Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 1.9e-126 456.1 269 100.0
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 2.7e-120 435.6 269 93.7
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 4.7e-109 398.3 263 85.2
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 6.2e-109 397.9 263 85.9
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 1.4e-108 396.7 263 85.2
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 1.4e-97 360.1 263 84.0
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 1.8e-95 353.2 248 83.9
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 2.7e-80 302.8 264 69.3
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 4.8e-77 292.0 263 65.4
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 4.1e-76 288.9 264 64.8
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 4.5e-75 285.4 264 61.7
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 2.2e-74 283.1 264 67.4
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 6.1e-72 275.0 266 61.3
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 1.3e-71 273.9 263 63.5
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 4.3e-70 268.9 267 58.8
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 1.6e-69 266.9 263 63.5
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 2.8e-69 266.2 264 64.4
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 3.1e-68 262.7 261 63.2
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 6.9e-68 261.5 262 63.4
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 6.9e-68 261.5 262 64.1
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 1.2e-67 260.8 262 63.0
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 2.0e-67 260.0 298 54.4
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 2.6e-67 259.6 263 62.7
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 4.5e-67 258.8 262 62.6
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 4.5e-67 258.8 264 64.8
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 1.7e-66 256.9 264 61.7
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 2.9e-66 256.1 262 59.9
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 5.0e-66 255.4 264 61.7
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 6.5e-66 255.0 262 59.9
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 6.5e-66 255.0 262 59.5
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 6.5e-66 255.0 262 59.9
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 1.1e-65 254.2 261 60.5
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 1.9e-65 253.4 295 54.2
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 1.0e-63 247.7 262 58.0
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 3.0e-63 246.1 261 58.2
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 3.0e-63 246.1 260 58.5
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 1.5e-62 243.8 266 60.2
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 3.3e-62 242.7 262 60.7
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 4.4e-62 242.3 261 60.9
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 7.4e-62 241.5 261 55.2
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 8.2e-61 238.0 263 62.0
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 1.4e-60 237.3 265 61.5
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 1.8e-60 236.9 264 60.6
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 4.1e-60 235.7 261 63.2
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 9.1e-60 234.6 262 60.3
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 1.2e-59 234.2 265 61.1
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 5.9e-59 231.9 260 57.7
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 1.3e-58 230.7 262 61.8
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 2.2e-58 229.9 265 58.5
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 3.8e-58 229.2 262 56.9
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 3.8e-58 229.2 262 61.5
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 8.5e-58 228.0 262 60.7
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 1.1e-57 227.6 260 56.5
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 1.1e-57 227.6 260 56.5
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 1.4e-57 227.3 261 52.5
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 1.9e-57 226.9 266 59.4
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 2.5e-57 226.5 266 59.4
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 7.2e-57 224.9 274 57.3
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 2.1e-56 223.4 303 50.5
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 4.7e-56 222.2 262 55.7
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 1.4e-55 220.7 262 56.9
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 1.5e-54 217.2 260 54.6
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 2.0e-54 216.9 260 55.8
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 3.3e-54 216.1 262 55.7
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 4.4e-54 215.7 261 55.9
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 9.7e-54 214.5 260 59.6
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 4.8e-53 212.2 264 54.9
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 5.3e-52 208.8 260 56.2
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 5.3e-52 208.8 262 53.8
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 1.2e-51 207.6 261 59.0
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 1.6e-51 207.2 260 55.4
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 7.7e-51 204.9 257 52.1
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 7.7e-51 204.9 264 53.8
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 1.0e-50 204.5 262 55.7
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 1.3e-50 204.1 262 52.3
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 2.2e-50 203.4 261 49.8
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 5.0e-50 202.2 264 52.3
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.1e-49 201.1 263 55.9
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 1.5e-49 200.7 263 53.2
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 5.5e-49 198.7 261 57.1
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 3.6e-48 196.1 264 52.7
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 2.3e-47 193.4 260 50.8
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 2.3e-47 193.4 263 55.9
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 2.0e-46 190.3 261 50.2
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 7.5e-46 188.3 263 49.4
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 9.7e-46 188.0 261 53.3
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 1.3e-45 187.6 267 53.9
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.7e-45 187.2 303 49.5
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 2.2e-42 176.8 263 47.5
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 2.5e-41 173.3 263 51.7
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 1.4e-39 167.5 215 55.8
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 1.8e-39 167.2 261 43.3
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 7.0e-36 155.2 302 43.4
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 2.0e-35 153.7 263 47.1
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 1.9e-33 147.1 254 42.5
TAR628G0388 Trochodendron aralioides HOM05D006779 ORTHO05D008491 2.5e-33 146.7 116 64.7
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 1.0e-31 141.4 288 42.0
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 2.8e-29 133.3 284 40.1
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 4.1e-28 129.4 154 58.4
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 5.4e-28 129.0 217 47.9
Cpa.g.sc62.36 Carica papaya HOM05D006779 ORTHO05D008491 9.2e-28 128.3 101 61.4
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 4.5e-27 125.9 215 49.3
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 2.3e-26 123.6 292 40.1
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 9.5e-25 118.2 194 45.4
CBR_g17671 Chara braunii HOM05D006779 ORTHO05D008491 6.1e-24 115.5 336 36.3
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 8.0e-24 115.2 194 44.3
TPR.G23511 Trifolium pratense HOM05D006779 ORTHO05D008491 1.2e-22 111.3 70 74.3
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 2.0e-22 110.5 151 60.3
Os06g0215200 Oryza sativa ssp. japonica HOM05D006779 ORTHO05D008491 2.4e-20 103.6 70 65.7
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 2.3e-18 97.1 149 55.0
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.9e-17 94.0 215 46.5
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 5.8e-14 82.4 187 39.0
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 3.2e-12 76.6 261 31.8
CSS0034996 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.6e-11 74.3 194 37.1
EL10Ac9g20940 Beta vulgaris HOM05D002686 ORTHO05D003222 7.3e-09 65.5 56 67.9
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.2e-08 64.7 152 38.2
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.2e-08 64.7 152 38.2
TAR628G1516 Trochodendron aralioides HOM05D006779 ORTHO05D008491 1.2e-06 58.2 120 42.5


User provided reference genes

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