Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002884g0020 Nicotiana tabacum HOM05D030166 ORTHO05D001109 1.4e-134 483.0 253 100.0
PGSC0003DMG400006298 Solanum tuberosum HOM05D001283 ORTHO05D001109 3.7e-23 112.8 269 39.8
CSS0007163 Camellia sinensis var. sinensis HOM05D001283 ORTHO05D001109 7.8e-21 105.1 245 41.6
Peaxi162Scf01123g00228 Petunia axillaris HOM05D030166 ORTHO05D001109 4.3e-19 99.4 68 80.9
Cc03_g02570 Coffea canephora HOM05D001283 ORTHO05D001109 1.1e-17 94.7 195 41.0
Sopen01g030850 Solanum pennellii HOM05D001283 ORTHO05D001109 2.0e-16 90.5 168 43.5
GSVIVG01022010001 Vitis vinifera HOM05D001283 ORTHO05D001109 7.6e-16 88.6 219 38.4
Solyc01g080660.3 Solanum lycopersicum HOM05D001283 ORTHO05D001109 1.7e-15 87.4 168 42.9
MELO3C006598.2 Cucumis melo HOM05D001283 ORTHO05D001109 1.9e-14 84.0 273 35.9
Peaxi162Scf01123g00222 Petunia axillaris HOM05D030166 ORTHO05D001109 4.1e-14 82.8 127 51.2
Hma1.2p1_0643F.1_g194620 Hydrangea macrophylla HOM05D001283 ORTHO05D001109 1.6e-13 80.9 267 35.6
TAR633G1837 Trochodendron aralioides HOM05D001283 ORTHO05D001109 4.6e-13 79.3 207 36.2
DCAR_003304 Daucus carota HOM05D001283 ORTHO05D001109 6.6e-12 75.5 178 41.6
Oeu010958.2 Olea europaea HOM05D001283 ORTHO05D001109 1.1e-11 74.7 62 71.0
Ciclev10005625m.g Citrus clementina HOM05D001283 ORTHO05D001109 1.9e-11 73.9 266 36.5
vmacro15277 Vaccinium macrocarpon HOM05D001283 ORTHO05D001109 5.6e-11 72.4 63 68.3
Prupe.1G144400 Prunus persica HOM05D001283 ORTHO05D001109 2.1e-10 70.5 250 35.2
SalBow5G0328 Salvia bowleyana HOM05D030166 ORTHO05D001109 6.2e-10 68.9 50 78.0
Ca_21557_v3 Cicer arietinum L. HOM05D001283 ORTHO05D001109 1.1e-09 68.2 154 45.5
Potri.010G026100 Populus trichocarpa HOM05D001283 ORTHO05D001109 1.8e-09 67.4 275 32.0
SGA_v2.0_scaffold142G35673 Striga asiatica HOM05D001283 ORTHO05D001109 1.2e-08 64.7 66 60.6
Aqoxy5G00595 Aquilegia oxysepala HOM05D001283 ORTHO05D001109 1.5e-08 64.3 196 34.7
Gorai.011G183900 Gossypium raimondii HOM05D001283 ORTHO05D001109 2.0e-08 63.9 193 34.7
Hma1.2p1_1671F.1_g296705 Hydrangea macrophylla HOM05D001283 ORTHO05D001109 3.4e-08 63.2 193 34.7
Manes.03G189500 Manihot esculenta HOM05D001283 ORTHO05D001109 3.4e-08 63.2 280 32.9
CiPaw.02G088000 Carya illinoinensis HOM05D001283 ORTHO05D001109 4.4e-08 62.8 235 35.7
PSO170G5418 Papaver somniferum HOM05D001283 ORTHO05D001109 5.8e-08 62.4 69 58.0
Hund24897 Selenicereus undatus HOM05D001283 ORTHO05D001109 5.8e-08 62.4 79 51.9
CiPaw.01G155400 Carya illinoinensis HOM05D001283 ORTHO05D001109 9.9e-08 61.6 197 35.5
TAR636G2521 Trochodendron aralioides HOM05D001283 ORTHO05D001109 9.9e-08 61.6 72 56.9
Rhsim04G0214200 Rhododendron simsii HOM05D001283 ORTHO05D001109 1.7e-07 60.8 50 76.0
Lalb_Chr07g0177531 Lupinus albus HOM05D001283 ORTHO05D001109 2.2e-07 60.5 236 33.5
Lj4g0004311 Lotus japonicus HOM05D001283 ORTHO05D001109 6.4e-07 58.9 70 54.3
CDE11G1051 Ceratophyllum demersum HOM05D001283 ORTHO05D001109 8.4e-07 58.5 209 37.3
FAN07G0347 Fragaria x ananassa HOM05D001283 ORTHO05D001109 8.4e-07 58.5 224 33.9
PSO210G7442 Papaver somniferum HOM05D001283 ORTHO05D001109 8.4e-07 58.5 73 52.1
CDE05G2235 Ceratophyllum demersum HOM05D001283 ORTHO05D001109 1.4e-06 57.8 77 54.5
TWI73G0638 Tripterygium wilfordii HOM05D001283 ORTHO05D001109 1.9e-06 57.4 235 33.2
Sed0005553 Sechium edule HOM05D001283 ORTHO05D001109 3.2e-06 56.6 190 37.4
Medtr4g118630 Medicago truncatula HOM05D001283 ORTHO05D001109 5.4e-06 55.8 85 47.1
HPP92_017193 Vanilla planifolia HOM05D001283 ORTHO05D001109 5.4e-06 55.8 75 53.3
HPP92_027339 Vanilla planifolia HOM05D001283 ORTHO05D001109 5.4e-06 55.8 75 53.3
Gohir.D10G164700 Gossypium hirsutum HOM05D001283 ORTHO05D001109 7.1e-06 55.5 295 30.2
CANSAT78G1728 Cannabis sativa HOM05D001283 ORTHO05D001109 9.3e-06 55.1 210 33.3
RcHm_v2.0_Chr4g0420501 Rosa chinensis HOM05D001283 ORTHO05D001109 9.3e-06 55.1 274 32.1
Sc25g0004640 Simmondsia chinensis HOM05D001283 ORTHO05D001109 9.3e-06 55.1 208 37.0


User provided reference genes

Program Settings