Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001283g0060 Nicotiana tabacum HOM05D007300 ORTHO05D009301 0.0e+00 1382.1 691 100.0
Nitab4.5_0003714g0040 Nicotiana tabacum HOM05D007300 ORTHO05D009301 0.0e+00 1273.8 686 94.2
Solyc02g071280.3 Solanum lycopersicum HOM05D007300 ORTHO05D009301 0.0e+00 1082.4 665 83.9
PGSC0003DMG400003073 Solanum tuberosum HOM05D007300 ORTHO05D009301 0.0e+00 1080.9 660 84.5
Sopen02g020340 Solanum pennellii HOM05D007300 ORTHO05D009301 9.5e-312 1073.2 663 83.4
CAN.G257.51 Capsicum annuum HOM05D007300 ORTHO05D009301 2.8e-307 1058.1 664 82.5
Peaxi162Scf00649g00027 Petunia axillaris HOM05D007300 ORTHO05D009301 2.9e-296 1021.5 613 85.2
Dinv32299 Davidia involucrata HOM05D007300 ORTHO05D009301 3.6e-217 758.8 657 60.6
CSS0020184 Camellia sinensis var. sinensis HOM05D007300 ORTHO05D009301 1.0e-211 740.7 662 58.9
Oeu021524.1 Olea europaea HOM05D007300 ORTHO05D009301 4.4e-207 725.3 596 62.6
Thecc.06G157700 Theobroma cacao HOM05D007300 ORTHO05D009301 1.1e-205 720.7 662 56.8
Cfa001024 Carpinus fangiana HOM05D007300 ORTHO05D009301 2.0e-204 716.5 662 59.1
CiPaw.10G096200 Carya illinoinensis HOM05D007300 ORTHO05D009301 7.7e-204 714.5 666 57.5
Actinidia19486 Actinidia chinensis HOM05D007300 ORTHO05D009301 8.5e-203 711.1 666 57.4
QL05p060322 Quercus lobata HOM05D007300 ORTHO05D009301 2.3e-200 703.0 666 56.6
TAR627G1006 Trochodendron aralioides HOM05D007300 ORTHO05D009301 1.1e-199 700.7 660 56.5
GSVIVG01021378001 Vitis vinifera HOM05D007300 ORTHO05D009301 2.0e-199 699.9 664 55.6
RcHm_v2.0_Chr5g0012901 Rosa chinensis HOM05D007300 ORTHO05D009301 1.6e-196 690.3 664 56.2
Potri.001G353800 Populus trichocarpa HOM05D007300 ORTHO05D009301 5.9e-196 688.3 603 57.9
Gohir.D10G038600 Gossypium hirsutum HOM05D007300 ORTHO05D009301 7.7e-196 688.0 670 56.1
Prupe.4G073700 Prunus persica HOM05D007300 ORTHO05D009301 7.7e-196 688.0 667 56.4
Gorai.011G040700 Gossypium raimondii HOM05D007300 ORTHO05D009301 1.0e-195 687.6 670 56.3
TWI73G0852 Tripterygium wilfordii HOM05D007300 ORTHO05D009301 2.9e-195 686.0 664 54.2
Migut.M00959 Erythranthe guttata HOM05D007300 ORTHO05D009301 3.8e-195 685.6 665 55.6
FvH4_3g06410 Fragaria vesca HOM05D007300 ORTHO05D009301 2.5e-194 682.9 665 55.2
MD05G1291800 Malus domestica HOM05D007300 ORTHO05D009301 1.6e-193 680.2 695 54.0
FAN21G2574 Fragaria x ananassa HOM05D007300 ORTHO05D009301 1.8e-192 676.8 665 54.9
Lsat_1_v5_gn_7_31040 Lactuca sativa HOM05D007300 ORTHO05D009301 8.8e-192 674.5 660 55.3
Gohir.A10G037600 Gossypium hirsutum HOM05D007300 ORTHO05D009301 1.2e-191 674.1 671 55.3
HanXRQChr04g0119571 Helianthus annuus HOM05D007300 ORTHO05D009301 2.0e-191 673.3 657 55.1
Haze_05485 Corylus avellana HOM05D007300 ORTHO05D009301 9.7e-191 671.0 767 52.0
ECA236G2360 Erigeron canadensis HOM05D007300 ORTHO05D009301 1.4e-189 667.2 666 54.2
Manes.17G064900 Manihot esculenta HOM05D007300 ORTHO05D009301 4.5e-188 662.1 666 53.5
Sabra16G0232700 Salix brachista HOM05D007300 ORTHO05D009301 1.7e-187 660.2 622 55.9
Ciclev10014510m.g Citrus clementina HOM05D007300 ORTHO05D009301 2.9e-187 659.4 667 52.8
SalBow8G1735 Salvia bowleyana HOM05D007300 ORTHO05D009301 2.9e-187 659.4 610 57.0
COL.COLO4_22798 Corchorus olitorius HOM05D007300 ORTHO05D009301 3.8e-187 659.1 681 53.7
Lj1C1181T32 Lonicera japonica HOM05D007300 ORTHO05D009301 1.1e-186 657.5 655 54.8
SGA_v2.0_scaffold1G00132 Striga asiatica HOM05D007300 ORTHO05D009301 2.5e-186 656.4 669 54.0
FAN11G2841 Fragaria x ananassa HOM05D007300 ORTHO05D009301 1.6e-185 653.7 726 50.4
Cpa.g.sc17.110 Carica papaya HOM05D007300 ORTHO05D009301 5.7e-183 645.2 646 53.3
CANSAT35G1474 Cannabis sativa HOM05D007300 ORTHO05D009301 1.8e-181 640.2 678 54.1
DCAR_027959 Daucus carota HOM05D007300 ORTHO05D009301 1.2e-180 637.5 598 57.0
ClCG03G007190 Citrullus lanatus HOM05D007300 ORTHO05D009301 1.6e-180 637.1 660 52.3
Atru.chr10.1398 Acer truncatum HOM05D007300 ORTHO05D009301 1.3e-179 634.0 558 59.7
Atru.chr10.1407 Acer truncatum HOM05D007300 ORTHO05D009301 1.7e-179 633.6 557 59.6
CsaV3_1G032780 Cucumis sativus L. HOM05D007300 ORTHO05D009301 1.1e-178 630.9 591 55.8
Glyma.08G121900 Glycine max HOM05D007300 ORTHO05D009301 2.5e-178 629.8 647 53.0
Glyma.05G164500 Glycine max HOM05D007300 ORTHO05D009301 2.8e-177 626.3 655 52.5
Aqoxy1G01857 Aquilegia oxysepala HOM05D007300 ORTHO05D009301 1.4e-176 624.0 643 51.3
Duzib235G1110 Durio zibethinus HOM05D007300 ORTHO05D009301 6.8e-176 621.7 663 51.0
Eucgr.D00343 Eucalyptus grandis HOM05D007300 ORTHO05D009301 1.3e-174 617.5 581 55.1
Medtr8g088030 Medicago truncatula HOM05D007300 ORTHO05D009301 2.8e-174 616.3 618 53.4
Lalb_Chr13g0295471 Lupinus albus HOM05D007300 ORTHO05D009301 1.4e-173 614.0 642 52.3
arahy.Tifrunner.gnm1.ann1.D64P8M Arachis hypogaea HOM05D007300 ORTHO05D009301 2.4e-173 613.2 626 55.0
Lj4g0024386 Lotus japonicus HOM05D007300 ORTHO05D009301 2.4e-173 613.2 651 52.1
arahy.Tifrunner.gnm1.ann1.FQ35JE Arachis hypogaea HOM05D007300 ORTHO05D009301 9.2e-173 611.3 632 54.1
THA.LOC104827733 Tarenaya hassleriana HOM05D007300 ORTHO05D009301 1.0e-171 607.8 671 49.9
Sc05g0006590 Simmondsia chinensis HOM05D007300 ORTHO05D009301 1.9e-170 603.6 668 49.3
Ca_17871_v3 Cicer arietinum L. HOM05D007300 ORTHO05D009301 5.6e-170 602.1 592 54.2
Nn3g20905 Nelumbo nucifera HOM05D007300 ORTHO05D009301 9.5e-170 601.3 602 53.8
Phvul.002G244500 Phaseolus vulgaris HOM05D007300 ORTHO05D009301 9.5e-170 601.3 598 52.5
MBI10_g02388_MAGBIO Magnolia biondii HOM05D007300 ORTHO05D009301 1.0e-168 597.8 617 50.7
TPR.G6793 Trifolium pratense HOM05D007300 ORTHO05D009301 1.0e-168 597.8 595 53.6
Thhalv10000812m.g Eutrema salsugineum HOM05D007300 ORTHO05D009301 3.0e-168 596.3 677 48.7
AT5G46420 Arabidopsis thaliana HOM05D007300 ORTHO05D009301 5.8e-167 592.0 673 49.2
CARHR175340 Cardamine hirsuta HOM05D007300 ORTHO05D009301 5.8e-167 592.0 673 49.3
PSO541G4163 Papaver somniferum HOM05D007300 ORTHO05D009301 1.7e-166 590.5 609 51.4
Sp2g11270 Schrenkiella parvula HOM05D007300 ORTHO05D009301 1.7e-166 590.5 677 48.3
VMungo0251G3397 Vigna mungo HOM05D007300 ORTHO05D009301 8.3e-166 588.2 626 51.8
Carub.0008s0147 Capsella rubella HOM05D007300 ORTHO05D009301 5.4e-165 585.5 671 47.7
A06p45940 Brassica napus HOM05D007300 ORTHO05D009301 7.0e-165 585.1 680 48.5
Aa31LG9G6430 Aethionema arabicum HOM05D007300 ORTHO05D009301 3.5e-164 582.8 676 48.1
BolC7t43517H Brassica oleracea HOM05D007300 ORTHO05D009301 1.3e-163 580.9 673 48.0
C07p29650 Brassica napus HOM05D007300 ORTHO05D009301 1.7e-163 580.5 673 47.8
AL8G11990 Arabidopsis lyrata HOM05D007300 ORTHO05D009301 3.3e-162 576.2 670 47.2
AUR62027555 Chenopodium quinoa HOM05D007300 ORTHO05D009301 4.3e-162 575.9 616 49.7
BraA06t27457Z Brassica rapa HOM05D007300 ORTHO05D009301 1.6e-161 573.9 665 48.9
Psat7g066760 Pisum sativum HOM05D007300 ORTHO05D009301 4.7e-161 572.4 633 49.1
PGR044G1273 Punica granatum HOM05D007300 ORTHO05D009301 5.8e-159 565.5 554 54.3
AUR62035801 Chenopodium quinoa HOM05D007300 ORTHO05D009301 1.9e-157 560.5 606 49.2
EL10Ac8g19794 Beta vulgaris HOM05D007300 ORTHO05D009301 9.0e-136 488.4 605 44.8
FAN16G1565 Fragaria x ananassa HOM05D007300 ORTHO05D009301 7.6e-135 485.3 480 55.8
ATR1153G036 Amborella trichopoda HOM05D007300 ORTHO05D009301 3.2e-133 479.9 625 44.2
HPP92_023296 Vanilla planifolia HOM05D007300 ORTHO05D009301 1.9e-130 470.7 678 41.0
unitig_92.g28150 Utricularia gibba HOM05D007300 ORTHO05D009301 6.7e-123 445.7 556 45.7
Sed0024786 Sechium edule HOM05D007300 ORTHO05D009301 1.8e-112 411.0 403 55.8
PSO675G3105 Papaver somniferum HOM05D007300 ORTHO05D009301 2.4e-104 384.0 360 56.4
SEGI_38698 Sequoiadendron giganteum HOM05D007300 ORTHO05D009301 5.1e-99 366.3 670 33.3
HPP92_023271 Vanilla planifolia HOM05D007300 ORTHO05D009301 1.3e-89 335.1 675 33.5
MELO3C002704.2 Cucumis melo HOM05D007300 ORTHO05D009301 2.6e-79 300.8 347 47.0
Mapoly0019s0078 Marchantia polymorpha HOM05D007300 ORTHO05D009301 5.2e-75 286.6 667 28.9
CDE06G2820 Ceratophyllum demersum HOM05D007300 ORTHO05D009301 2.2e-73 281.2 326 48.2
Zm00001eb296050 Zea mays HOM05D007300 ORTHO05D009301 6.3e-73 279.6 329 45.9
Pp3c15_14250 Physcomitrium patens HOM05D007300 ORTHO05D009301 2.5e-69 267.7 583 30.4
AagrBONN_evm.TU.Sc2ySwM_228.1844 Anthoceros agrestis HOM05D007300 ORTHO05D004905 6.1e-68 263.1 534 34.6
Os05g0566300 Oryza sativa ssp. japonica HOM05D007300 ORTHO05D009301 9.2e-56 222.6 286 44.1
Zm00001eb349440 Zea mays HOM05D007300 ORTHO05D009301 1.8e-43 181.8 177 49.7
Gohir.D08G088700 Gossypium hirsutum HOM05D007300 ORTHO05D009301 7.8e-39 166.4 167 52.7
Gorai.004G093400 Gossypium raimondii HOM05D007300 ORTHO05D009301 7.8e-39 166.4 167 52.7
SEGI_17563 Sequoiadendron giganteum HOM05D007300 ORTHO05D009301 2.0e-34 151.8 131 53.4
MCO05G669 Micromonas commoda HOM05D007300 ORTHO05D009301 1.9e-24 118.6 227 34.8
CDE06G1765 Ceratophyllum demersum HOM05D007300 ORTHO05D009301 4.8e-20 104.0 157 38.2
Zm00001eb184690 Zea mays HOM05D007300 ORTHO05D009301 4.8e-20 104.0 83 55.4
Cre03.g191950 Chlamydomonas reinhardtii HOM05D007300 ORTHO05D009301 9.0e-19 99.8 210 31.4
Os08g0206900 Oryza sativa ssp. japonica HOM05D003927 ORTHO05D004905 1.3e-06 59.3 204 25.0
Cfa023099 Carpinus fangiana HOM05D003927 ORTHO05D004905 1.8e-06 58.9 210 22.4


User provided reference genes

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