Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0008430g0030 Nicotiana tabacum HOM05D001090 ORTHO05D006167 1.7e-108 396.0 199 100.0
Solyc01g080850.4 Solanum lycopersicum HOM05D001090 ORTHO05D006167 1.6e-40 170.2 160 63.8
Sopen01g030630 Solanum pennellii HOM05D001090 ORTHO05D006167 1.6e-40 170.2 160 63.8
CAN.G100.57 Capsicum annuum HOM05D001090 ORTHO05D006167 3.5e-40 169.1 160 65.0
Nitab4.5_0003092g0010 Nicotiana tabacum HOM05D001090 ORTHO05D006167 5.5e-38 161.8 157 63.7
Peaxi162Scf00309g00913 Petunia axillaris HOM05D001090 ORTHO05D006167 1.6e-37 160.2 161 62.7
Nitab4.5_0000222g0360 Nicotiana tabacum HOM05D001090 ORTHO05D006167 2.1e-37 159.8 158 62.7
Dinv12082 Davidia involucrata HOM05D001090 ORTHO05D006167 2.2e-31 139.8 159 54.1
Ciclev10018812m.g Citrus clementina HOM05D001090 ORTHO05D006167 1.6e-29 133.7 136 56.6
MSTRG.15096 Avicennia marina HOM05D001090 ORTHO05D006167 3.6e-29 132.5 93 78.5
Rhsim01G0000300 Rhododendron simsii HOM05D001090 ORTHO05D006167 8.0e-29 131.3 157 51.0
GSVIVG01028251001 Vitis vinifera HOM05D001090 ORTHO05D006167 1.4e-28 130.6 118 65.3
SGA_v2.0_scaffold198G41106 Striga asiatica HOM05D001090 ORTHO05D006167 4.0e-28 129.0 92 76.1
Potri.002G187100 Populus trichocarpa HOM05D001090 ORTHO05D006167 1.2e-27 127.5 155 49.0
SGA_v2.0_scaffold36G14317 Striga asiatica HOM05D001090 ORTHO05D006167 2.6e-27 126.3 92 77.2
Manes.01G235000 Manihot esculenta HOM05D001090 ORTHO05D006167 3.4e-27 125.9 160 46.2
Atru.chr5.863 Acer truncatum HOM05D001090 ORTHO05D006167 9.8e-27 124.4 136 53.7
TWI59G0772 Tripterygium wilfordii HOM05D001090 ORTHO05D006167 1.3e-26 124.0 163 50.3
Cfa004911 Carpinus fangiana HOM05D001090 ORTHO05D006167 2.2e-26 123.2 137 51.1
vmacro02360 Vaccinium macrocarpon HOM05D001090 ORTHO05D006167 2.8e-26 122.9 134 53.7
Potri.014G112600 Populus trichocarpa HOM05D001090 ORTHO05D006167 8.3e-26 121.3 136 53.7
TAR365G0940 Trochodendron aralioides HOM05D001090 ORTHO05D006167 8.3e-26 121.3 91 73.6
Gohir.D11G109400 Gossypium hirsutum HOM05D001090 ORTHO05D006167 2.4e-25 119.8 125 59.2
Gorai.007G117000 Gossypium raimondii HOM05D001090 ORTHO05D006167 3.1e-25 119.4 102 67.6
Gohir.A11G104600 Gossypium hirsutum HOM05D001090 ORTHO05D006167 1.2e-24 117.5 137 54.7
TWI23G1021 Tripterygium wilfordii HOM05D001090 ORTHO05D006167 1.2e-24 117.5 156 46.8
arahy.Tifrunner.gnm1.ann1.2022SK Arachis hypogaea HOM05D001410 ORTHO05D006167 4.5e-24 115.5 110 60.9
arahy.Tifrunner.gnm1.ann1.XGP1KG Arachis hypogaea HOM05D001090 ORTHO05D006167 4.5e-24 115.5 110 60.9
Haze_05146 Corylus avellana HOM05D001090 ORTHO05D006167 7.8e-24 114.8 140 47.9
Dinv33168 Davidia involucrata HOM05D001090 ORTHO05D006167 7.8e-24 114.8 145 53.1
Prupe.3G002800 Prunus persica HOM05D001090 ORTHO05D006167 7.8e-24 114.8 160 46.2
Sed0008475 Sechium edule HOM05D001090 ORTHO05D006167 7.8e-24 114.8 111 58.6
MD09G1290300 Malus domestica HOM05D001090 ORTHO05D006167 1.0e-23 114.4 157 45.9
Glyma.19G221300 Glycine max HOM05D001090 ORTHO05D006167 1.3e-23 114.0 117 60.7
Gohir.A12G120100 Gossypium hirsutum HOM05D001090 ORTHO05D006167 1.7e-23 113.6 125 55.2
Lj1g0021730 Lotus japonicus HOM05D001090 ORTHO05D006167 2.3e-23 113.2 118 57.6
Manes.05G009100 Manihot esculenta HOM05D001090 ORTHO05D006167 2.3e-23 113.2 137 47.4
Duzib138G0040 Durio zibethinus HOM05D001090 ORTHO05D006167 3.8e-23 112.5 161 47.2
Migut.N00921 Erythranthe guttata HOM05D001090 ORTHO05D006167 5.0e-23 112.1 104 68.3
RcHm_v2.0_Chr3g0485911 Rosa chinensis HOM05D001090 ORTHO05D006167 6.6e-23 111.7 116 58.6
FAN26G0681 Fragaria x ananassa HOM05D001090 ORTHO05D006167 8.6e-23 111.3 114 59.6
Glyma.03G224400 Glycine max HOM05D001090 ORTHO05D006167 1.5e-22 110.5 117 59.0
arahy.Tifrunner.gnm1.ann1.KI1FZN Arachis hypogaea HOM05D001090 ORTHO05D006167 1.9e-22 110.2 87 67.8
PGR142G4102 Punica granatum HOM05D001090 ORTHO05D006167 4.3e-22 109.0 115 59.1
THA.LOC104801326 Tarenaya hassleriana HOM05D001090 ORTHO05D006167 4.3e-22 109.0 115 59.1
FAN28G2823 Fragaria x ananassa HOM05D001090 ORTHO05D006167 7.3e-22 108.2 114 58.8
Thecc.01G325100 Theobroma cacao HOM05D001090 ORTHO05D006167 9.5e-22 107.8 161 46.6
FvH4_1g26250 Fragaria vesca HOM05D001090 ORTHO05D006167 1.2e-21 107.5 114 58.8
COL.COLO4_23131 Corchorus olitorius HOM05D001090 ORTHO05D006167 1.6e-21 107.1 128 54.7
Sabra14G0082800 Salix brachista HOM05D001090 ORTHO05D006167 3.6e-21 105.9 106 62.3
AT4G01810 Arabidopsis thaliana HOM05D001090 ORTHO05D006167 4.7e-21 105.5 163 44.2
MD17G1284900 Malus domestica HOM05D001090 ORTHO05D006167 6.1e-21 105.1 157 45.2
Phvul.001G218200 Phaseolus vulgaris HOM05D001090 ORTHO05D006167 6.1e-21 105.1 135 53.3
DCAR_002936 Daucus carota HOM05D001090 ORTHO05D006167 1.4e-20 104.0 70 74.3
Eucgr.K00564 Eucalyptus grandis HOM05D001090 ORTHO05D006167 1.4e-20 104.0 98 59.2
Nn4g25350 Nelumbo nucifera HOM05D001090 ORTHO05D006167 1.4e-20 104.0 99 61.6
Sc17g0000010 Simmondsia chinensis HOM05D001090 ORTHO05D006167 1.4e-20 104.0 88 64.8
FAN23G2339 Fragaria x ananassa HOM05D001090 ORTHO05D006167 2.3e-20 103.2 114 57.9
BcaC04g24072 Brassica carinata HOM05D001090 ORTHO05D006167 3.0e-20 102.8 125 52.8
BolC9t53069H Brassica oleracea HOM05D001090 ORTHO05D006167 3.0e-20 102.8 125 52.8
A09p01300 Brassica napus HOM05D001090 ORTHO05D006167 4.0e-20 102.4 125 52.8
BraA09t35795Z Brassica rapa HOM05D001090 ORTHO05D006167 4.0e-20 102.4 125 52.8
CANSAT25G3150 Cannabis sativa HOM05D001090 ORTHO05D006167 5.2e-20 102.1 93 60.2
Carub.0006s3541 Capsella rubella HOM05D001090 ORTHO05D006167 8.9e-20 101.3 165 44.2
AL6G51490 Arabidopsis lyrata HOM05D001090 ORTHO05D006167 1.2e-19 100.9 165 43.6
CARHR249790 Cardamine hirsuta HOM05D001090 ORTHO05D006167 1.5e-19 100.5 156 44.9
BcaB01g02111 Brassica carinata HOM05D001090 ORTHO05D006167 2.0e-19 100.1 125 52.8
C09p01350 Brassica napus HOM05D001090 ORTHO05D006167 2.0e-19 100.1 125 52.0
Actinidia20965 Actinidia chinensis HOM05D001410 ORTHO05D003969 5.7e-19 98.6 148 51.4
Sp6g01660 Schrenkiella parvula HOM05D001090 ORTHO05D006167 1.7e-18 97.1 133 48.1
Actinidia25871 Actinidia chinensis HOM05D001090 ORTHO05D006167 2.2e-18 96.7 149 49.0
Medtr7g110640 Medicago truncatula HOM05D001090 ORTHO05D006167 2.9e-18 96.3 78 65.4
Sabra02G0129700 Salix brachista HOM05D001090 ORTHO05D006167 2.9e-18 96.3 136 44.1
Ca_09245_v3 Cicer arietinum L. HOM05D001090 ORTHO05D006167 6.4e-18 95.1 142 45.8
Cc01_g21790 Coffea canephora HOM05D001090 ORTHO05D006167 3.2e-17 92.8 117 55.6
Oeu038075.1 Olea europaea HOM05D001090 ORTHO05D006167 4.1e-17 92.4 170 44.1
QL12p034939 Quercus lobata HOM05D001090 ORTHO05D006167 5.4e-17 92.0 141 41.8
Lsat_1_v5_gn_8_125581 Lactuca sativa HOM05D001090 ORTHO05D006167 7.0e-17 91.7 154 46.1
Lj1A8G48 Lonicera japonica HOM05D001090 ORTHO05D006167 7.0e-17 91.7 164 43.3
Psat3g016720 Pisum sativum HOM05D001090 ORTHO05D006167 2.7e-16 89.7 91 60.4
TPR.G2501 Trifolium pratense HOM05D001090 ORTHO05D006167 2.7e-16 89.7 86 59.3
Gohir.D12G123700 Gossypium hirsutum HOM05D001090 ORTHO05D006167 5.9e-16 88.6 114 50.0
Gorai.008G134800 Gossypium raimondii HOM05D001090 ORTHO05D006167 5.9e-16 88.6 114 50.0
Duzib133G1021 Durio zibethinus HOM05D001090 ORTHO05D006167 1.0e-15 87.8 161 40.4
Peaxi162Scf00197g00026 Petunia axillaris HOM05D000533 ORTHO05D001069 1.0e-15 87.8 67 64.2
VMungo1383G1946 Vigna mungo HOM05D001090 ORTHO05D006167 3.3e-14 82.8 96 56.2
Peaxi162Scf00864g00009 Petunia axillaris HOM05D000533 ORTHO05D001069 5.6e-14 82.0 43 86.0
Aqoxy5G02821 Aquilegia oxysepala HOM05D001090 ORTHO05D006167 7.3e-14 81.6 113 46.0
PSO761G0494 Papaver somniferum HOM05D001090 ORTHO05D006167 9.5e-14 81.3 127 45.7
ECA233G3948 Erigeron canadensis HOM05D001090 ORTHO05D006167 2.1e-13 80.1 133 42.9
PSO210G7365 Papaver somniferum HOM05D001090 ORTHO05D006167 3.6e-13 79.3 126 43.7
Lalb_Chr02g0147141 Lupinus albus HOM05D001090 ORTHO05D006167 8.0e-13 78.2 104 47.1
CsaV3_5G029690 Cucumis sativus L. HOM05D001090 ORTHO05D002687 1.8e-12 77.0 54 70.4
Zm00001eb340490 Zea mays HOM05D001090 ORTHO05D006167 2.3e-12 76.6 101 51.5
MELO3C011813.2 Cucumis melo HOM05D001090 ORTHO05D006167 4.0e-12 75.9 53 71.7
Aa31LG5G1560 Aethionema arabicum HOM05D001090 ORTHO05D002687 1.2e-11 74.3 164 36.0
DCAR_005717 Daucus carota HOM05D001090 ORTHO05D006167 4.4e-11 72.4 69 60.9
MBI18_g10371_MAGBIO Magnolia biondii HOM05D001410 ORTHO05D006167 1.3e-10 70.9 148 41.2
Nn3g21945 Nelumbo nucifera HOM05D001090 ORTHO05D006167 2.2e-10 70.1 159 33.3
Nitab4.5_0000658g0100 Nicotiana tabacum HOM05D009939 ORTHO05D000006 2.9e-10 69.7 38 81.6
Nitab4.5_0017902g0030 Nicotiana tabacum HOM05D009939 ORTHO05D000006 2.9e-10 69.7 38 81.6
Nitab4.5_0014136g0050 Nicotiana tabacum HOM05D009939 ORTHO05D000006 6.4e-10 68.6 38 78.9
Nitab4.5_0000031g0210 Nicotiana tabacum HOM05D009939 ORTHO05D000006 1.1e-09 67.8 38 78.9
Nitab4.5_0001607g0100 Nicotiana tabacum HOM05D009939 ORTHO05D000006 1.4e-09 67.4 53 62.3
Hund11624 Selenicereus undatus HOM05D001090 ORTHO05D006167 1.9e-09 67.0 52 69.2
Nitab4.5_0010033g0110 Nicotiana tabacum HOM05D009939 ORTHO05D000006 3.2e-09 66.2 53 62.3
Peaxi162Scf00651g00639 Petunia axillaris HOM05D009939 ORTHO05D000006 3.2e-09 66.2 38 78.9
HanXRQChr17g0555271 Helianthus annuus HOM05D001090 ORTHO05D006167 4.1e-09 65.9 126 39.7
Nitab4.5_0001023g0120 Nicotiana tabacum HOM05D002660 ORTHO05D003902 4.1e-09 65.9 37 81.1
Nitab4.5_0001796g0280 Nicotiana tabacum HOM05D009939 ORTHO05D000006 4.1e-09 65.9 38 78.9
Nitab4.5_0009256g0030 Nicotiana tabacum HOM05D009939 ORTHO05D000006 5.4e-09 65.5 38 76.3
Ah.15g091800 Amaranthus hybridus HOM05D001090 ORTHO05D006167 7.0e-09 65.1 124 42.7
HPP92_015635 Vanilla planifolia HOM05D001090 ORTHO05D006167 7.0e-09 65.1 64 56.2
Os01g0321700 Oryza sativa ssp. japonica HOM05D001090 ORTHO05D006167 2.0e-08 63.5 79 50.6
Nitab4.5_0000172g0690 Nicotiana tabacum HOM05D009939 ORTHO05D000006 1.0e-07 61.2 38 73.7
Peaxi162Scf03709g00004 Petunia axillaris HOM05D009939 ORTHO05D000006 1.3e-07 60.8 38 71.1
AUR62042130 Chenopodium quinoa HOM05D001090 ORTHO05D006167 3.9e-07 59.3 123 40.7
AUR62042131 Chenopodium quinoa HOM05D001090 ORTHO05D006167 3.9e-07 59.3 123 40.7
CDE08G1158 Ceratophyllum demersum HOM05D001090 ORTHO05D006167 8.6e-07 58.2 88 44.3
ClCG11G013170 Citrullus lanatus HOM05D001090 ORTHO05D006167 1.9e-06 57.0 136 34.6
Thhalv10028421m.g Eutrema salsugineum HOM05D001090 ORTHO05D006167 2.5e-06 56.6 134 37.3
Lalb_Chr04g0260211 Lupinus albus HOM05D001090 ORTHO05D006167 4.3e-06 55.8 160 35.0
EL10Ac7g17290 Beta vulgaris HOM05D001090 ORTHO05D006167 5.6e-06 55.5 112 42.0


User provided reference genes

Program Settings