Gene: Sopen01g045910

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g045910
  • Transcript Identifier Sopen01g045910.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 102672382-102677345 : positive

Gene Family Information

  • ID HOM05D007027
  • #Genes/#Species 114/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g045910.1

Descriptions

  • Description Pseudouridine synthase family protein | FUNCTIONS IN: pseudouridine synthase activity | INVOLVED IN: pseudouridine synthesis, RNA modification | LOCATED IN: cellular_component unknown | EXPRESSED IN: 14 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain , Pseudouridine synthase I, TruA, N-terminal , Pseudouridine synthase I, TruA, alpha/beta domain , Pseudouridine synthase I, TruA, C-terminal , Pseudouridine synthase I, TruA | BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001522
IEA
InterPropseudouridine synthesis
GO:0009451
IEA
InterProRNA modification

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0009982
IEA
InterPropseudouridine synthase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020103 Pseudouridine synthase, catalytic domain superfamily
IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain
IPR001406 Pseudouridine synthase I, TruA
IPR020094 Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal
IPR020095 Pseudouridine synthase I, TruA, C-terminal
Mapman id Description
16.5.3.1 RNA processing.RNA modification.pseudouridylation.tRNA pseudouridine synthase (TruA)