Gene: SGA_v2.0_scaffold142G35673

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold142G35673
  • Transcript Identifier SGA_v2.0_scaffold142T35673
  • Gene Type Coding gene
  • Location scaffold142 : 712070-714711 : positive

Gene Family Information

  • ID HOM05D001283
  • #Genes/#Species 488/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product SC35-like splicing factor family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT3G55460
GO:0000398
ISO
PLAZA Integrative OrthologymRNA splicing, via spliceosome AT5G18810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT3G55460
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G18810
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G55460

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G18810
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT5G18810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.2.6.2 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (SCL28/30/33)