Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001761g0220 Nicotiana tabacum HOM05D000216 ORTHO05D000634 4.5e-118 427.9 218 100.0
Peaxi162Scf00379g00084 Petunia axillaris HOM05D000216 ORTHO05D000634 1.3e-85 320.1 201 82.6
CAN.G1180.14 Capsicum annuum HOM05D000216 ORTHO05D000634 2.3e-85 319.3 201 82.6
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 2.3e-85 319.3 201 82.6
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.6e-85 317.8 201 82.1
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.6e-85 317.8 201 82.1
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.6e-85 317.8 201 82.1
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.6e-85 317.8 201 82.1
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.6e-85 317.8 201 82.1
PGSC0003DMG400017664 Solanum tuberosum HOM05D000216 ORTHO05D000634 3.3e-84 315.5 201 81.6
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 8.1e-83 310.8 201 80.1
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 4.0e-82 308.5 201 79.1
HanXRQChr00c0601g0576531 Helianthus annuus HOM05D000216 ORTHO05D000634 6.8e-82 307.8 201 79.1
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 6.8e-82 307.8 201 79.1
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 6.8e-82 307.8 201 79.1
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 6.8e-82 307.8 201 79.1
Lsat_1_v5_gn_1_6760 Lactuca sativa HOM05D003214 ORTHO05D004330 1.2e-81 307.0 201 79.6
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 1.2e-81 307.0 201 79.6
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 2.6e-81 305.8 201 78.6
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 2.6e-81 305.8 201 78.6
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 3.4e-81 305.4 200 80.0
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 5.8e-81 304.7 201 79.1
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 5.8e-81 304.7 201 79.1
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 7.6e-81 304.3 201 79.1
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 9.9e-81 303.9 217 75.6
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 1.3e-80 303.5 201 77.1
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 2.2e-80 302.8 202 77.7
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 4.9e-80 301.6 201 77.1
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 4.9e-80 301.6 201 77.6
CAN.G612.1 Capsicum annuum HOM05D000216 ORTHO05D000634 8.4e-80 300.8 200 79.5
Eucgr.K02695 Eucalyptus grandis HOM05D000216 ORTHO05D000634 8.4e-80 300.8 201 78.1
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 1.4e-79 300.1 202 76.7
CDE07G0287 Ceratophyllum demersum HOM05D003429 ORTHO05D003873 2.4e-79 299.3 201 77.6
Ah.10g028500 Amaranthus hybridus HOM05D000216 ORTHO05D000634 9.2e-79 297.4 200 78.0
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 9.2e-79 297.4 200 77.5
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 1.2e-78 297.0 201 76.1
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 2.7e-78 295.8 201 76.6
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 4.6e-78 295.0 200 77.5
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 4.6e-78 295.0 200 77.5
SGA_v2.0_scaffold119G32689 Striga asiatica HOM05D000216 ORTHO05D000634 2.3e-77 292.7 200 76.5
CsaV3_UNG207810 Cucumis sativus L. HOM05D000216 ORTHO05D000634 3.0e-77 292.4 202 77.7
Psat5g134640 Pisum sativum HOM05D000216 ORTHO05D000634 3.9e-77 292.0 201 73.6
RhsimPtG0004600 Rhododendron simsii HOM05D000743 ORTHO05D000580 8.6e-77 290.8 209 73.7
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-76 289.3 201 75.1
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-76 289.3 201 75.1
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-76 289.3 201 75.1
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-76 289.3 201 75.1
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-76 289.3 201 75.1
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-76 289.3 201 75.1
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-76 289.3 201 75.1
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-76 289.3 201 75.1
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-76 289.3 201 75.1
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-76 289.3 201 75.1
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.5e-76 289.3 201 75.1
Sc07g0006590 Simmondsia chinensis HOM05D000216 ORTHO05D000634 2.5e-76 289.3 198 76.8
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 4.3e-76 288.5 202 74.8
Hund27917 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.6e-76 288.1 200 75.5
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 9.6e-76 287.3 201 74.1
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 1.2e-75 287.0 202 75.2
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 3.1e-74 282.3 200 74.5
Zm00001eb314280 Zea mays HOM05D000216 ORTHO05D000634 2.6e-73 279.3 200 73.5
Zm00001eb435270 Zea mays HOM05D000216 ORTHO05D000634 2.6e-73 279.3 200 73.5
Zm00001eb435480 Zea mays HOM05D000216 ORTHO05D000634 2.6e-73 279.3 200 73.5
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 2.6e-73 279.3 200 73.5
Zm00001eb437260 Zea mays HOM05D000216 ORTHO05D000634 2.6e-73 279.3 200 73.5
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 2.9e-72 275.8 187 78.1
Medtr7g116700 Medicago truncatula HOM05D000216 ORTHO05D000634 3.8e-72 275.4 194 74.2
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 6.4e-72 274.6 201 71.6
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 1.9e-71 273.1 201 73.6
AUR62030122 Chenopodium quinoa HOM05D000216 ORTHO05D000634 9.3e-71 270.8 209 70.3
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.6e-70 270.0 184 76.1
Lj2C1239G21 Lonicera japonica HOM05D000216 ORTHO05D000634 1.1e-68 263.8 182 75.8
Psat2g044360 Pisum sativum HOM05D000216 ORTHO05D000634 2.8e-67 259.2 184 71.7
Psat4g062520 Pisum sativum HOM05D000216 ORTHO05D003518 1.4e-66 256.9 205 66.8
Gohir.D12G094332 Gossypium hirsutum HOM05D000216 ORTHO05D000634 8.4e-64 247.7 180 74.4
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 5.4e-63 245.0 188 72.9
Gorai.008G102500 Gossypium raimondii HOM05D000216 ORTHO05D000634 6.0e-62 241.5 180 72.8
Medtr7g069560 Medicago truncatula HOM05D000216 ORTHO05D000634 1.3e-61 240.4 194 67.0
HanXRQChr14g0454991 Helianthus annuus HOM05D000216 ORTHO05D000634 1.1e-60 237.3 185 68.6
Lsat_1_v5_gn_4_51820 Lactuca sativa HOM05D000216 ORTHO05D009870 2.8e-59 232.6 164 75.6
SGA_v2.0_scaffold477G52216 Striga asiatica HOM05D000216 ORTHO05D000634 3.6e-59 232.3 160 75.0
HanXRQChr00c0313g0573461 Helianthus annuus HOM05D000216 ORTHO05D000634 8.1e-59 231.1 134 86.6
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 8.1e-59 231.1 183 70.5
Gohir.A05G086066 Gossypium hirsutum HOM05D000216 ORTHO05D000634 2.4e-58 229.6 134 86.6
Manes.01G046800 Manihot esculenta HOM05D000216 ORTHO05D000634 3.1e-58 229.2 154 76.6
QL93p0837_0001 Quercus lobata HOM05D000216 ORTHO05D000634 9.0e-58 227.6 134 85.8
AUR62030170 Chenopodium quinoa HOM05D000216 ORTHO05D000634 1.4e-55 220.3 134 84.3
AUR62021208 Chenopodium quinoa HOM05D000216 ORTHO05D000634 2.4e-55 219.5 134 84.3
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 2.4e-55 219.5 200 61.0
BraSC140t45598Z Brassica rapa HOM05D000216 ORTHO05D000634 7.9e-54 214.5 145 75.9
Medtr5g098620 Medicago truncatula HOM05D000216 ORTHO05D000634 1.0e-53 214.2 136 77.9
Sc11g0005800 Simmondsia chinensis HOM05D000216 ORTHO05D000634 1.0e-53 214.2 134 81.3
Gorai.013G017900 Gossypium raimondii HOM05D000216 ORTHO05D000634 6.7e-53 211.5 134 81.3
AUR62042525 Chenopodium quinoa HOM05D000216 ORTHO05D000580 8.7e-53 211.1 200 61.0
Gohir.D01G206650 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.0e-48 197.6 148 72.3
HanXRQChr00c0300g0573181 Helianthus annuus HOM05D000216 ORTHO05D000634 5.5e-47 191.8 175 64.6
Migut.F01072 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.6e-43 180.3 113 77.9
EL10Ac3g05558 Beta vulgaris HOM05D000216 ORTHO05D000634 2.1e-43 179.9 148 66.9
Hund15943 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-40 171.0 144 64.6
CAN.G939.13 Capsicum annuum HOM05D000216 ORTHO05D000634 2.9e-40 169.5 116 75.0
Nitab4.5_0016036g0020 Nicotiana tabacum HOM05D000216 ORTHO05D000634 3.8e-40 169.1 116 78.4
Hund12594 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.5e-39 165.2 207 49.3
MELO3C001268.2 Cucumis melo HOM05D000216 ORTHO05D000634 1.6e-38 163.7 95 88.4
MELO3C028015.2 Cucumis melo HOM05D000216 ORTHO05D000634 1.6e-38 163.7 95 88.4
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 3.6e-38 162.5 115 72.2
MELO3C028016.2 Cucumis melo HOM05D000216 ORTHO05D000634 8.7e-37 157.9 95 86.3
Glyma.02G221400 Glycine max HOM05D000216 ORTHO05D000634 3.7e-35 152.5 127 59.8
Lsat_1_v5_gn_3_118000 Lactuca sativa HOM05D000216 ORTHO05D000634 4.1e-34 149.1 109 70.6
Oeu012802.1 Olea europaea HOM05D000216 ORTHO05D000634 1.5e-33 147.1 93 81.7
CAN.G213.14 Capsicum annuum HOM05D000216 ORTHO05D000634 1.0e-32 144.4 79 86.1
Migut.D01414 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.1e-31 141.0 79 89.9
CAN.G100.42 Capsicum annuum HOM05D000216 ORTHO05D000634 4.2e-31 139.0 87 79.3
Pp3c7_4990 Physcomitrium patens HOM05D000216 ORTHO05D000634 7.2e-31 138.3 124 56.5
HanXRQChr00c0988g0578131 Helianthus annuus HOM05D000216 ORTHO05D000634 9.4e-31 137.9 98 70.4
Migut.D01340 Erythranthe guttata HOM05D000216 ORTHO05D000634 6.7e-29 131.7 112 63.4
Gohir.D03G089666 Gossypium hirsutum HOM05D000216 ORTHO05D000634 8.2e-27 124.8 96 66.7
SMO086G0013 Selaginella moellendorffii HOM05D000216 ORTHO05D000634 2.4e-26 123.2 201 40.8
Gorai.003G071700 Gossypium raimondii HOM05D000216 ORTHO05D000634 5.3e-26 122.1 96 64.6
Lalb_Chr07g0192701 Lupinus albus HOM05D000216 ORTHO05D000634 1.4e-23 114.0 86 73.3
Solyc04g018250.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.2e-23 112.5 90 66.7
CAN.G511.9 Capsicum annuum HOM05D000216 ORTHO05D000634 7.2e-23 111.7 80 70.0
HanXRQChr15g0470971 Helianthus annuus HOM05D000216 ORTHO05D000634 2.7e-22 109.8 68 82.4
Lj1g0027665 Lotus japonicus HOM05D000216 ORTHO05D000634 7.9e-22 108.2 103 55.3
HanXRQChr00c0125g0571741 Helianthus annuus HOM05D000216 ORTHO05D000634 2.3e-21 106.7 61 88.5
HanXRQChr07g0188311 Helianthus annuus HOM05D000216 ORTHO05D000634 2.3e-21 106.7 61 88.5
HanXRQChr09g0238301 Helianthus annuus HOM05D000216 ORTHO05D000634 2.3e-21 106.7 61 88.5
HanXRQChr10g0282521 Helianthus annuus HOM05D000216 ORTHO05D000634 2.3e-21 106.7 61 88.5
QL08p049862 Quercus lobata HOM05D000216 ORTHO05D000634 5.2e-21 105.5 64 82.8
Hma1.2p1_3151F.1_g333240 Hydrangea macrophylla HOM05D000175 ORTHO05D000481 8.8e-21 104.8 61 86.9
Gohir.A09G103316 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.1e-20 104.4 61 88.5
CAN.G219.16 Capsicum annuum HOM05D000743 ORTHO05D000580 2.0e-20 103.6 61 88.5
HanXRQChr12g0386351 Helianthus annuus HOM05D000216 ORTHO05D000634 2.6e-20 103.2 61 85.2
HanXRQChr12g0386361 Helianthus annuus HOM05D000216 ORTHO05D000634 1.3e-19 100.9 61 83.6
Nn092s42879 Nelumbo nucifera HOM05D000216 ORTHO05D000634 1.3e-19 100.9 61 83.6
CAN.G939.12 Capsicum annuum HOM05D000216 ORTHO05D000634 2.2e-19 100.1 57 89.5
Solyc12g062650.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.2e-19 100.1 84 60.7
MD09G1229200 Malus domestica HOM05D000216 ORTHO05D003518 2.8e-19 99.8 68 75.0
HanXRQChr12g0386341 Helianthus annuus HOM05D000216 ORTHO05D000634 6.3e-19 98.6 61 82.0
Lj2C1237G0 Lonicera japonica HOM05D000216 ORTHO05D003638 6.3e-19 98.6 60 83.3
HanXRQChr00c0823g0577631 Helianthus annuus HOM05D000216 ORTHO05D000634 2.4e-18 96.7 56 80.4
MELO3C032363.2 Cucumis melo HOM05D000216 ORTHO05D000634 3.1e-18 96.3 61 80.3
Solyc07g021290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.1e-18 95.9 52 86.5
Solyc08g028900.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.1e-18 95.9 61 83.6
Hund04025 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.3e-18 95.5 84 60.7
HanXRQChr07g0188321 Helianthus annuus HOM05D000216 ORTHO05D000634 9.1e-18 94.7 61 75.4
Nn3g18459 Nelumbo nucifera HOM05D000216 ORTHO05D000634 9.1e-18 94.7 61 80.3
Atru.chr6.1615 Acer truncatum HOM05D000216 ORTHO05D000634 3.5e-17 92.8 74 62.2
Gohir.D10G123250 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.7e-16 90.5 83 57.8
arahy.Tifrunner.gnm1.ann1.8W122S Arachis hypogaea HOM05D000216 ORTHO05D000634 1.9e-15 87.0 103 47.6
Gorai.011G135800 Gossypium raimondii HOM05D000216 ORTHO05D000634 1.9e-15 87.0 60 73.3
Nitab4.5_0016007g0020 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.9e-15 87.0 74 67.6
Gorai.004G210400 Gossypium raimondii HOM05D000216 ORTHO05D000634 2.5e-15 86.7 44 90.9
SGA_v2.0_scaffold132G34498 Striga asiatica HOM05D000216 ORTHO05D000634 4.2e-15 85.9 46 84.8
Gohir.D08G199601 Gossypium hirsutum HOM05D000216 ORTHO05D000634 7.2e-15 85.1 46 84.8
Lalb_Chr13g0292901 Lupinus albus HOM05D000216 ORTHO05D000634 7.2e-15 85.1 46 87.0
Gorai.013G018800 Gossypium raimondii HOM05D000216 ORTHO05D000634 9.4e-15 84.7 46 87.0
PGSC0003DMG400020297 Solanum tuberosum HOM05D000216 ORTHO05D000634 9.4e-15 84.7 57 77.2
Gohir.D13G016950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 3.6e-14 82.8 46 84.8
Migut.K00966 Erythranthe guttata HOM05D000216 ORTHO05D000634 4.7e-14 82.4 51 70.6
TPR.G26480 Trifolium pratense HOM05D000216 ORTHO05D000634 4.7e-14 82.4 46 76.1
Gorai.002G075300 Gossypium raimondii HOM05D000216 ORTHO05D000634 6.7e-13 78.6 38 94.7
Solyc08g028910.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.7e-13 78.6 45 84.4
AUR62041877 Chenopodium quinoa HOM05D000216 ORTHO05D000634 8.8e-13 78.2 102 50.0
arahy.Tifrunner.gnm1.ann1.EI2YTD Arachis hypogaea HOM05D000890 ORTHO05D000697 2.0e-12 77.0 46 80.4
CAN.G1542.7 Capsicum annuum HOM05D000216 ORTHO05D000634 2.6e-12 76.6 54 74.1
Dinv08908 Davidia involucrata HOM05D000216 ORTHO05D000634 4.4e-12 75.9 40 92.5
arahy.Tifrunner.gnm1.ann1.7FJY1D Arachis hypogaea HOM05D000216 ORTHO05D000634 9.7e-12 74.7 54 66.7
CSS0009554 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D000634 9.7e-12 74.7 43 86.0
Lsat_1_v5_gn_4_163961 Lactuca sativa HOM05D000216 ORTHO05D003518 1.3e-11 74.3 43 86.0
Lalb_Chr06g0173101 Lupinus albus HOM05D000216 ORTHO05D000634 2.2e-11 73.6 46 73.9
Nitab4.5_0004184g0070 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.1e-10 71.2 83 50.6
HPP92_007917 Vanilla planifolia HOM05D000216 ORTHO05D000634 1.4e-10 70.9 44 77.3
HPP92_016025 Vanilla planifolia HOM05D000216 ORTHO05D000634 9.1e-10 68.2 46 69.6
CAN.G1265.2 Capsicum annuum HOM05D000216 ORTHO05D000634 2.7e-09 66.6 37 83.8
HanXRQChr11g0322741 Helianthus annuus HOM05D000216 ORTHO05D000634 2.7e-09 66.6 43 76.7
Lalb_Chr23g0274571 Lupinus albus HOM05D000216 ORTHO05D000634 7.7e-09 65.1 35 82.9
Lsat_1_v5_gn_3_118020 Lactuca sativa HOM05D000216 ORTHO05D000634 1.7e-08 63.9 43 74.4
Oeu010681.1 Olea europaea HOM05D000216 ORTHO05D000634 2.9e-08 63.2 95 42.1
Gohir.A07G183950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 3.8e-08 62.8 30 93.3
SEGI_15522 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 3.8e-08 62.8 70 47.1
Nitab4.5_0000373g0230 Nicotiana tabacum HOM05D000216 ORTHO05D000634 6.5e-08 62.0 43 69.8
Oeu023333.1 Olea europaea HOM05D000216 ORTHO05D000634 1.5e-07 60.8 44 68.2
SGA_v2.0_scaffold69G23193 Striga asiatica HOM05D000216 ORTHO05D000634 5.5e-07 58.9 55 50.9


User provided reference genes

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