Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000373g0230 Nicotiana tabacum HOM05D000216 ORTHO05D000634 8.6e-38 159.8 81 100.0
CAN.G1180.14 Capsicum annuum HOM05D000216 ORTHO05D000634 8.3e-09 63.5 36 91.7
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 8.3e-09 63.5 36 91.7
Nitab4.5_0016007g0020 Nicotiana tabacum HOM05D000216 ORTHO05D000634 8.3e-09 63.5 36 91.7
Peaxi162Scf00379g00084 Petunia axillaris HOM05D000216 ORTHO05D000634 8.3e-09 63.5 36 91.7
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 8.3e-09 63.5 36 91.7
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 8.3e-09 63.5 36 91.7
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 8.3e-09 63.5 36 91.7
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 8.3e-09 63.5 36 91.7
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 8.3e-09 63.5 36 91.7
PGSC0003DMG400017664 Solanum tuberosum HOM05D000216 ORTHO05D000634 8.3e-09 63.5 36 91.7
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 1.9e-08 62.4 36 88.9
CSS0009554 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D000634 3.2e-08 61.6 36 86.1
Lj2C1237G0 Lonicera japonica HOM05D000216 ORTHO05D003638 3.2e-08 61.6 43 72.1
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 3.2e-08 61.6 36 86.1
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 4.1e-08 61.2 37 83.8
CAN.G612.1 Capsicum annuum HOM05D000216 ORTHO05D000634 4.1e-08 61.2 36 88.9
CAN.G939.12 Capsicum annuum HOM05D000216 ORTHO05D000634 4.1e-08 61.2 36 86.1
Nitab4.5_0001761g0220 Nicotiana tabacum HOM05D000216 ORTHO05D000634 5.4e-08 60.8 43 69.8
MELO3C001268.2 Cucumis melo HOM05D000216 ORTHO05D000634 7.1e-08 60.5 35 88.6
MELO3C028015.2 Cucumis melo HOM05D000216 ORTHO05D000634 7.1e-08 60.5 35 88.6
Gohir.D07G190801 Gossypium hirsutum HOM05D000540 ORTHO05D000681 7.1e-08 60.5 35 77.1
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 7.1e-08 60.5 36 86.1
Hma1.2p1_3151F.1_g333240 Hydrangea macrophylla HOM05D000175 ORTHO05D000481 7.1e-08 60.5 36 86.1
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 7.1e-08 60.5 36 83.3
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 7.1e-08 60.5 36 83.3
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 9.2e-08 60.1 35 85.7
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 9.2e-08 60.1 35 88.6
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 9.2e-08 60.1 35 88.6
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 9.2e-08 60.1 35 88.6
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 9.2e-08 60.1 35 85.7
Gohir.A05G086066 Gossypium hirsutum HOM05D000216 ORTHO05D000634 9.2e-08 60.1 35 88.6
Gohir.A09G103316 Gossypium hirsutum HOM05D000216 ORTHO05D000634 9.2e-08 60.1 35 88.6
HanXRQChr14g0454991 Helianthus annuus HOM05D000216 ORTHO05D000634 9.2e-08 60.1 40 72.5
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 9.2e-08 60.1 35 88.6
QL08p049862 Quercus lobata HOM05D000216 ORTHO05D000634 9.2e-08 60.1 35 85.7
QL93p0837_0001 Quercus lobata HOM05D000216 ORTHO05D000634 9.2e-08 60.1 35 85.7
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 9.2e-08 60.1 35 85.7
Sc11g0005800 Simmondsia chinensis HOM05D000216 ORTHO05D000634 9.2e-08 60.1 35 85.7
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 1.2e-07 59.7 35 85.7
HanXRQChr00c0125g0571741 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-07 59.7 36 83.3
HanXRQChr00c0300g0573181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-07 59.7 36 83.3
HanXRQChr00c0313g0573461 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-07 59.7 36 83.3
HanXRQChr00c0601g0576531 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-07 59.7 36 83.3
HanXRQChr07g0188311 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-07 59.7 36 83.3
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-07 59.7 36 83.3
HanXRQChr09g0238301 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-07 59.7 36 83.3
HanXRQChr10g0282521 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-07 59.7 36 83.3
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-07 59.7 36 83.3
HanXRQChr15g0470971 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-07 59.7 36 83.3
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 1.2e-07 59.7 36 83.3
Lsat_1_v5_gn_1_6760 Lactuca sativa HOM05D003214 ORTHO05D004330 1.2e-07 59.7 36 83.3
Lsat_1_v5_gn_4_51820 Lactuca sativa HOM05D000216 ORTHO05D009870 1.2e-07 59.7 36 83.3
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 1.2e-07 59.7 36 83.3
Lj2C1239G21 Lonicera japonica HOM05D000216 ORTHO05D000634 1.2e-07 59.7 35 85.7
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 1.2e-07 59.7 35 85.7
CAN.G219.16 Capsicum annuum HOM05D000743 ORTHO05D000580 1.6e-07 59.3 36 88.9
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.6e-07 59.3 39 71.8
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.6e-07 59.3 39 71.8
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.6e-07 59.3 39 71.8
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.6e-07 59.3 39 71.8
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.6e-07 59.3 39 71.8
Hund27917 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.6e-07 59.3 39 71.8
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.6e-07 59.3 39 71.8
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.6e-07 59.3 39 71.8
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.6e-07 59.3 39 71.8
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.6e-07 59.3 39 71.8
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.6e-07 59.3 39 71.8
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.6e-07 59.3 39 71.8
Eucgr.K02695 Eucalyptus grandis HOM05D000216 ORTHO05D000634 2.1e-07 58.9 35 85.7
Psat4g062520 Pisum sativum HOM05D000216 ORTHO05D003518 2.1e-07 58.9 35 82.9
Psat5g134640 Pisum sativum HOM05D000216 ORTHO05D000634 2.1e-07 58.9 35 82.9
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 2.1e-07 58.9 35 85.7
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 2.1e-07 58.9 35 85.7
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 2.7e-07 58.5 35 85.7
AUR62021208 Chenopodium quinoa HOM05D000216 ORTHO05D000634 2.7e-07 58.5 35 85.7
AUR62030170 Chenopodium quinoa HOM05D000216 ORTHO05D000634 2.7e-07 58.5 35 85.7
AUR62042525 Chenopodium quinoa HOM05D000216 ORTHO05D000580 2.7e-07 58.5 35 85.7
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 2.7e-07 58.5 35 82.9
Nn3g18459 Nelumbo nucifera HOM05D000216 ORTHO05D000634 2.7e-07 58.5 35 85.7
MELO3C028016.2 Cucumis melo HOM05D000216 ORTHO05D000634 3.5e-07 58.2 35 85.7
HanXRQChr12g0386351 Helianthus annuus HOM05D000216 ORTHO05D000634 4.6e-07 57.8 36 80.6
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 4.6e-07 57.8 35 82.9
Medtr7g069560 Medicago truncatula HOM05D000216 ORTHO05D000634 4.6e-07 57.8 35 82.9
Medtr7g116700 Medicago truncatula HOM05D000216 ORTHO05D000634 4.6e-07 57.8 35 82.9
Nn092s42879 Nelumbo nucifera HOM05D000216 ORTHO05D000634 4.6e-07 57.8 36 80.6
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 4.6e-07 57.8 35 85.7
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 6.0e-07 57.4 35 82.9
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 6.0e-07 57.4 35 82.9
Ah.10g028500 Amaranthus hybridus HOM05D000216 ORTHO05D000634 6.0e-07 57.4 35 82.9
Lsat_1_v5_gn_4_163961 Lactuca sativa HOM05D000216 ORTHO05D003518 6.0e-07 57.4 49 61.2
RhsimPtG0004600 Rhododendron simsii HOM05D000743 ORTHO05D000580 6.0e-07 57.4 36 86.1
Sc07g0006590 Simmondsia chinensis HOM05D000216 ORTHO05D000634 6.0e-07 57.4 34 85.3
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 6.0e-07 57.4 36 86.1
CAN.G100.42 Capsicum annuum HOM05D000216 ORTHO05D000634 7.8e-07 57.0 36 77.8
HanXRQChr12g0386361 Helianthus annuus HOM05D000216 ORTHO05D000634 7.8e-07 57.0 36 80.6
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 7.8e-07 57.0 35 82.9
PGSC0003DMG400020297 Solanum tuberosum HOM05D000216 ORTHO05D000634 7.8e-07 57.0 54 61.1
MD09G1229200 Malus domestica HOM05D000216 ORTHO05D003518 1.0e-06 56.6 38 73.7
Gorai.008G102500 Gossypium raimondii HOM05D000216 ORTHO05D000634 1.3e-06 56.2 36 77.8
Gohir.D12G094332 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.7e-06 55.8 36 77.8
Oeu023333.1 Olea europaea HOM05D000216 ORTHO05D000634 2.3e-06 55.5 38 71.1
Pp3c7_4990 Physcomitrium patens HOM05D000216 ORTHO05D000634 2.3e-06 55.5 38 78.9
HPP92_007917 Vanilla planifolia HOM05D000216 ORTHO05D000634 3.0e-06 55.1 36 72.2
SGA_v2.0_scaffold119G32689 Striga asiatica HOM05D000216 ORTHO05D000634 3.9e-06 54.7 35 80.0
Nitab4.5_0016036g0020 Nicotiana tabacum HOM05D000216 ORTHO05D000634 5.1e-06 54.3 33 84.8
CDE07G0287 Ceratophyllum demersum HOM05D003429 ORTHO05D003873 6.6e-06 53.9 35 80.0
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 6.6e-06 53.9 34 82.4
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 6.6e-06 53.9 34 82.4
HanXRQChr11g0322741 Helianthus annuus HOM05D000216 ORTHO05D000634 8.6e-06 53.5 36 75.0
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 8.6e-06 53.5 35 80.0
Solyc08g028900.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 8.6e-06 53.5 38 78.9
Zm00001eb314280 Zea mays HOM05D000216 ORTHO05D000634 8.6e-06 53.5 35 80.0
Zm00001eb435270 Zea mays HOM05D000216 ORTHO05D000634 8.6e-06 53.5 35 80.0
Zm00001eb435480 Zea mays HOM05D000216 ORTHO05D000634 8.6e-06 53.5 35 80.0
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 8.6e-06 53.5 35 80.0
Zm00001eb437260 Zea mays HOM05D000216 ORTHO05D000634 8.6e-06 53.5 35 80.0


User provided reference genes

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