Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004827g0030 Nicotiana tabacum HOM05D007201 ORTHO05D009122 7.9e-157 557.4 347 100.0
Nitab4.5_0000073g0490 Nicotiana tabacum HOM05D007201 ORTHO05D009122 1.5e-128 463.4 366 82.2
PGSC0003DMG400002893 Solanum tuberosum HOM05D007201 ORTHO05D009122 7.0e-113 411.4 355 73.8
Solyc12g009390.2 Solanum lycopersicum HOM05D007201 ORTHO05D009122 3.8e-111 405.6 359 75.5
Sopen12g004380 Solanum pennellii HOM05D007201 ORTHO05D009122 1.5e-110 403.7 358 76.5
Peaxi162Scf00047g02450 Petunia axillaris HOM05D007201 ORTHO05D009122 1.1e-105 387.5 325 65.8
CAN.G1591.3 Capsicum annuum HOM05D007201 ORTHO05D009122 1.3e-63 247.7 192 79.2
CSS0027843 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 8.7e-63 245.0 347 47.0
Manes.02G222200 Manihot esculenta HOM05D007201 ORTHO05D009122 4.9e-58 229.2 349 49.3
Haze_21242 Corylus avellana HOM05D007201 ORTHO05D009122 3.5e-56 223.0 348 41.4
Cc06_g23490 Coffea canephora HOM05D007201 ORTHO05D009122 6.0e-56 222.2 378 39.9
Actinidia03796 Actinidia chinensis HOM05D007201 ORTHO05D009122 1.3e-55 221.1 357 42.6
CSS0037159 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 1.3e-55 221.1 345 44.9
Rhsim03G0269700 Rhododendron simsii HOM05D007201 ORTHO05D009122 1.3e-55 221.1 348 42.0
Ciclev10008517m.g Citrus clementina HOM05D007201 ORTHO05D009122 2.3e-55 220.3 352 40.6
TAR626G0209 Trochodendron aralioides HOM05D007201 ORTHO05D009122 6.6e-55 218.8 354 40.7
MELO3C010035.2 Cucumis melo HOM05D007201 ORTHO05D009122 8.7e-55 218.4 341 43.1
Thecc.09G202300 Theobroma cacao HOM05D007201 ORTHO05D009122 4.3e-54 216.1 347 40.9
Cfa012872 Carpinus fangiana HOM05D007201 ORTHO05D009122 9.6e-54 214.9 348 40.5
Prupe.1G000600 Prunus persica HOM05D007201 ORTHO05D009122 9.6e-54 214.9 349 40.4
Lju50A20G7 Lonicera japonica HOM05D007201 ORTHO05D009122 1.6e-53 214.2 357 47.3
Gorai.012G009900 Gossypium raimondii HOM05D007201 ORTHO05D009122 2.1e-53 213.8 349 45.0
CsaV3_1G044360 Cucumis sativus L. HOM05D007201 ORTHO05D009122 2.8e-53 213.4 341 43.4
Gohir.D04G008200 Gossypium hirsutum HOM05D007201 ORTHO05D009122 2.8e-53 213.4 350 41.7
FvH4_4g00131 Fragaria vesca HOM05D007201 ORTHO05D009122 4.8e-53 212.6 348 41.1
CiPaw.15G000100 Carya illinoinensis HOM05D007201 ORTHO05D009122 1.4e-52 211.1 344 39.5
MD04G1000600 Malus domestica HOM05D007201 ORTHO05D009122 1.4e-52 211.1 348 39.9
Atru.chr7.298 Acer truncatum HOM05D007201 ORTHO05D009122 2.4e-52 210.3 345 41.4
Nn8g41282 Nelumbo nucifera HOM05D007201 ORTHO05D009122 4.0e-52 209.5 340 42.1
COL.COLO4_09000 Corchorus olitorius HOM05D007201 ORTHO05D009122 9.9e-51 204.9 366 39.6
RcHm_v2.0_Chr4g0384751 Rosa chinensis HOM05D007201 ORTHO05D009122 1.3e-50 204.5 344 39.2
Potri.006G081100 Populus trichocarpa HOM05D007201 ORTHO05D009122 1.7e-50 204.1 381 42.8
FAN12G0236 Fragaria x ananassa HOM05D007201 ORTHO05D009122 1.9e-49 200.7 344 39.5
QL11p005700 Quercus lobata HOM05D007201 ORTHO05D009122 1.9e-49 200.7 351 38.7
Sabra06G0061200 Salix brachista HOM05D007201 ORTHO05D009122 1.9e-49 200.7 401 36.9
CSS0027553 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 7.1e-49 198.7 316 45.6
GSVIVG01034266001 Vitis vinifera HOM05D007201 ORTHO05D009122 4.6e-48 196.1 346 47.7
arahy.Tifrunner.gnm1.ann1.X4HTYC Arachis hypogaea HOM05D007201 ORTHO05D009122 1.0e-47 194.9 346 46.8
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 2.3e-47 193.7 338 39.3
Lj3g0009807 Lotus japonicus HOM05D007201 ORTHO05D009122 2.3e-47 193.7 345 38.6
PSO339G5324 Papaver somniferum HOM05D007201 ORTHO05D009122 3.9e-47 193.0 349 40.1
Lsat_1_v5_gn_5_80700 Lactuca sativa HOM05D007201 ORTHO05D009122 1.1e-46 191.4 341 37.0
arahy.Tifrunner.gnm1.ann1.G7GJBK Arachis hypogaea HOM05D007201 ORTHO05D009122 2.5e-46 190.3 342 46.2
Phvul.011G018600 Phaseolus vulgaris HOM05D007201 ORTHO05D009122 7.4e-46 188.7 341 38.4
ECA234G1264 Erigeron canadensis HOM05D007201 ORTHO05D009122 1.3e-45 188.0 344 39.8
SGA_v2.0_scaffold21G09583 Striga asiatica HOM05D007201 ORTHO05D009122 8.1e-45 185.3 393 36.4
VMungo1127G0228 Vigna mungo HOM05D007201 ORTHO05D009122 5.3e-44 182.6 339 37.5
TPR.G28027 Trifolium pratense HOM05D007201 ORTHO05D009122 1.2e-43 181.4 357 47.1
DCAR_019970 Daucus carota HOM05D002293 ORTHO05D005475 4.5e-43 179.5 336 37.8
Sc10g0006090 Simmondsia chinensis HOM05D007201 ORTHO05D009122 5.8e-43 179.1 340 36.8
Aqoxy7G02518 Aquilegia oxysepala HOM05D007201 ORTHO05D009122 1.3e-42 177.9 350 35.4
Medtr4g078160 Medicago truncatula HOM05D007201 ORTHO05D009122 1.7e-42 177.6 339 44.0
Glyma.11G109000 Glycine max HOM05D007201 ORTHO05D009122 2.9e-42 176.8 350 34.9
PGR142G4385 Punica granatum HOM05D007201 ORTHO05D009122 6.5e-42 175.6 335 39.1
HanXRQChr10g0309261 Helianthus annuus HOM05D007201 ORTHO05D009122 8.4e-42 175.3 208 47.6
HPP92_017373 Vanilla planifolia HOM05D007201 ORTHO05D009122 3.2e-41 173.3 350 37.1
Hund22525 Selenicereus undatus HOM05D007201 ORTHO05D009122 9.3e-41 171.8 360 37.5
Lalb_Chr19g0140031 Lupinus albus HOM05D007201 ORTHO05D009122 1.6e-40 171.0 336 35.1
vmacro22702 Vaccinium macrocarpon HOM05D007201 ORTHO05D009122 2.7e-40 170.2 450 32.0
Glyma.12G016400 Glycine max HOM05D007201 ORTHO05D009122 1.0e-39 168.3 349 34.4
Eucgr.C00055 Eucalyptus grandis HOM05D007201 ORTHO05D009122 1.8e-39 167.5 347 35.7
SHI24431 Sapria himalayana HOM05D007201 ORTHO05D009122 1.8e-39 167.5 218 45.0
CANSAT25G2467 Cannabis sativa HOM05D007201 ORTHO05D009122 3.9e-39 166.4 136 58.1
EL10Ac2g03602 Beta vulgaris HOM05D007201 ORTHO05D009122 6.7e-39 165.6 390 37.4
FAN12G1512 Fragaria x ananassa HOM05D007201 ORTHO05D009122 6.7e-39 165.6 124 62.1
CDE04G0352 Ceratophyllum demersum HOM05D007201 ORTHO05D009122 1.9e-38 164.1 338 36.4
Carub.0002s2218 Capsella rubella HOM05D007201 ORTHO05D009122 8.2e-37 158.7 348 36.8
Cpa.g.sc46.114 Carica papaya HOM05D007201 ORTHO05D009122 1.5e-35 154.5 344 34.3
Psat7g169960 Pisum sativum HOM05D007201 ORTHO05D009122 4.5e-35 152.9 351 34.8
Thhalv10018711m.g Eutrema salsugineum HOM05D007201 ORTHO05D009122 2.9e-34 150.2 348 37.4
Zm00001eb227240 Zea mays HOM05D007201 ORTHO05D009122 1.4e-33 147.9 348 33.6
Aqoxy37s001 Aquilegia oxysepala HOM05D007201 ORTHO05D009122 1.2e-32 144.8 132 55.3
Dinv26498 Davidia involucrata HOM05D007201 ORTHO05D009122 1.2e-32 144.8 351 35.6
Os06g0704300 Oryza sativa ssp. japonica HOM05D007201 ORTHO05D009122 1.6e-32 144.4 343 32.7
Aa31LG4G5550 Aethionema arabicum HOM05D007201 ORTHO05D009122 2.1e-32 144.1 138 55.8
THA.LOC104809224 Tarenaya hassleriana HOM05D007201 ORTHO05D009122 4.6e-32 142.9 340 38.2
BraA07t31630Z Brassica rapa HOM05D007201 ORTHO05D009122 7.9e-32 142.1 349 39.8
Sp5g30480 Schrenkiella parvula HOM05D007201 ORTHO05D009122 2.3e-31 140.6 382 39.3
AT1G75340 Arabidopsis thaliana HOM05D007201 ORTHO05D009122 1.5e-30 137.9 135 53.3
AL2G35270 Arabidopsis lyrata HOM05D007201 ORTHO05D009122 1.9e-30 137.5 403 34.7
FAN22G0406 Fragaria x ananassa HOM05D007201 ORTHO05D009122 5.7e-30 136.0 344 34.3
A07p40900 Brassica napus HOM05D007201 ORTHO05D009122 7.4e-30 135.6 344 36.9
C06p49330 Brassica napus HOM05D007201 ORTHO05D009122 7.4e-30 135.6 352 43.8
CARHR068690 Cardamine hirsuta HOM05D007201 ORTHO05D009122 1.3e-29 134.8 138 51.4
ATR0626G320 Amborella trichopoda HOM05D007201 ORTHO05D009122 2.2e-29 134.0 326 33.1
Oeu000954.1 Olea europaea HOM05D007201 ORTHO05D009122 2.2e-29 134.0 279 35.8
BcaC08g47362 Brassica carinata HOM05D007201 ORTHO05D009122 8.2e-29 132.1 350 40.3
AUR62027959 Chenopodium quinoa HOM05D007201 ORTHO05D009122 5.3e-28 129.4 111 57.7
SEGI_05170 Sequoiadendron giganteum HOM05D007201 ORTHO05D009122 6.9e-28 129.0 344 30.5
BolC6t39968H Brassica oleracea HOM05D007201 ORTHO05D009122 1.2e-27 128.3 365 38.9
FAN17G0247 Fragaria x ananassa HOM05D007201 ORTHO05D009122 1.2e-27 128.3 93 60.2
unitig_8.g3542 Utricularia gibba HOM05D007201 ORTHO05D009122 3.4e-27 126.7 308 32.5
Duzib168G1263 Durio zibethinus HOM05D007201 ORTHO05D009122 2.9e-26 123.6 352 37.5
Migut.L01609 Erythranthe guttata HOM05D007201 ORTHO05D009122 1.5e-19 101.3 341 30.5
Mapoly0005s0044 Marchantia polymorpha HOM05D007201 ORTHO05D009122 2.6e-19 100.5 335 29.6
AagrBONN_evm.TU.Sc2ySwM_117.2509 Anthoceros agrestis HOM05D007201 ORTHO05D009122 1.0e-18 98.6 118 47.5
Pp3c7_12210 Physcomitrium patens HOM05D007201 ORTHO05D009122 5.5e-17 92.8 324 29.0
Gohir.A05G407400 Gossypium hirsutum HOM05D007201 ORTHO05D009122 4.7e-16 89.7 259 37.8
ClCG03G010480 Citrullus lanatus HOM05D007201 ORTHO05D009122 1.7e-13 81.3 255 33.7
CSS0006520 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 2.8e-13 80.5 62 58.1
CSS0048863 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 2.8e-13 80.5 62 58.1
CBR_g15955 Chara braunii HOM05D007201 ORTHO05D009122 8.2e-13 79.0 87 46.0
Cre06.g254700 Chlamydomonas reinhardtii HOM05D007201 ORTHO05D009122 6.7e-07 59.3 71 35.2


User provided reference genes

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