Gene: MELO3C006598.2

General Information

Structural Information

  • Species Cucumis melo
  • Gene Identifier MELO3C006598.2
  • Transcript Identifier MELO3C006598.2.1
  • Gene Type Coding gene
  • Location chr06 : 4456765-4461351 : positive

Gene Family Information

  • ID HOM05D001283
  • #Genes/#Species 488/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid MELO3C006598.2.1
  • uniprot A0A1S3AXW0

Descriptions

  • Description serine/arginine-rich SC35-like splicing factor SCL28
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007283
IEA
GOA Databasespermatogenesis
GO:0030154
IEA
GOA Databasecell differentiation
GO:0030261
IEA
GOA Databasechromosome condensation
GO:0000398
ISO
PLAZA Integrative OrthologymRNA splicing, via spliceosome AT5G18810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G18810

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005694
IEA
GOA Databasechromosome
GO:0000786
IEA
GOA Databasenucleosome
GO:0005634
IEA
GOA Databasenucleus
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT5G18810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR003954 RNA recognition motif domain, eukaryote
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
16.2.6.2 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (SCL28/30/33)