Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007747g0010 Nicotiana tabacum HOM05D005935 ORTHO05D007012 1.6e-48 196.1 124 100.0
Nitab4.5_0000155g0010 Nicotiana tabacum HOM05D005935 ORTHO05D007012 4.1e-47 191.4 123 98.4
Peaxi162Scf00673g00126 Petunia axillaris HOM05D005935 ORTHO05D007012 2.7e-43 178.7 123 92.7
Solyc01g100330.3 Solanum lycopersicum HOM05D005935 ORTHO05D007012 6.1e-43 177.6 123 91.1
Sopen01g043840 Solanum pennellii HOM05D005935 ORTHO05D007012 6.1e-43 177.6 123 91.1
PGSC0003DMG400002806 Solanum tuberosum HOM05D005935 ORTHO05D007012 6.1e-43 177.6 123 91.1
CAN.G1715.16 Capsicum annuum HOM05D005935 ORTHO05D007012 1.5e-41 172.9 123 91.1
SalBow3G1520 Salvia bowleyana HOM05D005935 ORTHO05D007012 2.5e-41 172.2 123 89.4
Lsat_1_v5_gn_5_102820 Lactuca sativa HOM05D005935 ORTHO05D007012 3.3e-41 171.8 123 88.6
Hma1.2p1_0008F-1.1_g005750 Hydrangea macrophylla HOM05D005935 ORTHO05D007012 5.7e-41 171.0 123 87.8
Cc02_g34830 Coffea canephora HOM05D005935 ORTHO05D007012 7.4e-41 170.6 123 88.6
Dinv24425 Davidia involucrata HOM05D005935 ORTHO05D007012 9.7e-41 170.2 123 88.6
Actinidia16851 Actinidia chinensis HOM05D005935 ORTHO05D007012 3.7e-40 168.3 123 89.4
Os03g0831900 Oryza sativa ssp. japonica HOM05D005935 ORTHO05D007012 3.7e-40 168.3 125 86.4
MSTRG.27950 Avicennia marina HOM05D005935 ORTHO05D007012 4.8e-40 167.9 123 88.6
HanXRQChr10g0299201 Helianthus annuus HOM05D005935 ORTHO05D007012 4.8e-40 167.9 123 87.0
Ah.06g188880 Amaranthus hybridus HOM05D005935 ORTHO05D007012 6.3e-40 167.5 123 87.0
ECA234G4853 Erigeron canadensis HOM05D005935 ORTHO05D007012 1.1e-39 166.8 123 85.4
Gohir.A08G206600 Gossypium hirsutum HOM05D005935 ORTHO05D007012 1.1e-39 166.8 123 87.0
Gohir.D08G223300 Gossypium hirsutum HOM05D005935 ORTHO05D007012 1.1e-39 166.8 123 87.0
Gorai.004G237200 Gossypium raimondii HOM05D005935 ORTHO05D007012 1.1e-39 166.8 123 87.0
SGA_v2.0_scaffold80G25879 Striga asiatica HOM05D005935 ORTHO05D007012 1.1e-39 166.8 123 87.8
SGA_v2.0_scaffold81G26126 Striga asiatica HOM05D005935 ORTHO05D007012 1.1e-39 166.8 123 87.8
GSVIVG01031220001 Vitis vinifera HOM05D005935 ORTHO05D007012 1.8e-39 166.0 123 86.2
DCAR_005416 Daucus carota HOM05D005935 ORTHO05D007012 2.4e-39 165.6 123 87.8
vmacro01555 Vaccinium macrocarpon HOM05D005935 ORTHO05D007012 2.4e-39 165.6 124 84.7
COL.COLO4_04140 Corchorus olitorius HOM05D005935 ORTHO05D007012 3.1e-39 165.2 123 83.7
Lalb_Chr18g0046051 Lupinus albus HOM05D005935 ORTHO05D007012 3.1e-39 165.2 123 86.2
Phvul.001G225500 Phaseolus vulgaris HOM05D005935 ORTHO05D007012 3.1e-39 165.2 123 87.0
THA.LOC104802776 Tarenaya hassleriana HOM05D005935 ORTHO05D007012 4.1e-39 164.9 122 84.4
AL3G16500 Arabidopsis lyrata HOM05D005935 ORTHO05D007012 5.3e-39 164.5 122 83.6
AT3G05760 Arabidopsis thaliana HOM05D005935 ORTHO05D007012 5.3e-39 164.5 122 84.4
Glyma.03G231900 Glycine max HOM05D005935 ORTHO05D007012 5.3e-39 164.5 122 86.9
Nitab4.5_0013342g0020 Nicotiana tabacum HOM05D000001 ORTHO05D004269 5.3e-39 164.5 123 87.8
PGR031G1309 Punica granatum HOM05D005935 ORTHO05D007012 5.3e-39 164.5 122 84.4
Sed0001365 Sechium edule HOM05D005935 ORTHO05D007012 5.3e-39 164.5 123 83.7
Carub.0003s0513 Capsella rubella HOM05D005935 ORTHO05D007012 6.9e-39 164.1 122 83.6
Lalb_Chr04g0260471 Lupinus albus HOM05D005935 ORTHO05D007012 6.9e-39 164.1 123 74.8
arahy.Tifrunner.gnm1.ann1.7UDZ1N Arachis hypogaea HOM05D005935 ORTHO05D007012 9.1e-39 163.7 123 82.1
arahy.Tifrunner.gnm1.ann1.G5WI6L Arachis hypogaea HOM05D005935 ORTHO05D007012 9.1e-39 163.7 123 86.2
arahy.Tifrunner.gnm1.ann1.H1X696 Arachis hypogaea HOM05D005935 ORTHO05D007012 9.1e-39 163.7 123 86.2
arahy.Tifrunner.gnm1.ann1.I9BDFC Arachis hypogaea HOM05D005935 ORTHO05D007012 9.1e-39 163.7 123 85.4
CSS0047945 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 9.1e-39 163.7 123 86.2
Glyma.19G228900 Glycine max HOM05D005935 ORTHO05D007012 1.2e-38 163.3 122 86.1
Hund21747 Selenicereus undatus HOM05D005935 ORTHO05D007012 1.5e-38 162.9 123 85.4
Migut.N01391 Erythranthe guttata HOM05D005935 ORTHO05D007012 2.0e-38 162.5 124 87.1
MD04G1195100 Malus domestica HOM05D005935 ORTHO05D007012 2.0e-38 162.5 123 86.2
Prupe.6G314900 Prunus persica HOM05D005935 ORTHO05D007012 2.0e-38 162.5 123 86.2
Zm00001eb121760 Zea mays HOM05D005935 ORTHO05D007012 2.0e-38 162.5 124 80.6
Sp3g04650 Schrenkiella parvula HOM05D005935 ORTHO05D007012 2.6e-38 162.2 122 82.0
BolC5t34806H Brassica oleracea HOM05D002110 ORTHO05D007012 3.4e-38 161.8 122 81.1
BraA05t22944Z Brassica rapa HOM05D002110 ORTHO05D007012 3.4e-38 161.8 122 83.6
CANSAT54G1507 Cannabis sativa HOM05D005935 ORTHO05D007012 3.4e-38 161.8 123 86.2
Cpa.g.sc48.144 Carica papaya HOM05D005935 ORTHO05D007012 3.4e-38 161.8 123 84.6
RcHm_v2.0_Chr3g0456881 Rosa chinensis HOM05D005935 ORTHO05D007012 4.5e-38 161.4 123 87.0
unitig_21.g20172 Utricularia gibba HOM05D005935 ORTHO05D007012 4.5e-38 161.4 123 83.7
ClCG02G015080 Citrullus lanatus HOM05D005935 ORTHO05D007012 5.9e-38 161.0 123 83.7
MELO3C004198.2 Cucumis melo HOM05D005935 ORTHO05D007012 5.9e-38 161.0 123 83.7
CsaV3_2G006940 Cucumis sativus L. HOM05D005935 ORTHO05D007012 5.9e-38 161.0 123 83.7
Medtr7g112060 Medicago truncatula HOM05D005935 ORTHO05D007012 5.9e-38 161.0 122 83.6
TAR636G0846 Trochodendron aralioides HOM05D005935 ORTHO05D007012 5.9e-38 161.0 122 86.1
BcaC05g29782 Brassica carinata HOM05D005935 ORTHO05D007012 7.7e-38 160.6 122 79.5
TWI36G1229 Tripterygium wilfordii HOM05D005935 ORTHO05D007012 7.7e-38 160.6 124 87.1
Ca_09298_v3 Cicer arietinum L. HOM05D005935 ORTHO05D007012 1.0e-37 160.2 122 83.6
BcaC05g30089 Brassica carinata HOM05D005935 ORTHO05D007012 1.3e-37 159.8 122 81.1
AUR62000683 Chenopodium quinoa HOM05D005935 ORTHO05D007012 1.7e-37 159.5 123 84.6
AUR62005273 Chenopodium quinoa HOM05D005935 ORTHO05D007012 1.7e-37 159.5 123 84.6
QL03p018299 Quercus lobata HOM05D005935 ORTHO05D007012 1.7e-37 159.5 122 84.4
Eucgr.H03282 Eucalyptus grandis HOM05D005935 ORTHO05D007012 3.8e-37 158.3 123 82.1
Manes.09G175700 Manihot esculenta HOM05D005935 ORTHO05D007012 5.0e-37 157.9 124 87.1
MD12G1207200 Malus domestica HOM05D005935 ORTHO05D007012 6.5e-37 157.5 123 85.4
Nn3g21642 Nelumbo nucifera HOM05D005935 ORTHO05D007012 6.5e-37 157.5 123 82.1
Psat3g013040 Pisum sativum HOM05D005935 ORTHO05D007012 6.5e-37 157.5 117 84.6
Thecc.05G321000 Theobroma cacao HOM05D005935 ORTHO05D007012 6.5e-37 157.5 123 82.1
EL10Ac4g09829 Beta vulgaris HOM05D005935 ORTHO05D007012 8.5e-37 157.1 124 84.7
Sc09g0002670 Simmondsia chinensis HOM05D005935 ORTHO05D007012 8.5e-37 157.1 123 82.1
TWI56G1463 Tripterygium wilfordii HOM05D005935 ORTHO05D007012 8.5e-37 157.1 124 87.1
TAR362G1094 Trochodendron aralioides HOM05D005935 ORTHO05D007012 1.4e-36 156.4 124 84.7
VMungo1383G1193 Vigna mungo HOM05D005935 ORTHO05D007012 2.5e-36 155.6 119 84.9
CiPaw.07G028100 Carya illinoinensis HOM05D005935 ORTHO05D007012 3.2e-36 155.2 123 83.7
FAN05G5324 Fragaria x ananassa HOM05D005935 ORTHO05D007012 3.2e-36 155.2 123 83.7
SEGI_34613 Sequoiadendron giganteum HOM05D005935 ORTHO05D007012 3.2e-36 155.2 124 78.2
FvH4_6g07240 Fragaria vesca HOM05D005935 ORTHO05D007012 4.2e-36 154.8 123 83.7
FAN14G3557 Fragaria x ananassa HOM05D005935 ORTHO05D007012 4.2e-36 154.8 123 83.7
QL01p019294 Quercus lobata HOM05D005935 ORTHO05D007012 4.2e-36 154.8 122 84.4
CARHR080230 Cardamine hirsuta HOM05D005935 ORTHO05D007012 5.5e-36 154.5 123 84.6
C05p61480 Brassica napus HOM05D002110 ORTHO05D007012 9.4e-36 153.7 123 82.9
Haze_04079 Corylus avellana HOM05D005935 ORTHO05D007012 9.4e-36 153.7 122 81.1
FAN02G1619 Fragaria x ananassa HOM05D005935 ORTHO05D007012 9.4e-36 153.7 123 82.9
Lj1g0021681 Lotus japonicus HOM05D005935 ORTHO05D007012 1.2e-35 153.3 122 82.0
Thhalv10022198m.g Eutrema salsugineum HOM05D005935 ORTHO05D007012 1.6e-35 152.9 145 71.0
PSO170G3047 Papaver somniferum HOM05D005935 ORTHO05D007012 1.6e-35 152.9 123 82.9
PSO357G0321 Papaver somniferum HOM05D005935 ORTHO05D007012 1.6e-35 152.9 123 82.9
Pp3c4_20180 Physcomitrium patens HOM05D005935 ORTHO05D007012 1.6e-35 152.9 125 79.2
TPR.G1633 Trifolium pratense HOM05D005935 ORTHO05D007012 1.6e-35 152.9 122 77.9
Potri.013G010300 Populus trichocarpa HOM05D005935 ORTHO05D007012 2.7e-35 152.1 122 82.8
Aqoxy2G00839 Aquilegia oxysepala HOM05D005935 ORTHO05D007012 4.7e-35 151.4 123 82.9
ATR0767G209 Amborella trichopoda HOM05D005935 ORTHO05D007012 1.0e-34 150.2 123 82.9
Aqoxy4G02482 Aquilegia oxysepala HOM05D005935 ORTHO05D007012 1.8e-34 149.4 123 81.3
Atru.chr2.148 Acer truncatum HOM05D005935 ORTHO05D007012 3.9e-34 148.3 125 79.2
Ciclev10002528m.g Citrus clementina HOM05D005935 ORTHO05D007012 5.1e-34 147.9 124 81.5
CDE05G0147 Ceratophyllum demersum HOM05D005935 ORTHO05D007012 2.0e-33 146.0 124 83.1
PSO478G5244 Papaver somniferum HOM05D005935 ORTHO05D007012 2.0e-33 146.0 123 81.3
Aa31LG5G16170 Aethionema arabicum HOM05D005935 ORTHO05D007012 3.3e-33 145.2 122 62.3
CDE11G0767 Ceratophyllum demersum HOM05D005935 ORTHO05D007012 4.4e-33 144.8 124 82.3
Mapoly0111s0002 Marchantia polymorpha HOM05D005935 ORTHO05D007012 1.3e-32 143.3 125 76.8
CSS0009551 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 4.5e-30 134.8 116 78.4
HPP92_015241 Vanilla planifolia HOM05D005935 ORTHO05D007012 1.1e-28 130.2 123 74.8
Nitab4.5_0000368g0260 Nicotiana tabacum HOM05D005935 ORTHO05D007012 2.5e-28 129.0 122 65.6
Pp3c12_7700 Physcomitrium patens HOM05D005935 ORTHO05D007012 3.2e-28 128.6 119 76.5
Duzib128G1094 Durio zibethinus HOM05D005935 ORTHO05D007012 5.5e-28 127.9 74 81.1
FAN09G4449 Fragaria x ananassa HOM05D005935 ORTHO05D007012 1.6e-27 126.3 73 84.9
Hund07136 Selenicereus undatus HOM05D005935 ORTHO05D007012 2.1e-27 125.9 195 53.3
Lj5A336T44 Lonicera japonica HOM05D005935 ORTHO05D007012 6.1e-27 124.4 69 87.0
SMO201G0167 Selaginella moellendorffii HOM05D005935 ORTHO05D007012 5.2e-26 121.3 130 66.2
Rhsim11G0094200 Rhododendron simsii HOM05D005935 ORTHO05D007012 6.7e-26 120.9 133 53.4
AagrBONN_evm.TU.Sc2ySwM_344.1201 Anthoceros agrestis HOM05D005935 ORTHO05D007012 4.8e-24 114.8 74 70.3
Oeu013219.2 Olea europaea HOM05D005935 ORTHO05D007012 1.6e-22 109.8 96 86.5
AagrBONN_evm.TU.Sc2ySwM_228.1845 Anthoceros agrestis HOM05D005935 ORTHO05D007012 2.0e-22 109.4 71 69.0
AagrBONN_evm.TU.Sc2ySwM_368.1862 Anthoceros agrestis HOM05D005935 ORTHO05D007012 1.1e-20 103.6 58 81.0
Zm00001eb307900 Zea mays HOM05D005935 ORTHO05D007012 5.5e-20 101.3 96 77.1
Cre07.g341650 Chlamydomonas reinhardtii HOM05D005935 ORTHO05D007012 6.1e-19 97.8 127 59.8
CSS0024691 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 4.0e-18 95.1 61 82.0
RcHm_v2.0_Chr7g0179971 Rosa chinensis HOM05D005935 ORTHO05D007012 5.7e-17 91.3 60 70.0
Zm00001eb114570 Zea mays HOM05D005935 ORTHO05D007012 5.7e-17 91.3 91 76.9
Actinidia35528 Actinidia chinensis HOM05D005935 ORTHO05D007012 1.4e-15 86.7 94 77.7
MCO03G264 Micromonas commoda HOM05D005935 ORTHO05D007012 2.7e-14 82.4 129 52.7
FAN04G2955 Fragaria x ananassa HOM05D005935 ORTHO05D007012 3.5e-14 82.0 60 65.0
CSS0034550 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 7.7e-14 80.9 132 59.8
CSS0031844 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 5.5e-12 74.7 38 94.7
Zm00001eb180860 Zea mays HOM05D005935 ORTHO05D007012 2.7e-11 72.4 46 78.3
Sabra13G0008800 Salix brachista HOM05D005935 ORTHO05D007012 3.6e-11 72.0 124 38.7
PRCOL_00000245 Prasinoderma coloniale HOM05D005935 ORTHO05D007012 3.0e-10 68.9 128 43.0
CBR_g38440 Chara braunii HOM05D005935 ORTHO05D007012 1.7e-08 63.2 123 39.0


User provided reference genes

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