Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006227g0010 Nicotiana tabacum HOM05D004465 ORTHO05D005450 4.2e-107 391.3 193 100.0
Nitab4.5_0001323g0060 Nicotiana tabacum HOM05D004465 ORTHO05D005450 1.1e-54 217.2 180 64.4
Sopen09g028910 Solanum pennellii HOM05D004465 ORTHO05D005450 1.4e-54 216.9 180 61.7
Peaxi162Scf00941g00114 Petunia axillaris HOM05D004465 ORTHO05D005450 4.1e-54 215.3 179 63.1
Solyc09g074090.3 Solanum lycopersicum HOM05D004465 ORTHO05D005450 5.3e-54 214.9 180 61.7
PGSC0003DMG400003807 Solanum tuberosum HOM05D004465 ORTHO05D005450 7.0e-54 214.5 180 61.1
Nitab4.5_0002927g0060 Nicotiana tabacum HOM05D004465 ORTHO05D005450 9.1e-54 214.2 180 63.3
CAN.G956.9 Capsicum annuum HOM05D004465 ORTHO05D005450 3.6e-50 202.2 180 59.4
Migut.D00252 Erythranthe guttata HOM05D004465 ORTHO05D005450 7.2e-43 177.9 174 52.9
TAR633G0251 Trochodendron aralioides HOM05D004465 ORTHO05D005450 7.2e-43 177.9 181 51.4
QL02p002453 Quercus lobata HOM05D004465 ORTHO05D005450 1.2e-42 177.2 177 50.3
MELO3C026181.2 Cucumis melo HOM05D004465 ORTHO05D005450 1.6e-42 176.8 179 52.0
Aqoxy2G03197 Aquilegia oxysepala HOM05D004465 ORTHO05D005450 2.1e-42 176.4 181 51.4
CANSAT25G0403 Cannabis sativa HOM05D004465 ORTHO05D005450 4.7e-42 175.3 177 51.4
Cc04_g13300 Coffea canephora HOM05D004465 ORTHO05D005450 6.1e-42 174.9 180 51.1
TWI14G0547 Tripterygium wilfordii HOM05D004465 ORTHO05D005450 6.1e-42 174.9 176 52.8
VMungo1383G2558 Vigna mungo HOM05D004465 ORTHO05D005450 6.1e-42 174.9 178 50.6
Cfa006082 Carpinus fangiana HOM05D004465 ORTHO05D005450 8.0e-42 174.5 180 52.8
Lj1g0001578 Lotus japonicus HOM05D004465 ORTHO05D005450 1.0e-41 174.1 182 50.5
CSS0023645 Camellia sinensis var. sinensis HOM05D004465 ORTHO05D005450 1.4e-41 173.7 181 50.8
CSS0050172 Camellia sinensis var. sinensis HOM05D004465 ORTHO05D005450 1.4e-41 173.7 181 50.8
ClCG04G004880 Citrullus lanatus HOM05D004465 ORTHO05D005450 3.0e-41 172.6 179 50.8
Lalb_Chr21g0313041 Lupinus albus HOM05D004465 ORTHO05D005450 3.0e-41 172.6 182 50.0
SGA_v2.0_scaffold1G00438 Striga asiatica HOM05D004465 ORTHO05D005450 3.0e-41 172.6 177 52.0
Phvul.001G147600 Phaseolus vulgaris HOM05D004465 ORTHO05D005450 4.0e-41 172.2 178 48.9
Sed0001639 Sechium edule HOM05D004465 ORTHO05D005450 4.0e-41 172.2 178 52.8
arahy.Tifrunner.gnm1.ann1.N9UI87 Arachis hypogaea HOM05D004465 ORTHO05D005450 8.8e-41 171.0 178 51.1
arahy.Tifrunner.gnm1.ann1.CV9AIL Arachis hypogaea HOM05D004465 ORTHO05D005450 1.2e-40 170.6 178 51.1
CsaV3_4G031760 Cucumis sativus L. HOM05D004465 ORTHO05D005450 1.2e-40 170.6 179 49.2
Eucgr.H01542 Eucalyptus grandis HOM05D004465 ORTHO05D005450 1.5e-40 170.2 181 50.3
vmacro02540 Vaccinium macrocarpon HOM05D004465 ORTHO05D005450 1.5e-40 170.2 183 50.8
Lalb_Chr12g0205491 Lupinus albus HOM05D004465 ORTHO05D005450 2.0e-40 169.9 182 50.5
Manes.17G011600 Manihot esculenta HOM05D004465 ORTHO05D005450 2.6e-40 169.5 174 50.0
Actinidia24311 Actinidia chinensis HOM05D004465 ORTHO05D005450 3.4e-40 169.1 180 50.6
MSTRG.21585 Avicennia marina HOM05D004465 ORTHO05D005450 3.4e-40 169.1 179 50.3
MELO3C008880.2 Cucumis melo HOM05D004465 ORTHO05D005450 3.4e-40 169.1 174 51.7
Potri.003G194400 Populus trichocarpa HOM05D004465 ORTHO05D005450 3.4e-40 169.1 179 52.0
Psat4g023240 Pisum sativum HOM05D004465 ORTHO05D005450 4.4e-40 168.7 178 49.4
Prupe.8G247600 Prunus persica HOM05D004465 ORTHO05D005450 4.4e-40 168.7 179 49.2
CiPaw.08G102200 Carya illinoinensis HOM05D004465 ORTHO05D005450 5.7e-40 168.3 179 50.8
Nn1g08362 Nelumbo nucifera HOM05D004465 ORTHO05D005450 5.7e-40 168.3 181 49.2
Glyma.19G152700 Glycine max HOM05D004465 ORTHO05D005450 7.5e-40 167.9 182 48.9
Hma1.2p1_0628F.1_g191790 Hydrangea macrophylla HOM05D004465 ORTHO05D005450 1.3e-39 167.2 180 51.1
MD11G1292000 Malus domestica HOM05D004465 ORTHO05D005450 1.3e-39 167.2 177 48.6
GSVIVG01011064001 Vitis vinifera HOM05D004465 ORTHO05D005450 1.3e-39 167.2 179 49.7
Sabra03G0145100 Salix brachista HOM05D004465 ORTHO05D005450 2.8e-39 166.0 179 50.8
Ca_09695_v3 Cicer arietinum L. HOM05D004465 ORTHO05D005450 3.7e-39 165.6 180 47.8
SalBow3G2805 Salvia bowleyana HOM05D004465 ORTHO05D005450 3.7e-39 165.6 180 49.4
Medtr4g121550 Medicago truncatula HOM05D004465 ORTHO05D005450 4.9e-39 165.2 182 49.5
THA.LOC104815950 Tarenaya hassleriana HOM05D004465 ORTHO05D005450 8.3e-39 164.5 173 49.7
Rhsim13G0021500 Rhododendron simsii HOM05D004465 ORTHO05D005450 1.1e-38 164.1 181 48.6
COL.COLO4_22372 Corchorus olitorius HOM05D004465 ORTHO05D005450 1.4e-38 163.7 174 49.4
Gohir.A10G082900 Gossypium hirsutum HOM05D004465 ORTHO05D005450 1.4e-38 163.7 174 47.1
MBI19_g15845_MAGBIO Magnolia biondii HOM05D004465 ORTHO05D005450 1.4e-38 163.7 178 47.2
PSO302G0160 Papaver somniferum HOM05D004465 ORTHO05D005450 1.4e-38 163.7 179 46.9
Prupe.8G248900 Prunus persica HOM05D004465 ORTHO05D005450 1.4e-38 163.7 179 48.0
Thhalv10008200m.g Eutrema salsugineum HOM05D004465 ORTHO05D005450 1.8e-38 163.3 176 47.7
Psat3g002760 Pisum sativum HOM05D004465 ORTHO05D005450 1.8e-38 163.3 176 48.3
RcHm_v2.0_Chr6g0291951 Rosa chinensis HOM05D004465 ORTHO05D005450 2.4e-38 162.9 181 48.6
PSO170G6090 Papaver somniferum HOM05D004465 ORTHO05D005450 3.1e-38 162.5 179 46.4
AUR62006496 Chenopodium quinoa HOM05D004465 ORTHO05D005450 4.1e-38 162.2 181 49.2
Duzib147G0102 Durio zibethinus HOM05D004465 ORTHO05D005450 4.1e-38 162.2 173 48.6
Lju41A26G23 Lonicera japonica HOM05D004465 ORTHO05D005450 4.1e-38 162.2 181 48.1
Gohir.D10G105100 Gossypium hirsutum HOM05D004465 ORTHO05D005450 7.0e-38 161.4 174 47.1
AT1G03360 Arabidopsis thaliana HOM05D004465 ORTHO05D005450 9.1e-38 161.0 174 47.1
Os04g0520000 Oryza sativa ssp. japonica HOM05D004465 ORTHO05D005450 9.1e-38 161.0 176 48.9
CARHR002730 Cardamine hirsuta HOM05D004465 ORTHO05D005450 1.2e-37 160.6 176 46.6
FAN20G2589 Fragaria x ananassa HOM05D004465 ORTHO05D005450 1.2e-37 160.6 181 48.1
FAN24G2543 Fragaria x ananassa HOM05D004465 ORTHO05D005450 1.2e-37 160.6 181 49.2
Gorai.011G114800 Gossypium raimondii HOM05D004465 ORTHO05D005450 1.2e-37 160.6 174 47.1
Lsat_1_v5_gn_2_2880 Lactuca sativa HOM05D004465 ORTHO05D005450 1.2e-37 160.6 169 49.1
Cpa.g.sc9.125 Carica papaya HOM05D004465 ORTHO05D005450 1.6e-37 160.2 183 48.1
unitig_0.g1195 Utricularia gibba HOM05D004465 ORTHO05D005450 1.6e-37 160.2 178 47.2
Atru.chr5.1333 Acer truncatum HOM05D004465 ORTHO05D005450 2.0e-37 159.8 181 47.0
BolC5t28966H Brassica oleracea HOM05D004465 ORTHO05D005450 2.0e-37 159.8 175 49.1
FvH4_2g24140 Fragaria vesca HOM05D004465 ORTHO05D005450 2.7e-37 159.5 181 49.2
BraA10t42464Z Brassica rapa HOM05D004465 ORTHO05D005450 3.5e-37 159.1 175 48.0
Haze_04767 Corylus avellana HOM05D004465 ORTHO05D005450 4.5e-37 158.7 207 44.4
HanXRQChr15g0466601 Helianthus annuus HOM05D004465 ORTHO05D005450 4.5e-37 158.7 182 46.7
A10p01910 Brassica napus HOM05D004465 ORTHO05D005450 5.9e-37 158.3 175 48.6
FAN27G1503 Fragaria x ananassa HOM05D004465 ORTHO05D005450 5.9e-37 158.3 181 47.5
PGR119G1155 Punica granatum HOM05D004465 ORTHO05D005450 5.9e-37 158.3 179 46.4
Carub.0001s0248 Capsella rubella HOM05D004465 ORTHO05D005450 1.0e-36 157.5 176 46.6
CDE07G1085 Ceratophyllum demersum HOM05D004465 ORTHO05D005450 1.0e-36 157.5 181 44.8
Gohir.A11G223700 Gossypium hirsutum HOM05D004465 ORTHO05D005450 1.0e-36 157.5 174 47.1
Ciclev10021133m.g Citrus clementina HOM05D004465 ORTHO05D005450 1.3e-36 157.1 182 47.8
FAN15G3052 Fragaria x ananassa HOM05D004465 ORTHO05D005450 1.7e-36 156.8 181 46.4
Lsat_1_v5_gn_9_1881 Lactuca sativa HOM05D004465 ORTHO05D005450 1.7e-36 156.8 171 48.5
Thecc.01G117300 Theobroma cacao HOM05D004465 ORTHO05D005450 1.7e-36 156.8 174 46.6
C05p01850 Brassica napus HOM05D004465 ORTHO05D005450 2.9e-36 156.0 175 48.6
CDE05G1996 Ceratophyllum demersum HOM05D004465 ORTHO05D005450 2.9e-36 156.0 182 45.1
Dinv32970 Davidia involucrata HOM05D004465 ORTHO05D005450 3.8e-36 155.6 146 56.8
BcaC05g24540 Brassica carinata HOM05D004465 ORTHO05D005450 5.0e-36 155.2 175 48.6
Hund26620 Selenicereus undatus HOM05D004465 ORTHO05D005450 5.0e-36 155.2 180 48.3
Aa31LG1G9210 Aethionema arabicum HOM05D004465 ORTHO05D005450 6.6e-36 154.8 176 44.9
Gohir.D11G226800 Gossypium hirsutum HOM05D004465 ORTHO05D005450 6.6e-36 154.8 174 46.6
Gorai.002G150000 Gossypium raimondii HOM05D004465 ORTHO05D005450 6.6e-36 154.8 174 46.6
Aa31LG3G11130 Aethionema arabicum HOM05D004465 ORTHO05D005450 8.6e-36 154.5 176 45.5
AL1G12880 Arabidopsis lyrata HOM05D004465 ORTHO05D005450 8.6e-36 154.5 174 46.0
AUR62025039 Chenopodium quinoa HOM05D004465 ORTHO05D005450 8.6e-36 154.5 169 49.1
Oeu006227.1 Olea europaea HOM05D004465 ORTHO05D005450 8.6e-36 154.5 164 50.0
EL10Ac9g22404 Beta vulgaris HOM05D004465 ORTHO05D005450 1.9e-35 153.3 172 50.0
Zm00001eb067490 Zea mays HOM05D004465 ORTHO05D005450 1.9e-35 153.3 176 46.6
Sp1g02360 Schrenkiella parvula HOM05D004465 ORTHO05D005450 3.3e-35 152.5 174 46.6
Duzib264G0721 Durio zibethinus HOM05D004465 ORTHO05D005450 1.6e-34 150.2 170 48.2
Medtr2g093790 Medicago truncatula HOM05D004465 ORTHO05D005450 1.6e-34 150.2 172 45.3
TPR.G11548 Trifolium pratense HOM05D004465 ORTHO05D005450 1.6e-34 150.2 182 46.2
HPP92_017959 Vanilla planifolia HOM05D004465 ORTHO05D005450 1.0e-33 147.5 173 43.9
SHI31135 Sapria himalayana HOM05D000023 ORTHO05D000014 1.8e-33 146.7 172 45.3
Sc14g0002440 Simmondsia chinensis HOM05D004465 ORTHO05D005450 5.7e-32 141.7 179 45.8
Cc00_g20190 Coffea canephora HOM05D004465 ORTHO05D005450 7.5e-32 141.4 137 53.3
Psat4g225440 Pisum sativum HOM05D004465 ORTHO05D005450 7.5e-32 141.4 177 42.4
ATR0626G226 Amborella trichopoda HOM05D004465 ORTHO05D005450 8.3e-31 137.9 176 40.9
Ah.01g002340 Amaranthus hybridus HOM05D004465 ORTHO05D005450 1.1e-30 137.5 177 45.8
Actinidia00724 Actinidia chinensis HOM05D004465 ORTHO05D005450 1.4e-30 137.1 150 47.3
DCAR_018396 Daucus carota HOM05D004465 ORTHO05D005450 9.2e-30 134.4 149 48.3
SEGI_29460 Sequoiadendron giganteum HOM05D004465 ORTHO05D005450 1.3e-28 130.6 179 40.2
Oeu047890.1 Olea europaea HOM05D004465 ORTHO05D005450 2.3e-28 129.8 180 40.6
Carub.0002s0706 Capsella rubella HOM05D004465 ORTHO05D005450 1.6e-26 123.6 168 40.5
Pp3c3_30640 Physcomitrium patens HOM05D004465 ORTHO05D005450 8.0e-26 121.3 165 40.6
BcaC05g24533 Brassica carinata HOM05D001540 ORTHO05D001520 3.1e-25 119.4 172 39.5
ECA247G0279 Erigeron canadensis HOM05D004465 ORTHO05D005450 3.1e-25 119.4 125 52.0
Zm00001eb148160 Zea mays HOM05D004465 ORTHO05D005450 5.2e-25 118.6 136 44.1
AL1G67150 Arabidopsis lyrata HOM05D004465 ORTHO05D005450 8.9e-25 117.9 168 40.5
Lj1A45T35 Lonicera japonica HOM05D004465 ORTHO05D005450 8.9e-25 117.9 134 44.8
QL11p055012 Quercus lobata HOM05D004465 ORTHO05D005450 8.9e-25 117.9 122 51.6
CARHR054010 Cardamine hirsuta HOM05D004465 ORTHO05D005450 1.2e-24 117.5 140 44.3
BcaC05g24537 Brassica carinata HOM05D004465 ORTHO05D005450 2.6e-24 116.3 170 40.6
CARHR054740 Cardamine hirsuta HOM05D004465 ORTHO05D005450 4.9e-23 112.1 154 37.7
Glyma.03G149702 Glycine max HOM05D004465 ORTHO05D005450 8.3e-23 111.3 115 50.4
Mapoly0036s0012 Marchantia polymorpha HOM05D004465 ORTHO05D005450 1.1e-22 110.9 166 36.1
CBR_g31328 Chara braunii HOM05D004465 ORTHO05D000048 2.3e-17 93.2 180 31.7
SMO351G0040 Selaginella moellendorffii HOM05D004465 ORTHO05D005450 7.1e-14 81.6 154 29.9
ClCG06G018160 Citrullus lanatus HOM05D004465 ORTHO05D005450 4.7e-10 68.9 126 34.1
BcaC07g36969 Brassica carinata HOM05D004465 ORTHO05D005450 8.1e-10 68.2 79 44.3
C08p00550 Brassica napus HOM05D004465 ORTHO05D005450 8.1e-10 68.2 79 44.3
Cre12.g496450 Chlamydomonas reinhardtii HOM05D004465 ORTHO05D005450 1.4e-09 67.4 70 44.3
MCO01G628 Micromonas commoda HOM05D004465 ORTHO05D005450 3.1e-09 66.2 156 28.2
BolC8t46855H Brassica oleracea HOM05D004465 ORTHO05D005450 5.2e-09 65.5 76 43.4
CARHR120580 Cardamine hirsuta HOM05D004465 ORTHO05D005450 5.2e-09 65.5 56 51.8
QL09p052305 Quercus lobata HOM05D004465 ORTHO05D005450 6.8e-09 65.1 143 29.4
Haze_26173 Corylus avellana HOM05D004465 ORTHO05D005450 6.4e-07 58.5 162 30.9


User provided reference genes

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