Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000611g0070 Nicotiana tabacum HOM05D005238 ORTHO05D006337 3.7e-51 205.3 103 100.0
Nitab4.5_0008429g0030 Nicotiana tabacum HOM05D005238 ORTHO05D006337 1.5e-44 183.3 92 98.9
PGSC0003DMG400011240 Solanum tuberosum HOM05D005238 ORTHO05D006337 8.5e-40 167.5 102 85.3
Solyc10g005590.4 Solanum lycopersicum HOM05D005238 ORTHO05D006337 7.2e-39 164.5 102 84.3
Sopen10g001560 Solanum pennellii HOM05D005238 ORTHO05D006337 7.2e-39 164.5 102 84.3
MSTRG.7059 Avicennia marina HOM05D005238 ORTHO05D006337 2.3e-37 159.5 98 79.6
Oeu052006.1 Olea europaea HOM05D005238 ORTHO05D006337 2.3e-37 159.5 99 79.8
Migut.M01557 Erythranthe guttata HOM05D005238 ORTHO05D006337 2.8e-35 152.5 101 77.2
Cc05_g16060 Coffea canephora HOM05D005238 ORTHO05D006337 5.3e-34 148.3 97 73.2
Oeu003828.2 Olea europaea HOM05D005238 ORTHO05D006337 1.5e-33 146.7 99 76.8
Cpa.g.sc10.47 Carica papaya HOM05D005238 ORTHO05D006337 4.5e-33 145.2 99 70.7
Peaxi162Scf00018g00105 Petunia axillaris HOM05D005238 ORTHO05D006337 1.7e-32 143.3 72 94.4
PSO782G5275 Papaver somniferum HOM05D005238 ORTHO05D006337 3.8e-32 142.1 99 69.7
Dinv42511 Davidia involucrata HOM05D005238 ORTHO05D006337 8.5e-32 141.0 100 68.0
SalBow8G4928 Salvia bowleyana HOM05D005238 ORTHO05D006337 2.5e-31 139.4 99 71.7
CANSAT80G2747 Cannabis sativa HOM05D005238 ORTHO05D006337 3.2e-31 139.0 98 68.4
TAR627G0595 Trochodendron aralioides HOM05D005238 ORTHO05D006337 3.2e-31 139.0 99 65.7
QL04p073782 Quercus lobata HOM05D005238 ORTHO05D006337 5.5e-31 138.3 98 65.3
PSO170G6647 Papaver somniferum HOM05D005238 ORTHO05D006337 1.2e-30 137.1 99 67.7
MBI16_g40051_MAGBIO Magnolia biondii HOM05D005238 ORTHO05D006337 1.6e-30 136.7 98 66.3
Aa31LG7G1130 Aethionema arabicum HOM05D005238 ORTHO05D006337 2.1e-30 136.3 97 69.1
HanXRQChr03g0071621 Helianthus annuus HOM05D005238 ORTHO05D006337 2.7e-30 136.0 81 76.5
Actinidia07350 Actinidia chinensis HOM05D005238 ORTHO05D006337 7.9e-30 134.4 99 68.7
Phvul.005G056900 Phaseolus vulgaris HOM05D005238 ORTHO05D006337 7.9e-30 134.4 94 70.2
Prupe.4G139800 Prunus persica HOM05D005238 ORTHO05D006337 7.9e-30 134.4 98 67.3
Manes.06G171800 Manihot esculenta HOM05D005238 ORTHO05D006337 1.0e-29 134.0 100 68.0
SGA_v2.0_scaffold186G40218 Striga asiatica HOM05D005238 ORTHO05D006337 1.0e-29 134.0 99 69.7
Thhalv10007778m.g Eutrema salsugineum HOM05D005238 ORTHO05D006337 1.8e-29 133.3 99 69.7
Dinv19619 Davidia involucrata HOM05D005238 ORTHO05D006337 3.9e-29 132.1 99 65.7
Gohir.A13G153000 Gossypium hirsutum HOM05D005238 ORTHO05D006337 3.9e-29 132.1 99 64.6
MD10G1202400 Malus domestica HOM05D005238 ORTHO05D006337 5.1e-29 131.7 103 66.0
Aa31LG4G1900 Aethionema arabicum HOM05D005238 ORTHO05D006337 6.7e-29 131.3 99 69.7
Nn6g31521 Nelumbo nucifera HOM05D005238 ORTHO05D006337 8.8e-29 131.0 99 63.6
PGR031G1019 Punica granatum HOM05D005238 ORTHO05D006337 8.8e-29 131.0 99 67.7
vmacro11663 Vaccinium macrocarpon HOM05D005238 ORTHO05D006337 1.5e-28 130.2 99 65.7
Cfa002698 Carpinus fangiana HOM05D005238 ORTHO05D006337 2.0e-28 129.8 98 67.3
Lalb_Chr25g0284971 Lupinus albus HOM05D005238 ORTHO05D006337 3.3e-28 129.0 99 63.6
Potri.011G143100 Populus trichocarpa HOM05D005238 ORTHO05D006337 3.3e-28 129.0 99 64.6
BcaC07g38806 Brassica carinata HOM05D005238 ORTHO05D006337 7.4e-28 127.9 99 66.7
Hma1.2p1_0637F.1_g193540 Hydrangea macrophylla HOM05D005238 ORTHO05D006337 1.3e-27 127.1 101 63.4
ClCG11G016430 Citrullus lanatus HOM05D005238 ORTHO05D006337 2.2e-27 126.3 99 61.6
CiPaw.12G006900 Carya illinoinensis HOM05D005238 ORTHO05D006337 3.7e-27 125.6 98 62.2
unitig_748.g7636 Utricularia gibba HOM05D005238 ORTHO05D006337 3.7e-27 125.6 98 67.3
AL1G28770 Arabidopsis lyrata HOM05D005238 ORTHO05D006337 4.8e-27 125.2 100 67.0
Gohir.D01G026800 Gossypium hirsutum HOM05D005238 ORTHO05D006337 4.8e-27 125.2 99 62.6
Gorai.002G036200 Gossypium raimondii HOM05D005238 ORTHO05D006337 4.8e-27 125.2 99 62.6
CSS0024118 Camellia sinensis var. sinensis HOM05D005238 ORTHO05D006337 6.3e-27 124.8 99 65.7
SEGI_37868 Sequoiadendron giganteum HOM05D005238 ORTHO05D006337 6.3e-27 124.8 99 62.6
CsaV3_4G031880 Cucumis sativus L. HOM05D005238 ORTHO05D006337 8.2e-27 124.4 98 61.2
BcaC05g25524 Brassica carinata HOM05D005238 ORTHO05D006337 1.1e-26 124.0 99 68.7
C08p17490 Brassica napus HOM05D005238 ORTHO05D006337 1.1e-26 124.0 99 64.6
BolC5t30204H Brassica oleracea HOM05D005238 ORTHO05D006337 1.1e-26 124.0 99 68.7
BolC8t49374H Brassica oleracea HOM05D005238 ORTHO05D006337 1.1e-26 124.0 99 64.6
Gohir.A01G039100 Gossypium hirsutum HOM05D005238 ORTHO05D006337 1.1e-26 124.0 99 61.6
Aqoxy6G00105 Aquilegia oxysepala HOM05D005238 ORTHO05D006337 1.4e-26 123.6 96 64.6
TWI39G0564 Tripterygium wilfordii HOM05D005238 ORTHO05D006337 1.4e-26 123.6 99 64.6
Lalb_Chr20g0108761 Lupinus albus HOM05D005238 ORTHO05D006337 1.8e-26 123.2 99 63.6
Ciclev10020284m.g Citrus clementina HOM05D005238 ORTHO05D006337 2.4e-26 122.9 99 61.6
THA.LOC104813616 Tarenaya hassleriana HOM05D005238 ORTHO05D006337 2.4e-26 122.9 99 60.6
TPR.G9757 Trifolium pratense HOM05D005238 ORTHO05D006337 2.4e-26 122.9 104 64.4
Rhsim06G0238800 Rhododendron simsii HOM05D005238 ORTHO05D006337 3.1e-26 122.5 99 62.6
Sp1g14750 Schrenkiella parvula HOM05D005238 ORTHO05D006337 3.1e-26 122.5 99 64.6
Eucgr.F03179 Eucalyptus grandis HOM05D005238 ORTHO05D006337 4.1e-26 122.1 100 64.0
Glyma.08G172000 Glycine max HOM05D005238 ORTHO05D006337 5.3e-26 121.7 99 60.6
Glyma.15G255400 Glycine max HOM05D005238 ORTHO05D006337 9.1e-26 120.9 99 60.6
VMungo1080G1161 Vigna mungo HOM05D005238 ORTHO05D006337 9.1e-26 120.9 91 64.8
Pp3c8_3970 Physcomitrium patens HOM05D005238 ORTHO05D006337 1.2e-25 120.6 96 63.5
CBR_g46302 Chara braunii HOM05D005238 ORTHO05D006337 1.5e-25 120.2 101 61.4
Lj8A188G51 Lonicera japonica HOM05D005238 ORTHO05D006337 1.5e-25 120.2 73 75.3
EL10Ac2g03318 Beta vulgaris HOM05D005238 ORTHO05D006337 2.6e-25 119.4 75 70.7
DCAR_016821 Daucus carota HOM05D005238 ORTHO05D006337 3.4e-25 119.0 102 62.7
Thecc.07G152800 Theobroma cacao HOM05D005238 ORTHO05D006337 3.4e-25 119.0 99 60.6
Duzib213G1032 Durio zibethinus HOM05D005238 ORTHO05D006337 5.9e-25 118.2 102 60.8
GSVIVG01020424001 Vitis vinifera HOM05D005238 ORTHO05D006337 5.9e-25 118.2 99 62.6
A06p12590 Brassica napus HOM05D005238 ORTHO05D006337 1.3e-24 117.1 99 64.6
BcaB03g13039 Brassica carinata HOM05D000001 ORTHO05D000003 2.9e-24 115.9 98 62.2
C08p44400 Brassica napus HOM05D005238 ORTHO05D006337 3.8e-24 115.5 78 70.5
CDE01G0718 Ceratophyllum demersum HOM05D005238 ORTHO05D006337 3.8e-24 115.5 113 54.0
AUR62043127 Chenopodium quinoa HOM05D005238 ORTHO05D006337 5.0e-24 115.2 73 71.2
ECA240G2789 Erigeron canadensis HOM05D005238 ORTHO05D006337 5.0e-24 115.2 118 51.7
FAN25G0513 Fragaria x ananassa HOM05D006308 ORTHO05D007820 5.0e-24 115.2 100 61.0
A08p31340 Brassica napus HOM05D000001 ORTHO05D000003 6.5e-24 114.8 80 70.0
BraA08t35057Z Brassica rapa HOM05D000001 ORTHO05D000003 6.5e-24 114.8 80 70.0
A09p60810 Brassica napus HOM05D005238 ORTHO05D006337 1.1e-23 114.0 97 60.8
C05p14890 Brassica napus HOM05D005238 ORTHO05D006337 1.1e-23 114.0 73 72.6
BolC8t51981H Brassica oleracea HOM05D005238 ORTHO05D006337 1.1e-23 114.0 97 60.8
BraA09t41454Z Brassica rapa HOM05D005238 ORTHO05D006337 1.1e-23 114.0 97 60.8
DCAR_013738 Daucus carota HOM05D005238 ORTHO05D006337 1.1e-23 114.0 99 63.6
Mapoly0011s0143 Marchantia polymorpha HOM05D005238 ORTHO05D006337 1.1e-23 114.0 79 67.1
FvH4_3g15770 Fragaria vesca HOM05D005238 ORTHO05D006337 1.9e-23 113.2 73 71.2
BraA06t24421Z Brassica rapa HOM05D005238 ORTHO05D006337 2.5e-23 112.8 106 57.5
FAN21G1113 Fragaria x ananassa HOM05D005238 ORTHO05D006337 2.5e-23 112.8 100 59.0
Lsat_1_v5_gn_7_65541 Lactuca sativa HOM05D005238 ORTHO05D006337 2.5e-23 112.8 65 78.5
RcHm_v2.0_Chr5g0026571 Rosa chinensis HOM05D005238 ORTHO05D006337 2.5e-23 112.8 103 57.3
arahy.Tifrunner.gnm1.ann1.K2PXHZ Arachis hypogaea HOM05D005238 ORTHO05D006337 3.2e-23 112.5 99 56.6
TWI38G1616 Tripterygium wilfordii HOM05D005238 ORTHO05D006337 4.2e-23 112.1 99 61.6
Haze_24974 Corylus avellana HOM05D005238 ORTHO05D006337 5.5e-23 111.7 82 65.9
FAN11G0128 Fragaria x ananassa HOM05D006308 ORTHO05D007820 5.5e-23 111.7 103 57.3
arahy.Tifrunner.gnm1.ann1.7NR7Q4 Arachis hypogaea HOM05D005238 ORTHO05D006337 7.2e-23 111.3 99 56.6
AUR62039165 Chenopodium quinoa HOM05D005238 ORTHO05D006337 7.2e-23 111.3 120 51.7
Medtr2g069490 Medicago truncatula HOM05D005238 ORTHO05D006337 7.2e-23 111.3 103 58.3
Os05g0105900 Oryza sativa ssp. japonica HOM05D005238 ORTHO05D006337 7.2e-23 111.3 73 69.9
ATR1136G058 Amborella trichopoda HOM05D005238 ORTHO05D006337 1.2e-22 110.5 73 68.5
Carub.0001s1636 Capsella rubella HOM05D005238 ORTHO05D006337 1.6e-22 110.2 97 57.7
Gohir.D01G026750 Gossypium hirsutum HOM05D005238 ORTHO05D006337 2.7e-22 109.4 73 69.9
CDE12G0696 Ceratophyllum demersum HOM05D005238 ORTHO05D006337 4.7e-22 108.6 67 70.1
PSO017G0328 Papaver somniferum HOM05D005238 ORTHO05D006337 4.7e-22 108.6 74 67.6
AT1G16610 Arabidopsis thaliana HOM05D005238 ORTHO05D006337 6.1e-22 108.2 66 74.2
CARHR017080 Cardamine hirsuta HOM05D005238 ORTHO05D006337 6.1e-22 108.2 73 69.9
FAN16G2086 Fragaria x ananassa HOM05D005238 ORTHO05D006337 8.0e-22 107.8 73 68.5
Gohir.D13G157300 Gossypium hirsutum HOM05D005238 ORTHO05D006337 1.0e-21 107.5 73 68.5
SEGI_03141 Sequoiadendron giganteum HOM05D005238 ORTHO05D006337 1.0e-21 107.5 97 58.8
Hma1.2p1_0334F.1_g128770 Hydrangea macrophylla HOM05D005238 ORTHO05D006337 1.4e-21 107.1 100 57.0
Os01g0959000 Oryza sativa ssp. japonica HOM05D005238 ORTHO05D006337 1.8e-21 106.7 81 63.0
Ca_03677_v3 Cicer arietinum L. HOM05D005238 ORTHO05D006337 3.0e-21 105.9 72 69.4
Gorai.013G178100 Gossypium raimondii HOM05D005238 ORTHO05D006337 3.9e-21 105.5 72 68.1
PSO170G0319 Papaver somniferum HOM05D005238 ORTHO05D006337 3.9e-21 105.5 69 68.1
Pp3c12_22790 Physcomitrium patens HOM05D005238 ORTHO05D006337 3.9e-21 105.5 70 71.4
Psat1g011080 Pisum sativum HOM05D005238 ORTHO05D006337 3.9e-21 105.5 74 68.9
Sabra11G0127900 Salix brachista HOM05D001622 ORTHO05D007320 3.9e-21 105.5 144 45.8
HPP92_027055 Vanilla planifolia HOM05D005238 ORTHO05D006337 6.7e-21 104.8 98 54.1
Manes.14G016200 Manihot esculenta HOM05D005238 ORTHO05D006337 8.8e-21 104.4 100 56.0
MELO3C026965.2 Cucumis melo HOM05D005238 ORTHO05D006337 1.5e-20 103.6 99 54.5
Duzib187G0607 Durio zibethinus HOM05D005238 ORTHO05D006337 1.5e-20 103.6 72 66.7
Lj3g0001441 Lotus japonicus HOM05D005238 ORTHO05D006337 3.3e-20 102.4 68 69.1
SMO271G0048 Selaginella moellendorffii HOM05D005238 ORTHO05D006337 3.3e-20 102.4 77 63.6
HPP92_011420 Vanilla planifolia HOM05D005238 ORTHO05D006337 3.3e-20 102.4 74 67.6
Zm00001eb140450 Zea mays HOM05D005238 ORTHO05D006337 5.7e-20 101.7 66 69.7
Zm00001eb362580 Zea mays HOM05D005238 ORTHO05D006337 7.4e-20 101.3 70 67.1
Sed0003933 Sechium edule HOM05D005238 ORTHO05D006337 9.7e-20 100.9 70 67.1
BcaB07g32526 Brassica carinata HOM05D002708 ORTHO05D006337 1.1e-18 97.4 66 71.2
Atru.chr2.1794 Acer truncatum HOM05D005238 ORTHO05D006337 7.0e-18 94.7 120 45.8
Duzib268G1788 Durio zibethinus HOM05D005238 ORTHO05D006337 2.0e-12 76.6 49 67.3
Cre03.g164950 Chlamydomonas reinhardtii HOM05D005238 ORTHO05D006337 1.4e-10 70.5 61 54.1
CAN.G24.9 Capsicum annuum HOM05D005238 ORTHO05D006337 2.0e-09 66.6 61 62.3
CSS0017399 Camellia sinensis var. sinensis HOM05D005238 ORTHO05D006337 4.5e-09 65.5 47 63.8
COL.COLO4_16853 Corchorus olitorius HOM05D000629 ORTHO05D016154 4.5e-09 65.5 51 51.0
AT1G79100 Arabidopsis thaliana HOM05D005238 ORTHO05D006337 2.2e-08 63.2 44 68.2
SMO364G0823 Selaginella moellendorffii HOM05D005238 ORTHO05D006337 1.1e-07 60.8 42 61.9
vmacro03104 Vaccinium macrocarpon HOM05D000142 ORTHO05D000124 1.5e-07 60.5 63 42.9
Pp3c3_28550 Physcomitrium patens HOM05D005238 ORTHO05D006337 2.5e-07 59.7 35 71.4
Oeu024228.1 Olea europaea HOM05D003145 ORTHO05D003586 3.2e-07 59.3 72 37.5
Aqoxy4G02998 Aquilegia oxysepala HOM05D000142 ORTHO05D000124 4.2e-07 58.9 75 40.0
Os08g0139000 Oryza sativa ssp. japonica HOM05D000142 ORTHO05D000124 4.2e-07 58.9 79 39.2
Sed0025992 Sechium edule HOM05D001197 ORTHO05D000124 4.2e-07 58.9 82 39.0
HanXRQChr14g0433281 Helianthus annuus HOM05D001197 ORTHO05D000124 5.5e-07 58.5 100 33.0
Aqoxy2G02026 Aquilegia oxysepala HOM05D001197 ORTHO05D000124 7.2e-07 58.2 65 44.6
Haze_18990 Corylus avellana HOM05D001197 ORTHO05D000124 9.4e-07 57.8 84 38.1
GSVIVG01034107001 Vitis vinifera HOM05D002256 ORTHO05D002533 9.4e-07 57.8 66 39.4
ClCG04G012480 Citrullus lanatus HOM05D001197 ORTHO05D000124 1.2e-06 57.4 77 40.3
MELO3C001961.2 Cucumis melo HOM05D001197 ORTHO05D000124 1.2e-06 57.4 78 38.5
Actinidia34105 Actinidia chinensis HOM05D003145 ORTHO05D003586 1.6e-06 57.0 88 36.4
FAN04G2377 Fragaria x ananassa HOM05D001197 ORTHO05D000124 1.6e-06 57.0 92 33.7
Prupe.6G082600 Prunus persica HOM05D000142 ORTHO05D000124 1.6e-06 57.0 65 36.9
FvH4_5g18110 Fragaria vesca HOM05D001197 ORTHO05D000124 2.1e-06 56.6 92 33.7
FAN18G0184 Fragaria x ananassa HOM05D001197 ORTHO05D000124 2.1e-06 56.6 92 33.7
Glyma.16G217600 Glycine max HOM05D001197 ORTHO05D000124 2.1e-06 56.6 83 34.9
Prupe.6G082400 Prunus persica HOM05D000142 ORTHO05D000124 2.1e-06 56.6 62 45.2
ATR0222G027 Amborella trichopoda HOM05D001197 ORTHO05D000124 2.7e-06 56.2 65 40.0
Glyma.06G263200 Glycine max HOM05D001197 ORTHO05D000124 2.7e-06 56.2 78 38.5
Phvul.L003243 Phaseolus vulgaris HOM05D001197 ORTHO05D000124 2.7e-06 56.2 64 42.2
Aa31LG4G3740 Aethionema arabicum HOM05D001197 ORTHO05D000124 3.6e-06 55.8 82 32.9
AL2G33280 Arabidopsis lyrata HOM05D001197 ORTHO05D000124 3.6e-06 55.8 86 37.2
MD06G1236600 Malus domestica HOM05D001197 ORTHO05D000124 3.6e-06 55.8 81 37.0
Prupe.5G241100 Prunus persica HOM05D001197 ORTHO05D000124 3.6e-06 55.8 87 36.8
Eucgr.H00611 Eucalyptus grandis HOM05D001197 ORTHO05D000124 4.7e-06 55.5 65 38.5
MBI08_g09791_MAGBIO Magnolia biondii HOM05D001197 ORTHO05D000124 4.7e-06 55.5 96 33.3
Rhsim13G0086000 Rhododendron simsii HOM05D000221 ORTHO05D000124 4.7e-06 55.5 58 41.4
AT1G73530 Arabidopsis thaliana HOM05D001197 ORTHO05D000124 6.1e-06 55.1 62 40.3
arahy.Tifrunner.gnm1.ann1.K1P89V Arachis hypogaea HOM05D001197 ORTHO05D000124 6.1e-06 55.1 67 40.3
arahy.Tifrunner.gnm1.ann1.QW9ZFX Arachis hypogaea HOM05D001197 ORTHO05D000124 6.1e-06 55.1 67 40.3
C06p33980 Brassica napus HOM05D001858 ORTHO05D001838 6.1e-06 55.1 81 38.3
BolC6t38513H Brassica oleracea HOM05D001197 ORTHO05D000124 6.1e-06 55.1 81 38.3
CSS0040420 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 6.1e-06 55.1 89 34.8
CiPaw.15G151100 Carya illinoinensis HOM05D001197 ORTHO05D000124 6.1e-06 55.1 65 38.5
FvH4_3g35300 Fragaria vesca HOM05D000142 ORTHO05D000124 6.1e-06 55.1 65 41.5
FAN11G0213 Fragaria x ananassa HOM05D000142 ORTHO05D000124 6.1e-06 55.1 65 41.5
FAN21G0095 Fragaria x ananassa HOM05D000142 ORTHO05D000124 6.1e-06 55.1 62 40.3
Rhsim03G0179900 Rhododendron simsii HOM05D003145 ORTHO05D003586 6.1e-06 55.1 62 40.3
PGSC0003DMG400008817 Solanum tuberosum HOM05D001197 ORTHO05D000124 6.1e-06 55.1 65 38.5
EL10Ac4g08004 Beta vulgaris HOM05D000142 ORTHO05D000124 8.0e-06 54.7 83 36.1
ECA247G3146 Erigeron canadensis HOM05D000142 ORTHO05D000124 8.0e-06 54.7 78 39.7
HanXRQChr04g0106981 Helianthus annuus HOM05D000142 ORTHO05D000124 8.0e-06 54.7 65 41.5
RcHm_v2.0_Chr7g0177501 Rosa chinensis HOM05D001197 ORTHO05D000124 8.0e-06 54.7 87 36.8
GSVIVG01038128001 Vitis vinifera HOM05D000142 ORTHO05D000124 8.0e-06 54.7 57 43.9


User provided reference genes

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