Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003714g0040 Nicotiana tabacum HOM05D007300 ORTHO05D009301 0.0e+00 1386.3 697 100.0
Nitab4.5_0001283g0060 Nicotiana tabacum HOM05D007300 ORTHO05D009301 0.0e+00 1271.1 686 94.2
Solyc02g071280.3 Solanum lycopersicum HOM05D007300 ORTHO05D009301 0.0e+00 1076.6 669 82.4
PGSC0003DMG400003073 Solanum tuberosum HOM05D007300 ORTHO05D009301 0.0e+00 1075.1 665 83.0
Sopen02g020340 Solanum pennellii HOM05D007300 ORTHO05D009301 9.5e-312 1073.2 667 82.3
CAN.G257.51 Capsicum annuum HOM05D007300 ORTHO05D009301 7.0e-306 1053.5 669 81.2
Peaxi162Scf00649g00027 Petunia axillaris HOM05D007300 ORTHO05D009301 5.2e-293 1010.7 600 85.7
Dinv32299 Davidia involucrata HOM05D007300 ORTHO05D009301 1.1e-218 763.8 658 60.3
CSS0020184 Camellia sinensis var. sinensis HOM05D007300 ORTHO05D009301 2.6e-215 752.7 663 59.6
Oeu021524.1 Olea europaea HOM05D007300 ORTHO05D009301 4.0e-208 728.8 596 63.4
Actinidia19486 Actinidia chinensis HOM05D007300 ORTHO05D009301 1.8e-205 719.9 665 58.0
Thecc.06G157700 Theobroma cacao HOM05D007300 ORTHO05D009301 1.8e-205 719.9 666 56.6
Cfa001024 Carpinus fangiana HOM05D007300 ORTHO05D009301 7.0e-205 718.0 663 58.8
CiPaw.10G096200 Carya illinoinensis HOM05D007300 ORTHO05D009301 9.2e-205 717.6 668 57.6
GSVIVG01021378001 Vitis vinifera HOM05D007300 ORTHO05D009301 4.3e-202 708.8 664 55.7
QL05p060322 Quercus lobata HOM05D007300 ORTHO05D009301 1.2e-199 700.7 671 56.0
TAR627G1006 Trochodendron aralioides HOM05D007300 ORTHO05D009301 2.9e-198 696.0 661 56.0
Potri.001G353800 Populus trichocarpa HOM05D007300 ORTHO05D009301 1.6e-196 690.3 604 58.8
Prupe.4G073700 Prunus persica HOM05D007300 ORTHO05D009301 4.6e-196 688.7 675 55.7
RcHm_v2.0_Chr5g0012901 Rosa chinensis HOM05D007300 ORTHO05D009301 5.0e-195 685.3 668 55.4
Migut.M00959 Erythranthe guttata HOM05D007300 ORTHO05D009301 1.1e-194 684.1 665 55.2
MD05G1291800 Malus domestica HOM05D007300 ORTHO05D009301 4.3e-194 682.2 699 53.9
FvH4_3g06410 Fragaria vesca HOM05D007300 ORTHO05D009301 7.3e-194 681.4 669 55.0
Gohir.D10G038600 Gossypium hirsutum HOM05D007300 ORTHO05D009301 7.3e-194 681.4 674 55.6
Gorai.011G040700 Gossypium raimondii HOM05D007300 ORTHO05D009301 1.6e-193 680.2 674 55.5
TWI73G0852 Tripterygium wilfordii HOM05D007300 ORTHO05D009301 1.4e-192 677.2 667 54.4
FAN21G2574 Fragaria x ananassa HOM05D007300 ORTHO05D009301 3.1e-192 676.0 669 54.7
Lsat_1_v5_gn_7_31040 Lactuca sativa HOM05D007300 ORTHO05D009301 1.2e-191 674.1 666 55.3
Haze_05485 Corylus avellana HOM05D007300 ORTHO05D009301 3.4e-191 672.5 769 51.6
Gohir.A10G037600 Gossypium hirsutum HOM05D007300 ORTHO05D009301 2.2e-190 669.8 673 55.3
ECA236G2360 Erigeron canadensis HOM05D007300 ORTHO05D009301 3.7e-190 669.1 635 56.1
Ciclev10014510m.g Citrus clementina HOM05D007300 ORTHO05D009301 6.4e-190 668.3 674 53.6
Sabra16G0232700 Salix brachista HOM05D007300 ORTHO05D009301 5.4e-189 665.2 622 56.1
HanXRQChr04g0119571 Helianthus annuus HOM05D007300 ORTHO05D009301 7.0e-189 664.8 661 53.9
Manes.17G064900 Manihot esculenta HOM05D007300 ORTHO05D009301 1.2e-188 664.1 672 55.1
Lj1C1181T32 Lonicera japonica HOM05D007300 ORTHO05D009301 1.0e-187 661.0 655 54.8
SalBow8G1735 Salvia bowleyana HOM05D007300 ORTHO05D009301 8.6e-187 657.9 626 56.4
FAN11G2841 Fragaria x ananassa HOM05D007300 ORTHO05D009301 2.1e-185 653.3 730 50.4
COL.COLO4_22798 Corchorus olitorius HOM05D007300 ORTHO05D009301 4.7e-185 652.1 672 53.9
SGA_v2.0_scaffold1G00132 Striga asiatica HOM05D007300 ORTHO05D009301 1.8e-184 650.2 673 53.0
Cpa.g.sc17.110 Carica papaya HOM05D007300 ORTHO05D009301 1.5e-183 647.1 607 56.0
Atru.chr10.1398 Acer truncatum HOM05D007300 ORTHO05D009301 1.2e-180 637.5 559 60.1
Atru.chr10.1407 Acer truncatum HOM05D007300 ORTHO05D009301 1.6e-180 637.1 558 60.0
ClCG03G007190 Citrullus lanatus HOM05D007300 ORTHO05D009301 3.5e-180 636.0 665 52.2
DCAR_027959 Daucus carota HOM05D007300 ORTHO05D009301 3.5e-180 636.0 598 56.9
Glyma.08G121900 Glycine max HOM05D007300 ORTHO05D009301 3.9e-179 632.5 649 53.6
CANSAT35G1474 Cannabis sativa HOM05D007300 ORTHO05D009301 4.3e-178 629.0 685 53.7
CsaV3_1G032780 Cucumis sativus L. HOM05D007300 ORTHO05D009301 1.2e-177 627.5 597 55.6
Glyma.05G164500 Glycine max HOM05D007300 ORTHO05D009301 1.2e-177 627.5 662 53.2
Aqoxy1G01857 Aquilegia oxysepala HOM05D007300 ORTHO05D009301 1.6e-177 627.1 610 53.9
Medtr8g088030 Medicago truncatula HOM05D007300 ORTHO05D009301 8.1e-177 624.8 619 54.0
arahy.Tifrunner.gnm1.ann1.D64P8M Arachis hypogaea HOM05D007300 ORTHO05D009301 3.1e-176 622.9 637 54.6
Lalb_Chr13g0295471 Lupinus albus HOM05D007300 ORTHO05D009301 4.0e-176 622.5 645 52.9
arahy.Tifrunner.gnm1.ann1.FQ35JE Arachis hypogaea HOM05D007300 ORTHO05D009301 5.8e-175 618.6 651 53.3
Eucgr.D00343 Eucalyptus grandis HOM05D007300 ORTHO05D009301 2.2e-174 616.7 581 54.7
THA.LOC104827733 Tarenaya hassleriana HOM05D007300 ORTHO05D009301 2.2e-174 616.7 675 51.1
Duzib235G1110 Durio zibethinus HOM05D007300 ORTHO05D009301 2.9e-174 616.3 668 50.7
Lj4g0024386 Lotus japonicus HOM05D007300 ORTHO05D009301 7.1e-173 611.7 603 53.9
Ca_17871_v3 Cicer arietinum L. HOM05D007300 ORTHO05D009301 2.1e-172 610.1 600 54.3
Thhalv10000812m.g Eutrema salsugineum HOM05D007300 ORTHO05D009301 1.9e-170 603.6 676 48.8
Sc05g0006590 Simmondsia chinensis HOM05D007300 ORTHO05D009301 1.9e-170 603.6 673 49.0
Nn3g20905 Nelumbo nucifera HOM05D007300 ORTHO05D009301 3.3e-170 602.8 602 54.0
Phvul.002G244500 Phaseolus vulgaris HOM05D007300 ORTHO05D009301 7.3e-170 601.7 598 52.8
TPR.G6793 Trifolium pratense HOM05D007300 ORTHO05D009301 2.1e-169 600.1 602 53.7
AT5G46420 Arabidopsis thaliana HOM05D007300 ORTHO05D009301 3.6e-169 599.4 680 49.3
CARHR175340 Cardamine hirsuta HOM05D007300 ORTHO05D009301 4.7e-169 599.0 672 50.0
Sp2g11270 Schrenkiella parvula HOM05D007300 ORTHO05D009301 1.5e-167 594.0 676 48.5
MBI10_g02388_MAGBIO Magnolia biondii HOM05D007300 ORTHO05D009301 2.0e-167 593.6 609 50.7
PSO541G4163 Papaver somniferum HOM05D007300 ORTHO05D009301 7.6e-167 591.7 606 51.0
Carub.0008s0147 Capsella rubella HOM05D007300 ORTHO05D009301 1.7e-166 590.5 670 48.4
A06p45940 Brassica napus HOM05D007300 ORTHO05D009301 6.4e-166 588.6 677 49.0
Aa31LG9G6430 Aethionema arabicum HOM05D007300 ORTHO05D009301 1.1e-165 587.8 674 49.4
VMungo0251G3397 Vigna mungo HOM05D007300 ORTHO05D009301 1.4e-165 587.4 644 51.2
BolC7t43517H Brassica oleracea HOM05D007300 ORTHO05D009301 1.6e-164 583.9 673 49.0
C07p29650 Brassica napus HOM05D007300 ORTHO05D009301 2.1e-164 583.6 673 48.9
AL8G11990 Arabidopsis lyrata HOM05D007300 ORTHO05D009301 4.6e-164 582.4 670 47.6
Psat7g066760 Pisum sativum HOM05D007300 ORTHO05D009301 1.1e-162 577.8 633 49.1
BraA06t27457Z Brassica rapa HOM05D007300 ORTHO05D009301 1.9e-162 577.0 661 49.6
AUR62027555 Chenopodium quinoa HOM05D007300 ORTHO05D009301 1.6e-161 573.9 616 49.2
PGR044G1273 Punica granatum HOM05D007300 ORTHO05D009301 4.5e-159 565.8 555 54.8
AUR62035801 Chenopodium quinoa HOM05D007300 ORTHO05D009301 3.2e-157 559.7 606 48.8
EL10Ac8g19794 Beta vulgaris HOM05D007300 ORTHO05D009301 5.7e-138 495.7 670 43.9
FAN16G1565 Fragaria x ananassa HOM05D007300 ORTHO05D009301 1.5e-135 487.6 480 55.2
ATR1153G036 Amborella trichopoda HOM05D007300 ORTHO05D009301 7.9e-132 475.3 643 44.0
HPP92_023296 Vanilla planifolia HOM05D007300 ORTHO05D009301 1.3e-131 474.6 675 41.3
unitig_92.g28150 Utricularia gibba HOM05D007300 ORTHO05D009301 1.0e-123 448.4 552 46.7
Sed0024786 Sechium edule HOM05D007300 ORTHO05D009301 2.0e-111 407.5 368 59.0
PSO675G3105 Papaver somniferum HOM05D007300 ORTHO05D009301 1.2e-103 381.7 365 55.3
SEGI_38698 Sequoiadendron giganteum HOM05D007300 ORTHO05D009301 4.0e-99 366.7 668 33.1
HPP92_023271 Vanilla planifolia HOM05D007300 ORTHO05D009301 6.8e-91 339.3 672 33.8
MELO3C002704.2 Cucumis melo HOM05D007300 ORTHO05D009301 7.3e-77 292.7 347 45.8
Mapoly0019s0078 Marchantia polymorpha HOM05D007300 ORTHO05D009301 8.0e-76 289.3 675 28.9
Zm00001eb296050 Zea mays HOM05D007300 ORTHO05D009301 3.2e-72 277.3 329 45.3
CDE06G2820 Ceratophyllum demersum HOM05D007300 ORTHO05D009301 9.2e-72 275.8 338 46.4
Pp3c15_14250 Physcomitrium patens HOM05D007300 ORTHO05D009301 5.0e-70 270.0 530 31.9
AagrBONN_evm.TU.Sc2ySwM_228.1844 Anthoceros agrestis HOM05D007300 ORTHO05D004905 5.6e-69 266.5 529 34.4
Os05g0566300 Oryza sativa ssp. japonica HOM05D007300 ORTHO05D009301 1.4e-56 225.3 281 44.1
Zm00001eb349440 Zea mays HOM05D007300 ORTHO05D009301 1.5e-42 178.7 176 50.0
Gorai.004G093400 Gossypium raimondii HOM05D007300 ORTHO05D009301 4.3e-37 160.6 131 61.1
Gohir.D08G088700 Gossypium hirsutum HOM05D007300 ORTHO05D009301 5.6e-37 160.2 169 52.1
SEGI_17563 Sequoiadendron giganteum HOM05D007300 ORTHO05D009301 6.9e-35 153.3 131 54.2
MCO05G669 Micromonas commoda HOM05D007300 ORTHO05D009301 1.6e-23 115.5 227 33.9
Zm00001eb184690 Zea mays HOM05D007300 ORTHO05D009301 2.4e-19 101.7 83 53.0
CDE06G1765 Ceratophyllum demersum HOM05D007300 ORTHO05D009301 5.3e-19 100.5 157 36.3
Cre03.g191950 Chlamydomonas reinhardtii HOM05D007300 ORTHO05D009301 1.0e-17 96.3 210 30.5
Cfa023099 Carpinus fangiana HOM05D003927 ORTHO05D004905 3.2e-08 64.7 324 20.7
THA.LOC104798460 Tarenaya hassleriana HOM05D007300 ORTHO05D009301 8.8e-06 56.6 134 34.3


User provided reference genes

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