Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000904g0190 Nicotiana tabacum HOM05D004874 ORTHO05D006796 1.8e-75 285.8 143 100.0
Nitab4.5_0000156g0190 Nicotiana tabacum HOM05D004874 ORTHO05D006796 2.7e-18 95.9 46 95.7
Peaxi162Scf00323g00112 Petunia axillaris HOM05D004874 ORTHO05D006796 6.0e-18 94.7 46 93.5
CAN.G1728.1 Capsicum annuum HOM05D004874 ORTHO05D006796 1.3e-17 93.6 46 91.3
PGSC0003DMG400012951 Solanum tuberosum HOM05D004874 ORTHO05D006796 3.0e-17 92.4 46 91.3
MSTRG.2539 Avicennia marina HOM05D004874 ORTHO05D006796 5.0e-17 91.7 46 91.3
SalBow6G4347 Salvia bowleyana HOM05D004874 ORTHO05D006796 6.6e-17 91.3 45 93.3
Dinv19497 Davidia involucrata HOM05D004874 ORTHO05D006796 1.5e-16 90.1 46 91.3
VMungo1309G2704 Vigna mungo HOM05D004874 ORTHO05D006796 1.9e-16 89.7 46 89.1
Oeu028379.4 Olea europaea HOM05D004874 ORTHO05D006796 2.5e-16 89.4 46 87.0
Oeu030684.1 Olea europaea HOM05D004874 ORTHO05D006796 2.5e-16 89.4 46 87.0
CSS0018271 Camellia sinensis var. sinensis HOM05D004874 ORTHO05D006796 3.3e-16 89.0 46 89.1
Phvul.009G140100 Phaseolus vulgaris HOM05D004874 ORTHO05D006796 3.3e-16 89.0 46 89.1
Solyc04g054140.4 Solanum lycopersicum HOM05D004874 ORTHO05D006796 3.3e-16 89.0 46 87.0
Sopen04g023580 Solanum pennellii HOM05D004874 ORTHO05D006796 3.3e-16 89.0 46 87.0
Actinidia15577 Actinidia chinensis HOM05D004874 ORTHO05D006796 4.3e-16 88.6 46 89.1
Glyma.06G145900 Glycine max HOM05D004874 ORTHO05D006796 4.3e-16 88.6 46 89.1
Prupe.6G174100 Prunus persica HOM05D004874 ORTHO05D006796 4.3e-16 88.6 46 89.1
Manes.12G141800 Manihot esculenta HOM05D004874 ORTHO05D006796 5.6e-16 88.2 45 91.1
SGA_v2.0_scaffold2G01299 Striga asiatica HOM05D004874 ORTHO05D006796 5.6e-16 88.2 44 90.9
MD01G1017400 Malus domestica HOM05D004874 ORTHO05D006796 7.3e-16 87.8 46 87.0
MD15G1333600 Malus domestica HOM05D004874 ORTHO05D006796 7.3e-16 87.8 46 87.0
TWI74G1507 Tripterygium wilfordii HOM05D004874 ORTHO05D006796 7.3e-16 87.8 46 89.1
CANSAT01G0647 Cannabis sativa HOM05D004874 ORTHO05D006796 9.5e-16 87.4 46 87.0
FvH4_1g22150 Fragaria vesca HOM05D004874 ORTHO05D006796 9.5e-16 87.4 46 87.0
FAN19G0866 Fragaria x ananassa HOM05D004874 ORTHO05D006796 9.5e-16 87.4 46 87.0
FAN23G3027 Fragaria x ananassa HOM05D004874 ORTHO05D006796 9.5e-16 87.4 46 87.0
FAN26G2351 Fragaria x ananassa HOM05D004874 ORTHO05D006796 9.5e-16 87.4 46 87.0
FAN28G2703 Fragaria x ananassa HOM05D004874 ORTHO05D006796 9.5e-16 87.4 46 87.0
Glyma.04G220000 Glycine max HOM05D004874 ORTHO05D006796 9.5e-16 87.4 46 87.0
RcHm_v2.0_Chr2g0116231 Rosa chinensis HOM05D004874 ORTHO05D006796 9.5e-16 87.4 46 87.0
COL.COLO4_11028 Corchorus olitorius HOM05D004874 ORTHO05D006796 1.2e-15 87.0 46 87.0
Duzib147G0760 Durio zibethinus HOM05D004874 ORTHO05D006796 1.2e-15 87.0 46 87.0
TPR.G23744 Trifolium pratense HOM05D004874 ORTHO05D006796 1.2e-15 87.0 46 87.0
TAR376G0110 Trochodendron aralioides HOM05D004874 ORTHO05D006796 1.2e-15 87.0 46 84.8
CSS0002284 Camellia sinensis var. sinensis HOM05D004874 ORTHO05D006796 1.6e-15 86.7 46 87.0
Potri.005G083800 Populus trichocarpa HOM05D004874 ORTHO05D006796 1.6e-15 86.7 45 88.9
Cc07_g14920 Coffea canephora HOM05D004874 ORTHO05D006796 2.1e-15 86.3 46 82.6
Cc07_g16070 Coffea canephora HOM05D004874 ORTHO05D006796 2.1e-15 86.3 45 86.7
Migut.H02425 Erythranthe guttata HOM05D004874 ORTHO05D006796 2.1e-15 86.3 45 84.4
Gorai.011G111800 Gossypium raimondii HOM05D004874 ORTHO05D006796 2.1e-15 86.3 46 84.8
Rhsim10G0151300 Rhododendron simsii HOM05D004874 ORTHO05D006796 2.8e-15 85.9 46 87.0
Gohir.A10G086600 Gossypium hirsutum HOM05D004874 ORTHO05D006796 3.6e-15 85.5 46 84.8
Lj1g0000337 Lotus japonicus HOM05D004874 ORTHO05D006796 3.6e-15 85.5 46 84.8
GSVIVG01022217001 Vitis vinifera HOM05D004874 ORTHO05D006796 3.6e-15 85.5 46 87.0
ClCG01G016180 Citrullus lanatus HOM05D004874 ORTHO05D006796 4.7e-15 85.1 46 82.6
MELO3C007488.2 Cucumis melo HOM05D004874 ORTHO05D006796 4.7e-15 85.1 46 82.6
CsaV3_6G042450 Cucumis sativus L. HOM05D004874 ORTHO05D006796 4.7e-15 85.1 46 82.6
PSO675G8458 Papaver somniferum HOM05D004874 ORTHO05D006796 6.2e-15 84.7 46 80.4
Psat5g065960 Pisum sativum HOM05D004874 ORTHO05D006796 6.2e-15 84.7 46 82.6
Atru.chr4.387 Acer truncatum HOM05D004874 ORTHO05D006796 8.1e-15 84.3 46 84.8
arahy.Tifrunner.gnm1.ann1.M2IALY Arachis hypogaea HOM05D004874 ORTHO05D006796 8.1e-15 84.3 46 82.6
arahy.Tifrunner.gnm1.ann1.ZQBN5H Arachis hypogaea HOM05D004874 ORTHO05D006796 8.1e-15 84.3 46 82.6
Thecc.01G111200 Theobroma cacao HOM05D004874 ORTHO05D006796 8.1e-15 84.3 46 82.6
Gohir.D10G102100 Gossypium hirsutum HOM05D004874 ORTHO05D006796 1.1e-14 84.0 46 82.6
Lj2A562T49 Lonicera japonica HOM05D004874 ORTHO05D006796 1.1e-14 84.0 46 82.6
Hund19660 Selenicereus undatus HOM05D004874 ORTHO05D006796 1.1e-14 84.0 46 80.4
Sabra05G0068900 Salix brachista HOM05D004874 ORTHO05D006796 1.4e-14 83.6 45 86.7
EL10Ac6g14746 Beta vulgaris HOM05D004874 ORTHO05D006796 1.8e-14 83.2 46 82.6
Manes.13G077640 Manihot esculenta HOM05D004874 ORTHO05D006796 1.8e-14 83.2 45 84.4
TAR628G0415 Trochodendron aralioides HOM05D004874 ORTHO05D006796 1.8e-14 83.2 46 80.4
Sed0015455 Sechium edule HOM05D004874 ORTHO05D006796 2.3e-14 82.8 45 82.2
Ah.02g124390 Amaranthus hybridus HOM05D004874 ORTHO05D006796 3.1e-14 82.4 46 80.4
Ca_16889_v3 Cicer arietinum L. HOM05D004874 ORTHO05D006796 3.1e-14 82.4 46 80.4
MBI02_g44126_MAGBIO Magnolia biondii HOM05D004874 ORTHO05D006796 3.1e-14 82.4 46 76.1
Medtr3g094770 Medicago truncatula HOM05D004874 ORTHO05D006796 3.1e-14 82.4 46 84.8
Lalb_Chr11g0068041 Lupinus albus HOM05D004874 ORTHO05D006796 4.0e-14 82.0 46 80.4
Potri.007G081900 Populus trichocarpa HOM05D004874 ORTHO05D006796 4.0e-14 82.0 45 84.4
PSO541G0735 Papaver somniferum HOM05D004874 ORTHO05D006796 5.2e-14 81.6 46 76.1
Ciclev10024728m.g Citrus clementina HOM05D004874 ORTHO05D006796 6.8e-14 81.3 46 78.3
AUR62003312 Chenopodium quinoa HOM05D004874 ORTHO05D006796 1.2e-13 80.5 46 78.3
AUR62016271 Chenopodium quinoa HOM05D004874 ORTHO05D006796 1.2e-13 80.5 46 78.3
Haze_25029 Corylus avellana HOM05D004874 ORTHO05D006796 1.2e-13 80.5 45 80.0
DCAR_014257 Daucus carota HOM05D004874 ORTHO05D006796 1.5e-13 80.1 46 80.4
CARHR113090 Cardamine hirsuta HOM05D004874 ORTHO05D006796 2.6e-13 79.3 46 78.3
Nn5g28922 Nelumbo nucifera HOM05D004874 ORTHO05D006796 2.6e-13 79.3 46 76.1
Thhalv10000015m.g Eutrema salsugineum HOM05D004874 ORTHO05D006796 3.4e-13 79.0 46 78.3
HPP92_016848 Vanilla planifolia HOM05D004874 ORTHO05D006796 3.4e-13 79.0 46 73.9
ECA238G3208 Erigeron canadensis HOM05D004874 ORTHO05D006796 4.4e-13 78.6 46 73.9
BcaB08g35028 Brassica carinata HOM05D004874 ORTHO05D006796 5.8e-13 78.2 46 76.1
A09p57840 Brassica napus HOM05D004874 ORTHO05D006796 5.8e-13 78.2 46 76.1
C08p41080 Brassica napus HOM05D004874 ORTHO05D006796 5.8e-13 78.2 46 76.1
BolC8t51674H Brassica oleracea HOM05D004874 ORTHO05D006796 5.8e-13 78.2 46 76.1
BraA09t41177Z Brassica rapa HOM05D004874 ORTHO05D006796 5.8e-13 78.2 46 76.1
HanXRQChr14g0446191 Helianthus annuus HOM05D004874 ORTHO05D006796 5.8e-13 78.2 46 76.1
Lsat_1_v5_gn_2_65401 Lactuca sativa HOM05D004874 ORTHO05D006796 5.8e-13 78.2 46 76.1
PGR102G1404 Punica granatum HOM05D004874 ORTHO05D006796 5.8e-13 78.2 46 80.4
QL06p032401 Quercus lobata HOM05D004874 ORTHO05D006796 5.8e-13 78.2 46 73.9
unitig_899.g14600 Utricularia gibba HOM05D004874 ORTHO05D006796 5.8e-13 78.2 48 72.9
AL4G11330 Arabidopsis lyrata HOM05D004874 ORTHO05D006796 7.5e-13 77.8 46 76.1
AT2G22010 Arabidopsis thaliana HOM05D004874 ORTHO05D006796 7.5e-13 77.8 46 76.1
Eucgr.H04838 Eucalyptus grandis HOM05D004874 ORTHO05D006796 9.9e-13 77.4 46 76.1
HanXRQChr10g0295251 Helianthus annuus HOM05D004874 ORTHO05D006796 9.9e-13 77.4 46 73.9
BcaC07g41106 Brassica carinata HOM05D004874 ORTHO05D006796 1.3e-12 77.0 46 73.9
CiPaw.04G092800 Carya illinoinensis HOM05D004874 ORTHO05D006796 1.3e-12 77.0 46 73.9
Sp4g01070 Schrenkiella parvula HOM05D004874 ORTHO05D006796 1.7e-12 76.6 46 76.1
THA.LOC104804146 Tarenaya hassleriana HOM05D004874 ORTHO05D006796 1.7e-12 76.6 46 78.3
ATR0564G436 Amborella trichopoda HOM05D004874 ORTHO05D006796 2.9e-12 75.9 46 73.9
Aqoxy6G00493 Aquilegia oxysepala HOM05D004874 ORTHO05D006796 2.9e-12 75.9 46 73.9
Carub.0004s0115 Capsella rubella HOM05D004874 ORTHO05D006796 2.9e-12 75.9 46 76.1
Zm00001eb328050 Zea mays HOM05D004874 ORTHO05D006796 2.9e-12 75.9 46 71.7
Lalb_Chr13g0296191 Lupinus albus HOM05D004874 ORTHO05D006796 3.2e-11 72.4 46 69.6
CDE04G1796 Ceratophyllum demersum HOM05D004874 ORTHO05D006796 5.4e-11 71.6 46 71.7
SEGI_33214 Sequoiadendron giganteum HOM05D004874 ORTHO05D006796 5.4e-11 71.6 46 69.6
AagrBONN_evm.TU.Sc2ySwM_228.911 Anthoceros agrestis HOM05D004874 ORTHO05D006796 3.0e-09 65.9 72 50.0
Pp3c1_33900 Physcomitrium patens HOM05D004874 ORTHO05D006796 3.0e-09 65.9 46 65.2
MCO16G187 Micromonas commoda HOM05D004874 ORTHO05D006796 3.9e-09 65.5 46 63.0
CBR_g4334 Chara braunii HOM05D004874 ORTHO05D006796 6.6e-09 64.7 46 60.9
SMO143G0116 Selaginella moellendorffii HOM05D004874 ORTHO05D006796 6.6e-09 64.7 46 65.2
Mapoly0047s0138 Marchantia polymorpha HOM05D004874 ORTHO05D006796 8.6e-09 64.3 46 65.2
Aa31LG7G14640 Aethionema arabicum HOM05D004874 ORTHO05D006796 5.6e-08 61.6 39 71.8
Pp3c17_14550 Physcomitrium patens HOM05D004874 ORTHO05D006796 5.6e-08 61.6 46 60.9
Pp3c2_2760 Physcomitrium patens HOM05D004874 ORTHO05D006796 9.5e-08 60.8 46 58.7
Cpa.g.sc196.6 Carica papaya HOM05D004874 ORTHO05D006796 1.2e-07 60.5 29 89.7


User provided reference genes

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