORTHO05D008193 8.9e-141 504.6 453 59.6
Gorai.001G100200 Gossypium raimondii HOM05D006570 ORTHO05D008193 8.9e-141 504.6 453 59.6
Thecc.01G203700 Theobroma cacao HOM05D006570 ORTHO05D008193 1.5e-140 503.8 455 60.4
GSVIVG01004124001 Vitis vinifera HOM05D006570 ORTHO05D008193 3.4e-140 502.7 482 58.9
RcHm_v2.0_Chr5g0052821 Rosa chinensis HOM05D006570 ORTHO05D008193 1.7e-139 500.4 479 57.6
Lj3g0023743 Lotus japonicus HOM05D006570 ORTHO05D008193 1.4e-138 497.3 467 57.0
CANSAT01G0840 Cannabis sativa HOM05D006570 ORTHO05D008193 1.9e-138 496.9 440 58.6
COL.COLO4_19720 Corchorus olitorius HOM05D006570 ORTHO05D008193 2.4e-138 496.5 422 62.1
Gohir.A07G088500 Gossypium hirsutum HOM05D006570 ORTHO05D008193 3.2e-138 496.1 439 60.6
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 4.2e-138 495.7 422 61.6
Cpa.g.sc8.9 Carica papaya HOM05D006570 ORTHO05D008193 5.4e-138 495.4 492 56.7
Lsat_1_v5_gn_8_98640 Lactuca sativa HOM05D006570 ORTHO05D008193 9.3e-138 494.6 443 60.7
PSO170G2695 Papaver somniferum HOM05D006570 ORTHO05D008193 1.2e-137 494.2 470 56.0
Ah.11g050650 Amaranthus hybridus HOM05D006570 ORTHO05D008193 1.6e-137 493.8 439 58.8
Ciclev10015195m.g Citrus clementina HOM05D006570 ORTHO05D008193 1.6e-137 493.8 480 57.5
Aa31sc565G50 Aethionema arabicum HOM05D006570 ORTHO05D008193 2.7e-137 493.0 513 54.4
FAN21G3910 Fragaria x ananassa HOM05D006570 ORTHO05D008193 2.7e-137 493.0 500 55.8
AL9U11910 Arabidopsis lyrata HOM05D006570 ORTHO05D008193 3.5e-137 492.7 484 55.6
MD15G1141300 Malus domestica HOM05D006570 ORTHO05D008193 3.5e-137 492.7 430 62.1
Ca_23570_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 4.6e-137 492.3 439 58.8
Ca_23579_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 4.6e-137 492.3 439 58.8
MBI10_g46813_MAGBIO Magnolia biondii HOM05D006570 ORTHO05D008193 7.8e-137 491.5 519 54.1
Carub.0007s3008 Capsella rubella HOM05D006570 ORTHO05D008193 1.3e-136 490.7 459 57.3
CARHR218120 Cardamine hirsuta HOM05D006570 ORTHO05D008193 3.9e-136 489.2 461 57.3
THA.LOC104815379 Tarenaya hassleriana HOM05D006570 ORTHO05D008193 1.5e-135 487.3 453 57.6
ClCG06G001630 Citrullus lanatus HOM05D006570 ORTHO05D008193 1.9e-135 486.9 473 55.6
A04p09180 Brassica napus HOM05D006570 ORTHO05D008193 5.6e-135 485.3 509 53.2
Aqoxy7G03970 Aquilegia oxysepala HOM05D006570 ORTHO05D008193 1.3e-134 484.2 496 56.2
Thhalv10024575m.g Eutrema salsugineum HOM05D006570 ORTHO05D008193 1.3e-134 484.2 505 52.5
Medtr8g028105 Medicago truncatula HOM05D006570 ORTHO05D008193 2.1e-134 483.4 469 56.1
TPR.G5123 Trifolium pratense HOM05D006570 ORTHO05D008193 2.8e-134 483.0 441 57.6
C04p43140 Brassica napus HOM05D006570 ORTHO05D008193 3.6e-134 482.6 512 52.7
Sp7g09050 Schrenkiella parvula HOM05D006570 ORTHO05D008193 3.6e-134 482.6 480 54.6
EL10Ac5g10565 Beta vulgaris HOM05D006570 ORTHO05D008193 4.8e-134 482.3 446 57.4
BcaB03g16147 Brassica carinata HOM05D006570 ORTHO05D008193 4.8e-134 482.3 480 55.0
BcaC02g09469 Brassica carinata HOM05D006570 ORTHO05D008193 4.8e-134 482.3 477 55.8
Phvul.010G109900 Phaseolus vulgaris HOM05D006570 ORTHO05D008193 4.8e-134 482.3 474 56.3
CsaV3_6G007600 Cucumis sativus L. HOM05D006570 ORTHO05D008193 6.2e-134 481.9 456 55.7
Aqoxy1G01428 Aquilegia oxysepala HOM05D006570 ORTHO05D008193 1.1e-133 481.1 497 55.9
AT4G12740 Arabidopsis thaliana HOM05D006570 ORTHO05D008193 1.8e-133 480.3 459 56.0
VMungo0331G0798 Vigna mungo HOM05D006570 ORTHO05D008193 2.0e-132 476.9 469 56.5
CDE09G0147 Ceratophyllum demersum HOM05D006570 ORTHO05D008193 9.9e-132 474.6 474 56.1
Hund09495 Selenicereus undatus HOM05D006570 ORTHO05D008193 9.9e-132 474.6 384 62.5
AUR62032342 Chenopodium quinoa HOM05D006570 ORTHO05D008193 2.9e-131 473.0 485 54.6
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 3.8e-131 472.6 415 62.2
AUR62008045 Chenopodium quinoa HOM05D006570 ORTHO05D008193 6.4e-131 471.9 485 54.6
HPP92_007590 Vanilla planifolia HOM05D006570 ORTHO05D008193 6.4e-131 471.9 458 56.8
arahy.Tifrunner.gnm1.ann1.N5JW36 Arachis hypogaea HOM05D006570 ORTHO05D008193 8.4e-131 471.5 451 57.2
Lalb_Chr10g0100201 Lupinus albus HOM05D006570 ORTHO05D008193 2.4e-130 469.9 463 55.5
BolC4t25891H Brassica oleracea HOM05D006570 ORTHO05D008193 1.6e-129 467.2 497 53.1
Sc05g0001500 Simmondsia chinensis HOM05D006570 ORTHO05D008193 1.6e-129 467.2 420 58.8
arahy.Tifrunner.gnm1.ann1.L2UBUE Arachis hypogaea HOM05D006570 ORTHO05D008193 4.6e-129 465.7 450 56.9
Hma1.2p1_0834F.1_g225710 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 4.6e-129 465.7 375 65.6
Sabra14G0132400 Salix brachista HOM05D006570 ORTHO05D008193 2.3e-128 463.4 559 48.8
BraA04t16613Z Brassica rapa HOM05D006570 ORTHO05D008193 1.1e-127 461.1 503 51.7
AUR62028620 Chenopodium quinoa HOM05D006570 ORTHO05D008193 1.5e-127 460.7 468 55.1
PGR083G1749 Punica granatum HOM05D006570 ORTHO05D008193 4.3e-127 459.1 445 57.5
ATR0743G076 Amborella trichopoda HOM05D006570 ORTHO05D008193 9.6e-127 458.0 429 57.1
Psat4g158840 Pisum sativum HOM05D006570 ORTHO05D008193 2.8e-126 456.4 370 62.2
SHI10196 Sapria himalayana HOM05D006570 ORTHO05D008193 1.5e-119 434.1 456 52.2
MELO3C022371.2 Cucumis melo HOM05D006570 ORTHO05D008193 1.8e-117 427.2 431 53.6
Zm00001eb411200 Zea mays HOM05D006570 ORTHO05D008193 3.8e-115 419.5 491 48.7
SEGI_12299 Sequoiadendron giganteum HOM05D006570 ORTHO05D008193 2.7e-113 413.3 487 50.5
Os12g0211400 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 1.0e-112 411.4 497 47.7
Os12g0212100 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 1.9e-111 407.1 432 51.4
unitig_90.g27554 Utricularia gibba HOM05D006570 ORTHO05D008193 9.6e-111 404.8 443 50.8
Hma1.2p1_1756F.1_g301050 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 5.1e-104 382.5 325 64.0
Actinidia23139 Actinidia chinensis HOM05D006570 ORTHO05D008193 4.8e-102 375.9 470 47.9
Pp3c18_200 Physcomitrium patens HOM05D006570 ORTHO05D008193 1.7e-99 367.5 536 42.2
FAN25G2405 Fragaria x ananassa HOM05D006570 ORTHO05D008193 7.2e-98 362.1 609 40.2
Mapoly0043s0062 Marchantia polymorpha HOM05D006570 ORTHO05D008193 1.4e-93 347.8 504 40.9
Eucgr.H00676 Eucalyptus grandis HOM05D006570 ORTHO05D008193 4.7e-89 332.8 337 55.8
MBI10_g40441_MAGBIO Magnolia biondii HOM05D006570 ORTHO05D008193 5.3e-85 319.3 340 52.4
SMO202G0040 Selaginella moellendorffii HOM05D006570 ORTHO05D008193 7.2e-82 308.9 302 55.3
PRCOL_00001086 Prasinoderma coloniale HOM05D006570 ORTHO05D008193 6.8e-72 275.8 349 47.0
FAN11G0847 Fragaria x ananassa HOM05D006570 ORTHO05D008193 1.2e-68 265.0 267 54.7
MCO12G048 Micromonas commoda HOM05D006570 ORTHO05D008193 1.0e-64 251.9 516 36.2
QL01p050877 Quercus lobata HOM05D006570 ORTHO05D008193 3.0e-64 250.4 267 53.2
Cre02.g082000 Chlamydomonas reinhardtii HOM05D006570 ORTHO05D008193 2.3e-59 234.2 285 44.6
GSVIVG01038286001 Vitis vinifera HOM05D006570 ORTHO05D008193 1.9e-50 204.5 202 54.0
CSS0008113 Camellia sinensis var. sinensis HOM05D006570 ORTHO05D008193 7.3e-50 202.6 122 77.9
CSS0032158 Camellia sinensis var. sinensis HOM05D006570 ORTHO05D008193 7.3e-50 202.6 122 77.9
DCAR_012713 Daucus carota HOM05D006570 ORTHO05D008193 1.2e-44 185.3 135 65.9
Ca_29093_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 1.4e-40 171.8 317 36.6
QL01p050896 Quercus lobata HOM05D006570 ORTHO05D008193 7.5e-39 166.0 115 68.7
CDE02G1275 Ceratophyllum demersum HOM05D006570 ORTHO05D008193 3.6e-33 147.1 137 54.7
QL05p014267 Quercus lobata HOM05D006570 ORTHO05D008193 3.6e-25 120.6 190 41.1
CBR_g38520 Chara braunii HOM05D000019 ORTHO05D000048 2.0e-23 114.8 76 67.1
QL05p014599 Quercus lobata HOM05D006570 ORTHO05D008193 4.9e-22 110.2 127 49.6
PGR142G0081 Punica granatum HOM05D006570 ORTHO05D008193 2.8e-17 94.4 117 47.9
Glyma.16G028601 Glycine max HOM05D006570 ORTHO05D008193 7.6e-15 86.3 119 42.9
CBR_g38518 Chara braunii HOM05D000019 ORTHO05D000048 1.3e-11 75.5 154 31.2


User provided reference genes

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