Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000787g0210 Nicotiana tabacum HOM05D007027 ORTHO05D008765 9.2e-223 776.5 388 100.0
Nitab4.5_0004106g0030 Nicotiana tabacum HOM05D007027 ORTHO05D008765 1.9e-215 752.3 388 96.1
PGSC0003DMG400024892 Solanum tuberosum HOM05D007027 ORTHO05D008765 6.5e-192 674.1 387 86.8
Solyc01g103560.3 Solanum lycopersicum HOM05D007027 ORTHO05D008765 2.1e-190 669.1 386 85.8
Sopen01g045910 Solanum pennellii HOM05D007027 ORTHO05D008765 1.5e-188 662.9 386 85.8
CAN.G855.3 Capsicum annuum HOM05D007027 ORTHO05D008765 2.2e-187 659.1 387 84.2
CSS0028981 Camellia sinensis var. sinensis HOM05D007027 ORTHO05D008765 2.9e-152 542.3 385 70.9
Dinv07482 Davidia involucrata HOM05D007027 ORTHO05D008765 1.0e-149 533.9 385 71.2
GSVIVG01023249001 Vitis vinifera HOM05D007027 ORTHO05D008765 1.2e-148 530.4 379 70.4
CiPaw.05G004800 Carya illinoinensis HOM05D007027 ORTHO05D008765 3.4e-148 528.9 376 72.9
Oeu064602.3 Olea europaea HOM05D007027 ORTHO05D008765 8.3e-147 524.2 426 65.7
Cfa004487 Carpinus fangiana HOM05D007027 ORTHO05D008765 1.1e-146 523.9 377 70.6
Cc02_g23170 Coffea canephora HOM05D007027 ORTHO05D008765 1.2e-145 520.4 377 72.7
RcHm_v2.0_Chr5g0060601 Rosa chinensis HOM05D007027 ORTHO05D008765 4.5e-145 518.5 375 70.4
CiPaw.06G173600 Carya illinoinensis HOM05D007027 ORTHO05D008765 1.7e-144 516.5 377 69.8
FvH4_3g33250 Fragaria vesca HOM05D007027 ORTHO05D008765 2.9e-144 515.8 375 70.1
QL02p100436 Quercus lobata HOM05D007027 ORTHO05D008765 6.6e-144 514.6 376 70.2
THA.LOC104816809 Tarenaya hassleriana HOM05D007027 ORTHO05D008765 6.6e-144 514.6 379 68.9
SGA_v2.0_scaffold304G47919 Striga asiatica HOM05D007027 ORTHO05D008765 2.5e-143 512.7 394 67.0
FAN25G1584 Fragaria x ananassa HOM05D007027 ORTHO05D008765 9.5e-143 510.8 375 69.1
FAN16G3401 Fragaria x ananassa HOM05D007027 ORTHO05D008765 1.6e-142 510.0 377 69.0
Manes.07G024000 Manihot esculenta HOM05D007027 ORTHO05D008765 2.1e-142 509.6 388 68.8
MD15G1435400 Malus domestica HOM05D007027 ORTHO05D008765 2.8e-142 509.2 382 70.7
MD08G1241400 Malus domestica HOM05D007027 ORTHO05D008765 1.0e-141 507.3 379 69.4
Cpa.g.sc113.45 Carica papaya HOM05D007027 ORTHO05D008765 5.2e-141 505.0 375 68.8
Lj5C266T4 Lonicera japonica HOM05D007027 ORTHO05D008765 1.5e-140 503.4 385 68.8
Gohir.D01G174800 Gossypium hirsutum HOM05D007027 ORTHO05D008765 2.6e-140 502.7 342 72.8
Duzib132G0056 Durio zibethinus HOM05D007027 ORTHO05D008765 7.5e-140 501.1 375 68.5
PGR142G1179 Punica granatum HOM05D007027 ORTHO05D008765 1.7e-139 500.0 374 69.8
Gorai.002G216900 Gossypium raimondii HOM05D007027 ORTHO05D008765 3.7e-139 498.8 342 72.5
FAN11G0675 Fragaria x ananassa HOM05D007027 ORTHO05D008765 1.1e-138 497.3 411 64.0
Gohir.A01G183800 Gossypium hirsutum HOM05D007027 ORTHO05D008765 1.4e-138 496.9 360 70.3
TAR381G1092 Trochodendron aralioides HOM05D007027 ORTHO05D008765 2.4e-138 496.1 373 69.2
SalBow7G1849 Salvia bowleyana HOM05D007027 ORTHO05D008765 4.1e-138 495.4 369 68.3
CsaV3_5G029790 Cucumis sativus L. HOM05D007027 ORTHO05D008765 1.6e-137 493.4 378 67.2
Migut.B00775 Erythranthe guttata HOM05D007027 ORTHO05D008765 2.7e-137 492.7 369 68.8
HanXRQChr09g0249131 Helianthus annuus HOM05D007027 ORTHO05D008765 5.9e-137 491.5 388 67.3
Rhsim11G0122600 Rhododendron simsii HOM05D007027 ORTHO05D008765 7.8e-137 491.1 410 64.9
Nn5g27423 Nelumbo nucifera HOM05D007027 ORTHO05D008765 1.7e-136 490.0 369 68.0
MELO3C011820.2 Cucumis melo HOM05D007027 ORTHO05D008765 5.0e-136 488.4 395 64.6
VMungo0540G1081 Vigna mungo HOM05D007027 ORTHO05D008765 5.6e-135 485.0 376 67.0
CANSAT54G3047 Cannabis sativa HOM05D007027 ORTHO05D008765 7.3e-135 484.6 381 65.6
DCAR_006671 Daucus carota HOM05D007027 ORTHO05D008765 7.3e-135 484.6 384 64.1
Atru.chr6.497 Acer truncatum HOM05D007027 ORTHO05D008765 1.6e-134 483.4 375 66.4
Ca_00043_v3 Cicer arietinum L. HOM05D007027 ORTHO05D008765 8.0e-134 481.1 362 68.8
Glyma.12G167000 Glycine max HOM05D007027 ORTHO05D008765 1.4e-133 480.3 372 66.9
Hund15459 Selenicereus undatus HOM05D007027 ORTHO05D008765 3.1e-133 479.2 370 66.5
Actinidia00176 Actinidia chinensis HOM05D007027 ORTHO05D008765 1.5e-132 476.9 362 68.5
Glyma.16G003100 Glycine max HOM05D007027 ORTHO05D008765 7.5e-132 474.6 379 66.0
CARHR009790 Cardamine hirsuta HOM05D007027 ORTHO05D008765 9.8e-132 474.2 382 66.0
Potri.003G008500 Populus trichocarpa HOM05D007027 ORTHO05D008765 1.7e-131 473.4 363 68.6
AT1G09800 Arabidopsis thaliana HOM05D007027 ORTHO05D008765 2.2e-131 473.0 379 65.2
MBI03_g18680_MAGBIO Magnolia biondii HOM05D007027 ORTHO05D008765 2.9e-131 472.6 358 67.9
BcaC05g24848 Brassica carinata HOM05D007027 ORTHO05D008765 6.4e-131 471.5 374 66.0
Thhalv10007981m.g Eutrema salsugineum HOM05D007027 ORTHO05D008765 8.3e-131 471.1 376 64.9
Haze_10044 Corylus avellana HOM05D007027 ORTHO05D008765 1.1e-130 470.7 484 55.0
Prupe.1G579000 Prunus persica HOM05D007027 ORTHO05D008765 1.9e-130 469.9 377 67.4
Psat1g222360 Pisum sativum HOM05D007027 ORTHO05D008765 4.1e-130 468.8 370 66.8
FAN21G1550 Fragaria x ananassa HOM05D007027 ORTHO05D008765 2.7e-129 466.1 375 65.6
C08p49260 Brassica napus HOM05D007027 ORTHO05D008765 6.0e-129 464.9 325 70.8
EL10Ac6g14111 Beta vulgaris HOM05D007027 ORTHO05D008765 7.8e-129 464.5 370 65.7
BolC8t52461H Brassica oleracea HOM05D007027 ORTHO05D008765 7.8e-129 464.5 325 70.8
Aqoxy3G00475 Aquilegia oxysepala HOM05D007027 ORTHO05D008765 3.9e-128 462.2 328 70.7
Sp1g08410 Schrenkiella parvula HOM05D007027 ORTHO05D008765 3.9e-128 462.2 382 64.4
TPR.G2122 Trifolium pratense HOM05D007027 ORTHO05D008765 6.6e-128 461.5 373 65.1
ATR1136G089 Amborella trichopoda HOM05D007027 ORTHO05D008765 1.5e-127 460.3 360 65.6
A09p65310 Brassica napus HOM05D007027 ORTHO05D008765 1.5e-127 460.3 326 70.9
ECA233G3768 Erigeron canadensis HOM05D007027 ORTHO05D008765 4.3e-127 458.8 323 71.8
Carub.0001s0916 Capsella rubella HOM05D007027 ORTHO05D008765 7.3e-127 458.0 384 64.3
TWI23G0132 Tripterygium wilfordii HOM05D007027 ORTHO05D008765 1.6e-126 456.8 384 63.0
AL1G20380 Arabidopsis lyrata HOM05D007027 ORTHO05D008765 2.1e-126 456.4 417 59.5
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 6.2e-126 454.9 363 65.3
unitig_699.g19848 Utricularia gibba HOM05D007027 ORTHO05D008765 6.2e-126 454.9 385 63.4
Sabra03G0004200 Salix brachista HOM05D007027 ORTHO05D008765 1.1e-125 454.1 389 62.5
Os12g0194800 Oryza sativa ssp. japonica HOM05D007027 ORTHO05D008765 6.8e-125 451.4 331 69.5
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 1.2e-124 450.7 361 65.1
arahy.Tifrunner.gnm1.ann1.BAUB6M Arachis hypogaea HOM05D007027 ORTHO05D008765 1.5e-124 450.3 373 63.3
Medtr2g005830 Medicago truncatula HOM05D007027 ORTHO05D008765 1.5e-124 450.3 373 61.7
arahy.Tifrunner.gnm1.ann1.3G44QY Arachis hypogaea HOM05D007027 ORTHO05D008765 2.0e-124 449.9 373 63.5
vmacro01711 Vaccinium macrocarpon HOM05D007027 ORTHO05D008765 3.4e-124 449.1 436 59.4
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 9.8e-124 447.6 362 63.5
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 6.4e-123 444.9 362 63.3
Ciclev10001491m.g Citrus clementina HOM05D007027 ORTHO05D008765 1.1e-122 444.1 342 67.8
Lalb_Chr20g0123691 Lupinus albus HOM05D007027 ORTHO05D008765 4.1e-122 442.2 325 69.2
COL.COLO4_17723 Corchorus olitorius HOM05D007027 ORTHO05D008765 2.1e-121 439.9 332 68.7
Thecc.02G018500 Theobroma cacao HOM05D007027 ORTHO05D008765 4.6e-121 438.7 379 63.6
Lj6g0019688 Lotus japonicus HOM05D007027 ORTHO05D008765 4.7e-118 428.7 373 60.9
Lj6g0023928 Lotus japonicus HOM05D007027 ORTHO05D008765 4.7e-118 428.7 373 60.9
Zm00001eb138750 Zea mays HOM05D007027 ORTHO05D008765 6.2e-118 428.3 328 67.7
PSO170G1275 Papaver somniferum HOM05D007027 ORTHO05D008765 1.8e-117 426.8 332 64.8
PSO017G0894 Papaver somniferum HOM05D007027 ORTHO05D008765 6.8e-117 424.9 329 64.1
BcaC07g41859 Brassica carinata HOM05D007027 ORTHO05D008765 5.8e-116 421.8 365 61.6
AUR62043952 Chenopodium quinoa HOM05D007027 ORTHO05D008765 2.8e-110 402.9 324 64.8
Eucgr.I02764 Eucalyptus grandis HOM05D007027 ORTHO05D008765 3.1e-109 399.4 332 62.7
Sed0027668 Sechium edule HOM05D007027 ORTHO05D008765 3.3e-103 379.4 325 60.6
Pp3c1_13020 Physcomitrium patens HOM05D007027 ORTHO05D008765 5.6e-103 378.6 322 60.6
ClCG11G013270 Citrullus lanatus HOM05D007027 ORTHO05D008765 2.2e-99 366.7 378 55.3
Mapoly0016s0042 Marchantia polymorpha HOM05D007027 ORTHO05D008765 2.1e-94 350.1 358 52.5
Phvul.006G218900 Phaseolus vulgaris HOM05D007027 ORTHO05D008765 5.8e-92 342.0 253 66.0
SMO118G0354 Selaginella moellendorffii HOM05D007027 ORTHO05D008765 4.9e-91 339.0 323 54.8
Sc07g0005100 Simmondsia chinensis HOM05D007027 ORTHO05D008765 1.0e-88 331.3 276 63.8
HPP92_013442 Vanilla planifolia HOM05D007027 ORTHO05D008765 4.8e-86 322.4 306 56.9
Peaxi162Scf00011g01224 Petunia axillaris HOM05D007027 ORTHO05D008765 8.7e-80 301.6 412 48.8
CBR_g30061 Chara braunii HOM05D007027 ORTHO05D008765 4.0e-77 292.7 457 40.9
Aa31LG1G5150 Aethionema arabicum HOM05D007027 ORTHO05D008765 2.6e-76 290.0 220 66.4
HPP92_013441 Vanilla planifolia HOM05D007027 ORTHO05D008765 2.5e-74 283.5 186 72.6
CDE05G2927 Ceratophyllum demersum HOM05D007027 ORTHO05D008765 2.3e-64 250.4 167 72.5
AUR62028254 Chenopodium quinoa HOM05D007027 ORTHO05D008765 3.3e-63 246.5 197 64.0
Lsat_1_v5_gn_9_120240 Lactuca sativa HOM05D007027 ORTHO05D008765 6.3e-62 242.3 185 70.3
MCO02G420 Micromonas commoda HOM05D007027 ORTHO05D008765 3.7e-54 216.5 383 38.4
Migut.B00774 Erythranthe guttata HOM05D007027 ORTHO05D008765 2.0e-47 194.1 157 63.7
RcHm_v2.0_Chr3g0481081 Rosa chinensis HOM05D007027 ORTHO05D008765 5.5e-34 149.4 79 86.1
CDE05G0566 Ceratophyllum demersum HOM05D007027 ORTHO05D008765 8.0e-33 145.6 136 56.6
SMO361G0559 Selaginella moellendorffii HOM05D006708 ORTHO05D008321 9.2e-21 105.5 333 26.1
Pp3c21_5420 Physcomitrium patens HOM05D006708 ORTHO05D008321 1.6e-20 104.8 332 28.3
Mapoly0209s0002 Marchantia polymorpha HOM05D006708 ORTHO05D008321 3.9e-19 100.1 334 25.7
AagrBONN_evm.TU.Sc2ySwM_228.1603 Anthoceros agrestis HOM05D006708 ORTHO05D008321 3.1e-16 90.5 327 27.2
HanXRQChr10g0293331 Helianthus annuus HOM05D006708 ORTHO05D008321 1.2e-15 88.6 219 30.6
Cre09.g405150 Chlamydomonas reinhardtii HOM05D006708 ORTHO05D008321 2.6e-15 87.4 377 27.3
SalBow2G2621 Salvia bowleyana HOM05D006708 ORTHO05D008321 2.6e-15 87.4 195 30.3
Aa31LG5G17510 Aethionema arabicum HOM05D006708 ORTHO05D008321 3.4e-15 87.0 204 29.4
Lj4g0015836 Lotus japonicus HOM05D006708 ORTHO05D008321 4.4e-15 86.7 208 29.8
Hund22645 Selenicereus undatus HOM05D006708 ORTHO05D008321 7.5e-15 85.9 211 28.4
TPR.G12542 Trifolium pratense HOM05D006708 ORTHO05D008321 7.5e-15 85.9 227 29.5
PGSC0003DMG400027203 Solanum tuberosum HOM05D006708 ORTHO05D008321 9.8e-15 85.5 195 31.8
CsaV3_6G000260 Cucumis sativus L. HOM05D006708 ORTHO05D008321 1.7e-14 84.7 198 31.3
RcHm_v2.0_Chr4g0427681 Rosa chinensis HOM05D006708 ORTHO05D008321 1.7e-14 84.7 200 28.0
CSS0037344 Camellia sinensis var. sinensis HOM05D006708 ORTHO05D008321 2.9e-14 84.0 206 26.7
AUR62002543 Chenopodium quinoa HOM05D006708 ORTHO05D008321 2.9e-14 84.0 208 29.3
Nitab4.5_0000745g0080 Nicotiana tabacum HOM05D006708 ORTHO05D008321 3.7e-14 83.6 195 30.8
FAN07G1828 Fragaria x ananassa HOM05D006708 ORTHO05D008321 4.9e-14 83.2 176 29.0
FAN12G1816 Fragaria x ananassa HOM05D006708 ORTHO05D008321 4.9e-14 83.2 176 29.0
Solyc05g053190.3 Solanum lycopersicum HOM05D006708 ORTHO05D008321 4.9e-14 83.2 195 30.8
VMungo1215G1693 Vigna mungo HOM05D006708 ORTHO05D008321 4.9e-14 83.2 212 27.4
CSS0031150 Camellia sinensis var. sinensis HOM05D006708 ORTHO05D008321 6.4e-14 82.8 206 26.7
FAN17G2628 Fragaria x ananassa HOM05D006708 ORTHO05D008321 6.4e-14 82.8 176 29.0
Ca_21374_v3 Cicer arietinum L. HOM05D006708 ORTHO05D008321 8.3e-14 82.4 205 29.3
Sopen05g031700 Solanum pennellii HOM05D006708 ORTHO05D008321 8.3e-14 82.4 195 31.3
CAN.G305.34 Capsicum annuum HOM05D006708 ORTHO05D008321 1.4e-13 81.6 197 31.5
FvH4_4g21570 Fragaria vesca HOM05D006708 ORTHO05D008321 1.4e-13 81.6 176 29.0
Medtr4g123970 Medicago truncatula HOM05D006708 ORTHO05D008321 1.4e-13 81.6 208 27.9
Lalb_Chr18g0047341 Lupinus albus HOM05D006708 ORTHO05D008321 1.9e-13 81.3 204 29.9
Psat4g021160 Pisum sativum HOM05D006708 ORTHO05D008321 3.2e-13 80.5 208 26.4
Lj6A702T41 Lonicera japonica HOM05D006708 ORTHO05D008321 7.0e-13 79.3 198 29.3
arahy.Tifrunner.gnm1.ann1.YU479Z Arachis hypogaea HOM05D006708 ORTHO05D008321 9.2e-13 79.0 206 28.2
CANSAT64G0974 Cannabis sativa HOM05D006708 ORTHO05D008321 9.2e-13 79.0 204 28.4
Peaxi162Scf00164g00315 Petunia axillaris HOM05D006708 ORTHO05D008321 1.6e-12 78.2 199 27.6
arahy.Tifrunner.gnm1.ann1.H7T0W5 Arachis hypogaea HOM05D006708 ORTHO05D008321 2.0e-12 77.8 196 28.6
Cre13.g591501 Chlamydomonas reinhardtii HOM05D006708 ORTHO05D008321 2.7e-12 77.4 338 26.3
Glyma.17G041000 Glycine max HOM05D006708 ORTHO05D008321 2.7e-12 77.4 335 23.9
Phvul.003G122200 Phaseolus vulgaris HOM05D006708 ORTHO05D008321 2.7e-12 77.4 176 29.0
Zm00001eb245280 Zea mays HOM05D006708 ORTHO05D008321 3.5e-12 77.0 336 24.7
Nn3g21927 Nelumbo nucifera HOM05D006708 ORTHO05D008321 4.6e-12 76.6 229 27.5
Potri.008G206200 Populus trichocarpa HOM05D006708 ORTHO05D008321 4.6e-12 76.6 198 27.8
CBR_g55386 Chara braunii HOM05D006708 ORTHO05D008321 3.0e-11 73.9 202 31.2
SEGI_30443 Sequoiadendron giganteum HOM05D007027 ORTHO05D008765 3.9e-11 73.6 51 72.5
ClCG06G004170 Citrullus lanatus HOM05D006708 ORTHO05D008321 2.5e-10 70.9 178 29.2
Zm00001eb018490 Zea mays HOM05D005655 ORTHO05D007386 1.2e-09 68.6 326 25.2
AL7G44200 Arabidopsis lyrata HOM05D006401 ORTHO05D007864 2.1e-09 67.8 390 25.1
Carub.0007s3123 Capsella rubella HOM05D006401 ORTHO05D007864 4.7e-09 66.6 383 24.3
Nitab4.5_0001769g0170 Nicotiana tabacum HOM05D006708 ORTHO05D008321 4.7e-09 66.6 177 28.8
AT5G35400 Arabidopsis thaliana HOM05D006401 ORTHO05D007864 4.0e-08 63.5 382 25.4
DCAR_023411 Daucus carota HOM05D006708 ORTHO05D008321 4.0e-08 63.5 223 23.8
Phvul.007G085300 Phaseolus vulgaris HOM05D005655 ORTHO05D007386 2.0e-07 61.2 264 26.9
Sed0006346 Sechium edule HOM05D006708 ORTHO05D008321 2.6e-07 60.8 280 23.2
MELO3C021228.2 Cucumis melo HOM05D006708 ORTHO05D008321 2.2e-06 57.8 96 32.3
SEGI_32206 Sequoiadendron giganteum HOM05D006708 ORTHO05D008321 2.2e-06 57.8 72 37.5
SGA_v2.0_scaffold318G48475 Striga asiatica HOM05D006401 ORTHO05D007864 6.4e-06 56.2 352 23.3


User provided reference genes

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