Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 3.3e-134 481.9 272 100.0
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 4.2e-121 438.3 269 93.7
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 1.7e-114 416.4 263 88.2
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 2.2e-114 416.0 263 89.0
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 5.0e-114 414.8 263 88.2
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 3.7e-101 372.1 248 87.1
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 1.1e-100 370.5 263 84.4
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 9.7e-86 320.9 264 72.0
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 7.7e-83 311.2 263 68.4
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 3.6e-80 302.4 263 65.4
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 6.8e-79 298.1 264 68.6
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 2.6e-78 296.2 263 62.7
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 4.8e-77 292.0 266 63.5
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 1.4e-76 290.4 263 65.4
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 3.5e-75 285.8 263 65.8
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 2.9e-74 282.7 267 60.3
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 8.5e-74 281.2 267 60.3
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 1.1e-73 280.8 298 56.7
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 5.5e-73 278.5 263 65.0
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 2.7e-72 276.2 264 65.5
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 2.3e-71 273.1 262 63.4
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 2.3e-71 273.1 261 64.8
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 5.2e-71 271.9 291 55.7
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 6.8e-71 271.6 262 62.6
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 1.5e-70 270.4 262 62.6
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.5e-70 270.4 262 62.2
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.5e-70 270.4 262 62.6
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 4.4e-70 268.9 262 63.4
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 4.4e-70 268.9 261 62.1
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 7.5e-70 268.1 262 62.6
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 1.3e-69 267.3 264 61.4
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 1.7e-69 266.9 264 64.8
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 2.8e-69 266.2 264 62.9
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 2.8e-69 266.2 261 60.9
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 2.4e-68 263.1 262 60.3
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 1.0e-66 257.7 261 59.0
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 5.0e-66 255.4 260 58.8
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 1.9e-65 253.4 261 61.3
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 7.3e-65 251.5 266 60.5
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 2.8e-64 249.6 262 60.3
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 2.3e-63 246.5 265 61.9
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 8.9e-63 244.6 265 60.4
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 3.4e-62 242.7 261 62.5
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 2.2e-61 240.0 262 58.4
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 2.9e-61 239.6 262 59.5
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 2.9e-61 239.6 263 60.8
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 4.9e-61 238.8 261 54.4
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 8.3e-61 238.0 260 57.7
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 1.4e-60 237.3 262 60.7
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 1.4e-60 237.3 266 59.0
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 1.4e-60 237.3 265 58.9
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 3.2e-60 236.1 266 59.0
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 4.1e-60 235.7 260 57.7
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 4.1e-60 235.7 260 57.7
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 4.1e-60 235.7 262 59.5
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 4.1e-60 235.7 262 60.3
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 3.5e-59 232.6 264 57.2
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 4.6e-59 232.3 303 50.5
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 7.8e-59 231.5 274 55.5
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 1.3e-58 230.7 262 56.9
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 1.5e-57 227.3 260 55.4
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 1.5e-57 227.3 262 55.7
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 4.3e-57 225.7 262 56.9
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 4.3e-57 225.7 260 56.5
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 1.6e-56 223.8 262 55.7
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 1.4e-55 220.7 261 54.4
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 2.3e-55 219.9 262 54.2
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 2.3e-55 219.9 262 51.5
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 4.0e-55 219.2 264 55.7
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 1.2e-54 217.6 264 53.8
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 2.0e-54 216.9 264 54.5
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 2.6e-54 216.5 261 58.6
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 1.7e-53 213.8 260 57.3
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 2.9e-53 213.0 262 55.7
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 3.7e-53 212.6 260 55.0
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 1.4e-52 210.7 262 54.6
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 1.4e-52 210.7 260 55.4
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 5.4e-52 208.8 260 52.7
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 9.2e-52 208.0 264 53.4
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.6e-51 207.2 263 55.1
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 4.6e-51 205.7 261 52.1
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 7.8e-51 204.9 257 51.0
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 1.7e-50 203.8 263 51.3
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 3.3e-49 199.5 261 54.4
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 9.5e-49 198.0 263 54.4
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 4.0e-47 192.6 303 48.8
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 2.0e-46 190.3 263 49.4
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 2.6e-46 189.9 261 52.1
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 4.4e-46 189.1 267 51.7
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 1.6e-43 180.6 215 56.7
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 2.3e-42 176.8 263 50.2
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 1.2e-40 171.0 261 43.7
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 6.4e-37 158.7 302 42.7
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 2.7e-35 153.3 263 46.0
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 7.8e-35 151.8 253 42.7
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 1.1e-33 147.9 288 41.3
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 3.3e-33 146.4 154 63.0
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 7.3e-33 145.2 217 50.2
TAR628G0388 Trochodendron aralioides HOM05D006779 ORTHO05D008491 1.2e-32 144.4 116 63.8
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 1.3e-29 134.4 284 39.8
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.7e-29 134.0 195 48.7
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.4e-28 131.0 195 47.7
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 4.2e-28 129.4 215 47.9
Cpa.g.sc62.36 Carica papaya HOM05D006779 ORTHO05D008491 2.1e-27 127.1 101 61.4
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 3.9e-26 122.9 298 39.3
CBR_g17671 Chara braunii HOM05D006779 ORTHO05D008491 1.1e-25 121.3 334 36.8
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 5.6e-25 119.0 151 60.3
TPR.G23511 Trifolium pratense HOM05D006779 ORTHO05D008491 3.4e-22 109.8 70 74.3
Os06g0215200 Oryza sativa ssp. japonica HOM05D006779 ORTHO05D008491 7.1e-20 102.1 70 65.7
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.2e-19 101.3 186 43.0
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.2e-19 101.3 215 46.5
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 7.9e-19 98.6 151 53.0
CSS0034996 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 2.8e-16 90.1 195 40.5
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 9.9e-14 81.6 153 42.5
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 9.9e-14 81.6 153 42.5
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 3.8e-13 79.7 261 31.8
EL10Ac9g20940 Beta vulgaris HOM05D002686 ORTHO05D003222 1.6e-08 64.3 56 67.9
TAR628G1516 Trochodendron aralioides HOM05D006779 ORTHO05D008491 8.1e-08 62.0 120 41.7


User provided reference genes

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