Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 3.7e-205 718.0 366 100.0
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 9.8e-158 560.5 375 78.4
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 7.0e-156 554.3 375 77.3
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 2.7e-155 552.4 375 77.3
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 1.9e-153 546.2 357 80.4
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 2.8e-144 515.8 304 84.2
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 2.8e-112 409.5 404 57.4
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 9.0e-111 404.4 369 60.7
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 1.0e-109 401.0 371 58.2
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 9.3e-108 394.4 382 58.4
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 2.7e-107 392.9 390 57.7
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 4.6e-107 392.1 398 56.5
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 4.8e-104 382.1 397 54.9
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 6.9e-103 378.3 356 56.2
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 1.3e-101 374.0 347 56.5
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 2.2e-101 373.2 207 92.8
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 6.5e-101 371.7 374 55.1
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 1.1e-100 370.9 402 52.5
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 1.4e-100 370.5 377 56.2
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 1.9e-100 370.2 360 56.4
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 2.5e-100 369.8 399 55.1
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 3.2e-100 369.4 377 55.7
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 5.5e-100 368.6 402 53.7
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 1.6e-99 367.1 375 55.7
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 2.1e-99 366.7 355 54.6
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 6.1e-99 365.2 368 55.7
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 7.9e-99 364.8 375 54.7
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 1.0e-98 364.4 361 57.1
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 1.3e-98 364.0 387 54.3
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 5.1e-98 362.1 357 55.5
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 6.7e-98 361.7 369 56.4
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 4.3e-97 359.0 397 51.4
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 7.4e-97 358.2 364 56.6
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 3.7e-96 355.9 391 51.4
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 4.8e-96 355.5 373 53.9
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 1.8e-95 353.6 362 53.0
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 1.8e-95 353.6 373 54.4
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 2.4e-95 353.2 350 54.9
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 5.3e-95 352.1 380 51.8
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 5.3e-95 352.1 356 54.5
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 6.9e-95 351.7 362 52.8
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 6.9e-95 351.7 372 53.8
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 9.0e-95 351.3 358 54.5
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 9.0e-95 351.3 365 55.9
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 1.5e-94 350.5 394 51.5
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 2.6e-94 349.7 377 50.7
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 7.7e-94 348.2 369 52.3
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 7.7e-94 348.2 388 51.5
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 1.0e-93 347.8 393 52.4
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 1.3e-93 347.4 397 48.9
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 1.3e-93 347.4 382 51.0
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 2.2e-93 346.7 384 50.8
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 5.0e-93 345.5 368 53.0
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 5.0e-93 345.5 369 53.9
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 6.5e-93 345.1 364 53.8
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 8.5e-93 344.7 385 51.4
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 8.5e-93 344.7 351 55.8
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 8.5e-93 344.7 394 49.0
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 1.1e-92 344.4 358 53.4
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 1.9e-92 343.6 374 52.9
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 2.5e-92 343.2 388 51.3
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 3.2e-92 342.8 377 52.3
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 3.2e-92 342.8 377 53.1
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 1.2e-91 340.9 383 52.5
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 3.6e-91 339.3 363 52.1
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 3.0e-90 336.3 360 52.8
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 3.9e-90 335.9 395 49.4
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 6.7e-90 335.1 363 52.1
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 1.5e-89 334.0 352 52.6
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 2.6e-89 333.2 345 52.2
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 4.4e-89 332.4 352 52.3
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 4.4e-89 332.4 375 50.9
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 7.4e-89 331.6 352 52.6
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 1.3e-88 330.9 356 51.7
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 1.3e-88 330.9 356 51.7
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 8.2e-88 328.2 368 52.2
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 4.1e-87 325.9 352 51.4
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 9.1e-87 324.7 359 52.6
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 1.2e-86 324.3 374 50.8
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 5.9e-86 322.0 332 52.7
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 2.3e-82 310.1 345 52.8
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 3.0e-82 309.7 367 50.4
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 5.2e-82 308.9 365 52.1
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 1.1e-79 301.2 458 41.9
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 4.1e-79 299.3 376 48.9
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 1.9e-76 290.4 276 55.1
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 8.0e-75 285.0 336 47.6
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 3.3e-73 279.6 368 45.1
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 1.7e-64 250.8 341 41.1
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 2.0e-62 243.8 561 33.0
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 4.5e-62 242.7 292 46.9
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 1.1e-60 238.0 270 48.5
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 9.8e-57 224.9 241 51.5
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 1.1e-52 211.5 310 36.5
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 2.1e-51 207.2 193 60.6
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 1.5e-49 201.1 225 52.0
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 1.2e-46 191.4 367 34.1
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 2.0e-46 190.7 195 54.9
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 6.6e-45 185.7 179 57.5
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 8.6e-45 185.3 112 76.8
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 2.5e-44 183.7 374 35.6
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 5.6e-36 156.0 185 47.0
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 5.6e-36 156.0 156 53.2
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 3.1e-34 150.2 190 44.2
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 5.4e-31 139.4 95 58.9
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 1.3e-29 134.8 113 60.2
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 5.6e-28 129.4 120 60.0
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 1.2e-27 128.3 249 37.3
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 2.3e-21 107.5 145 44.1
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 9.6e-12 75.5 103 35.9


User provided reference genes

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