Gene: Potri.010G026100
General Information
Structural Information
- Species Populus trichocarpa
- Gene Identifier Potri.010G026100
- Transcript Identifier Potri.010G026100.1
- Gene Type Coding gene
- Location Chr10 : 3800893-3804615 : negative
Gene Family Information
- ID HOM05D001283
- #Genes/#Species 488/96
- Phylogenetic origin
- ID ORTHO05D001109
- #Genes/#Species 483/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Potri.010G026100.v4.1
- pacid 42799519
- synonym POPTR_0010s02700
Descriptions
- Description KOG0130//KOG4207 - RNA-binding protein RBM8/Tsunagi (RRM superfamily) // Predicted splicing factor, SR protein superfamily
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000398 | ISO | PLAZA Integrative Orthology | mRNA splicing, via spliceosome | AT5G18810 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G18810 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G18810 |
| GO:0016607 | ISO | PLAZA Integrative Orthology | nuclear speck | AT5G18810 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.2.6.2 | RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (SCL28/30/33) |