Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000196g0090 Nicotiana tabacum HOM05D000688 ORTHO05D016546 4.2e-63 244.6 128 100.0
Nitab4.5_0000105g0140 Nicotiana tabacum HOM05D000688 ORTHO05D003888 2.6e-49 198.7 109 92.7
PGSC0003DMG400011444 Solanum tuberosum HOM05D000688 ORTHO05D003888 8.4e-48 193.7 109 89.0
Nitab4.5_0004643g0010 Nicotiana tabacum HOM05D000688 ORTHO05D003888 3.2e-47 191.8 109 89.9
Nitab4.5_0001147g0050 Nicotiana tabacum HOM05D000688 ORTHO05D016546 4.2e-47 191.4 128 80.5
Solyc10g078860.2 Solanum lycopersicum HOM05D000688 ORTHO05D003888 9.3e-47 190.3 109 87.2
Sopen10g029490 Solanum pennellii HOM05D000688 ORTHO05D003888 9.3e-47 190.3 109 87.2
CAN.G960.4 Capsicum annuum HOM05D000688 ORTHO05D003888 5.1e-45 184.5 109 85.3
Solyc10g078880.2 Solanum lycopersicum HOM05D000688 ORTHO05D003888 1.5e-44 183.0 109 82.6
Sopen10g029500 Solanum pennellii HOM05D000688 ORTHO05D003888 2.5e-44 182.2 109 82.6
PGSC0003DMG400011445 Solanum tuberosum HOM05D000688 ORTHO05D003888 3.3e-44 181.8 109 83.5
CAN.G960.25 Capsicum annuum HOM05D000688 ORTHO05D003888 2.8e-43 178.7 109 81.7
Peaxi162Scf01517g00143 Petunia axillaris HOM05D000688 ORTHO05D003888 6.3e-43 177.6 109 81.7
Peaxi162Scf00003g04511 Petunia axillaris HOM05D000688 ORTHO05D003888 5.3e-42 174.5 108 80.6
CAN.G960.6 Capsicum annuum HOM05D000688 ORTHO05D003888 8.2e-35 150.6 86 88.4
Dinv01617 Davidia involucrata HOM05D000688 ORTHO05D003888 2.6e-33 145.6 109 67.0
Cc04_g08890 Coffea canephora HOM05D000688 ORTHO05D003888 1.0e-32 143.7 109 68.8
CAN.G960.34 Capsicum annuum HOM05D000688 ORTHO05D003888 8.5e-32 140.6 86 82.6
CSS0019460 Camellia sinensis var. sinensis HOM05D000688 ORTHO05D003888 4.2e-31 138.3 109 64.2
Ciclev10000078m.g Citrus clementina HOM05D000688 ORTHO05D003888 2.7e-30 135.6 109 63.3
Potri.015G003000 Populus trichocarpa HOM05D000688 ORTHO05D003888 7.9e-30 134.0 110 65.5
COL.COLO4_05983 Corchorus olitorius HOM05D000688 ORTHO05D003888 1.4e-29 133.3 106 67.0
Manes.04G155900 Manihot esculenta HOM05D000688 ORTHO05D003888 1.4e-29 133.3 109 62.4
Rhsim11G0122400 Rhododendron simsii HOM05D000688 ORTHO05D003888 1.8e-29 132.9 109 61.5
PGR031G2689 Punica granatum HOM05D000688 ORTHO05D003888 2.3e-29 132.5 109 64.2
Migut.B01181 Erythranthe guttata HOM05D000688 ORTHO05D003888 5.1e-29 131.3 108 65.7
MELO3C024455.2 Cucumis melo HOM05D000688 ORTHO05D003888 6.7e-29 131.0 110 61.8
CsaV3_7G035430 Cucumis sativus L. HOM05D000688 ORTHO05D003888 6.7e-29 131.0 110 61.8
MSTRG.20498 Avicennia marina HOM05D000688 ORTHO05D003888 1.1e-28 130.2 109 64.2
Ah.01g004280 Amaranthus hybridus HOM05D000688 ORTHO05D003888 2.0e-28 129.4 109 61.5
DCAR_022371 Daucus carota HOM05D000688 ORTHO05D003888 2.0e-28 129.4 109 63.3
Thecc.10G140700 Theobroma cacao HOM05D000688 ORTHO05D003888 2.0e-28 129.4 109 61.5
TAR376G0407 Trochodendron aralioides HOM05D000688 ORTHO05D003888 2.0e-28 129.4 108 61.1
Duzib106G0735 Durio zibethinus HOM05D000688 ORTHO05D003888 2.6e-28 129.0 106 62.3
Glyma.01G006500 Glycine max HOM05D000688 ORTHO05D003888 3.3e-28 128.6 108 60.2
Glyma.07G125300 Glycine max HOM05D000688 ORTHO05D003888 3.3e-28 128.6 108 61.1
Haze_02986 Corylus avellana HOM05D000688 ORTHO05D003888 4.4e-28 128.3 108 63.9
Gohir.A05G399000 Gossypium hirsutum HOM05D000688 ORTHO05D003888 7.4e-28 127.5 106 62.3
AUR62013825 Chenopodium quinoa HOM05D000688 ORTHO05D003888 9.7e-28 127.1 107 60.7
Phvul.004G175000 Phaseolus vulgaris HOM05D000688 ORTHO05D003888 9.7e-28 127.1 106 61.3
Sed0017010 Sechium edule HOM05D000688 ORTHO05D003888 1.7e-27 126.3 110 64.5
Eucgr.A00794 Eucalyptus grandis HOM05D000688 ORTHO05D003888 2.8e-27 125.6 106 65.1
VMungo0464G0248 Vigna mungo HOM05D000688 ORTHO05D003888 3.7e-27 125.2 106 61.3
Atru.chr12.1245 Acer truncatum HOM05D000688 ORTHO05D003888 4.8e-27 124.8 106 63.2
SalBow4G1891 Salvia bowleyana HOM05D000688 ORTHO05D003888 4.8e-27 124.8 108 63.9
Gohir.D04G016900 Gossypium hirsutum HOM05D000688 ORTHO05D003888 6.3e-27 124.4 106 60.4
Gorai.012G019600 Gossypium raimondii HOM05D000688 ORTHO05D003888 6.3e-27 124.4 106 60.4
Sc14g0004780 Simmondsia chinensis HOM05D000688 ORTHO05D003888 6.3e-27 124.4 109 55.0
Ca_23464_v3 Cicer arietinum L. HOM05D000688 ORTHO05D003888 1.1e-26 123.6 108 62.0
SGA_v2.0_scaffold375G50252 Striga asiatica HOM05D000688 ORTHO05D003888 1.1e-26 123.6 117 60.7
THA.LOC104811399 Tarenaya hassleriana HOM05D000688 ORTHO05D003888 1.1e-26 123.6 109 62.4
vmacro01621 Vaccinium macrocarpon HOM05D000688 ORTHO05D003888 1.1e-26 123.6 109 60.6
Nn2g14058 Nelumbo nucifera HOM05D000688 ORTHO05D003888 1.4e-26 123.2 109 58.7
Lalb_Chr01g0000861 Lupinus albus HOM05D000688 ORTHO05D003888 1.8e-26 122.9 109 56.9
Atru.chr4.3095 Acer truncatum HOM05D000688 ORTHO05D003888 4.1e-26 121.7 109 59.6
DCAR_012513 Daucus carota HOM05D000688 ORTHO05D003888 4.1e-26 121.7 109 57.8
CiPaw.14G009900 Carya illinoinensis HOM05D000688 ORTHO05D003888 5.3e-26 121.3 109 62.4
QL05p087351 Quercus lobata HOM05D000688 ORTHO05D003888 5.3e-26 121.3 108 61.1
SalBow5G4138 Salvia bowleyana HOM05D000688 ORTHO05D003888 7.0e-26 120.9 108 62.0
FvH4_7g03930 Fragaria vesca HOM05D000688 ORTHO05D003888 9.1e-26 120.6 108 54.6
FAN01G1250 Fragaria x ananassa HOM05D000688 ORTHO05D003888 1.2e-25 120.2 108 54.6
PSO339G4862 Papaver somniferum HOM05D000688 ORTHO05D003888 1.2e-25 120.2 108 54.6
PSO384G1949 Papaver somniferum HOM05D000688 ORTHO05D003888 1.2e-25 120.2 108 54.6
AT5G45140 Arabidopsis thaliana HOM05D000688 ORTHO05D003888 1.5e-25 119.8 106 63.2
AL8G14060 Arabidopsis lyrata HOM05D000688 ORTHO05D003888 3.5e-25 118.6 109 60.6
MBI01_g22371_MAGBIO Magnolia biondii HOM05D000688 ORTHO05D003888 3.5e-25 118.6 109 54.1
BcaB07g30474 Brassica carinata HOM05D000688 ORTHO05D003888 4.5e-25 118.2 109 59.6
CANSAT21G2099 Cannabis sativa HOM05D000688 ORTHO05D003888 4.5e-25 118.2 110 57.3
ECA236G1694 Erigeron canadensis HOM05D000688 ORTHO05D003888 4.5e-25 118.2 109 53.2
BcaC03g16725 Brassica carinata HOM05D000688 ORTHO05D003888 7.7e-25 117.5 106 61.3
Carub.0008s0305 Capsella rubella HOM05D000688 ORTHO05D003888 7.7e-25 117.5 109 58.7
CARHR177390 Cardamine hirsuta HOM05D000688 ORTHO05D003888 7.7e-25 117.5 110 59.1
Psat4g164800 Pisum sativum HOM05D000688 ORTHO05D003888 1.0e-24 117.1 108 58.3
TPR.G26445 Trifolium pratense HOM05D000688 ORTHO05D003888 1.0e-24 117.1 108 55.6
Aqoxy4G01311 Aquilegia oxysepala HOM05D000688 ORTHO05D003888 1.3e-24 116.7 108 56.5
Aqoxy6G00568 Aquilegia oxysepala HOM05D000688 ORTHO05D003888 1.3e-24 116.7 108 56.5
Lsat_1_v5_gn_7_12221 Lactuca sativa HOM05D000688 ORTHO05D003888 1.7e-24 116.3 109 56.9
PSO478G2833 Papaver somniferum HOM05D000688 ORTHO05D003888 1.7e-24 116.3 108 52.8
TWI63G1180 Tripterygium wilfordii HOM05D000688 ORTHO05D003888 1.7e-24 116.3 106 59.4
TAR371G0646 Trochodendron aralioides HOM05D000688 ORTHO05D003888 1.7e-24 116.3 108 56.5
HanXRQChr04g0119821 Helianthus annuus HOM05D000688 ORTHO05D003888 2.2e-24 115.9 109 53.2
RcHm_v2.0_Chr1g0327591 Rosa chinensis HOM05D000688 ORTHO05D003888 2.2e-24 115.9 106 54.7
Aqoxy3G02794 Aquilegia oxysepala HOM05D000688 ORTHO05D003888 3.8e-24 115.2 108 56.5
Lj5g0025980 Lotus japonicus HOM05D000688 ORTHO05D003888 3.8e-24 115.2 109 56.0
Prupe.2G044100 Prunus persica HOM05D000688 ORTHO05D003888 3.8e-24 115.2 108 52.8
Thhalv10000748m.g Eutrema salsugineum HOM05D000688 ORTHO05D003888 5.0e-24 114.8 109 58.7
MD14G1029000 Malus domestica HOM05D000688 ORTHO05D003888 1.1e-23 113.6 105 54.3
BcaC06g34487 Brassica carinata HOM05D000688 ORTHO05D003888 1.5e-23 113.2 109 56.9
C02p45870 Brassica napus HOM05D000688 ORTHO05D003888 1.9e-23 112.8 109 59.6
FAN03G3082 Fragaria x ananassa HOM05D000688 ORTHO05D003888 1.9e-23 112.8 108 53.7
CARHR110550 Cardamine hirsuta HOM05D000688 ORTHO05D003888 2.5e-23 112.5 109 56.9
Medtr8g023445 Medicago truncatula HOM05D000688 ORTHO05D003888 2.5e-23 112.5 107 54.2
FAN06G4099 Fragaria x ananassa HOM05D000688 ORTHO05D003888 4.2e-23 111.7 108 52.8
Os03g0403100 Oryza sativa ssp. japonica HOM05D000688 ORTHO05D003888 5.5e-23 111.3 106 54.7
Oeu006782.2 Olea europaea HOM05D000688 ORTHO05D003888 9.4e-23 110.5 78 69.2
Aa31LG9G7980 Aethionema arabicum HOM05D000688 ORTHO05D003888 4.7e-22 108.2 106 55.7
EL10Ac1g01996 Beta vulgaris HOM05D000688 ORTHO05D003888 8.0e-22 107.5 88 61.4
Zm00001eb269100 Zea mays HOM05D000688 ORTHO05D003888 1.4e-21 106.7 106 49.1
Lj3g0004991 Lotus japonicus HOM05D000688 ORTHO05D003888 1.8e-21 106.3 110 51.8
A02p28860 Brassica napus HOM05D000688 ORTHO05D003888 2.3e-21 105.9 109 56.9
Gorai.007G005200 Gossypium raimondii HOM05D000688 ORTHO05D003888 2.3e-21 105.9 106 57.5
Gohir.A11G004801 Gossypium hirsutum HOM05D000688 ORTHO05D003888 3.0e-21 105.5 106 55.7
TPR.G29748 Trifolium pratense HOM05D000688 ORTHO05D003888 3.0e-21 105.5 123 47.2
A06p46750 Brassica napus HOM05D000688 ORTHO05D003888 5.2e-21 104.8 120 51.7
Migut.B01180 Erythranthe guttata HOM05D000688 ORTHO05D003888 8.8e-21 104.0 108 51.9
BolC2t10650H Brassica oleracea HOM05D000688 ORTHO05D003888 1.1e-20 103.6 135 48.1
SMO171G0074 Selaginella moellendorffii HOM05D000688 ORTHO05D003888 2.0e-20 102.8 109 45.0
C07p27930 Brassica napus HOM05D000688 ORTHO05D003888 2.6e-20 102.4 126 49.2
SGA_v2.0_scaffold195G40824 Striga asiatica HOM05D000688 ORTHO05D003888 4.4e-20 101.7 109 51.4
Eucgr.E00987 Eucalyptus grandis HOM05D000688 ORTHO05D016546 2.2e-19 99.4 69 69.6
Pp3c18_11070 Physcomitrium patens HOM05D000688 ORTHO05D003888 3.7e-19 98.6 108 46.3
HPP92_018385 Vanilla planifolia HOM05D000688 ORTHO05D003888 6.3e-19 97.8 108 45.4
FAN08G2264 Fragaria x ananassa HOM05D000688 ORTHO05D003888 1.1e-18 97.1 109 47.7
RcHm_v2.0_Chr7g0227611 Rosa chinensis HOM05D000688 ORTHO05D003888 1.4e-18 96.7 104 49.0
BraA06t27547Z Brassica rapa HOM05D000688 ORTHO05D003888 1.8e-18 96.3 131 47.3
Medtr1g022135 Medicago truncatula HOM05D000688 ORTHO05D003888 5.3e-18 94.7 91 56.0
FvH4_5g31720 Fragaria vesca HOM05D000688 ORTHO05D003888 7.0e-18 94.4 107 45.8
FAN18G2226 Fragaria x ananassa HOM05D000688 ORTHO05D003888 7.0e-18 94.4 107 45.8
unitig_22.g5333 Utricularia gibba HOM05D000688 ORTHO05D003888 7.0e-18 94.4 94 53.2
AagrBONN_evm.TU.Sc2ySwM_344.1343 Anthoceros agrestis HOM05D000688 ORTHO05D003888 1.6e-17 93.2 109 42.2
FAN13G2193 Fragaria x ananassa HOM05D000688 ORTHO05D003888 2.6e-17 92.4 109 46.8
HanXRQChr06g0183351 Helianthus annuus HOM05D000688 ORTHO05D003888 2.6e-17 92.4 120 45.8
Mapoly0097s0027 Marchantia polymorpha HOM05D000688 ORTHO05D003888 4.5e-17 91.7 109 42.2
BcaNung00311 Brassica carinata HOM05D000688 ORTHO05D003888 8.5e-16 87.4 110 49.1
Lj3A924G39 Lonicera japonica HOM05D000688 ORTHO05D016546 1.5e-15 86.7 71 62.0
MCO04G463 Micromonas commoda HOM05D000688 ORTHO05D003888 2.5e-15 85.9 103 46.6
GSVIVG01036596001 Vitis vinifera HOM05D000688 ORTHO05D003888 3.2e-15 85.5 67 62.7
arahy.Tifrunner.gnm1.ann1.RHTP8A Arachis hypogaea HOM05D000688 ORTHO05D003888 5.5e-15 84.7 109 45.0
arahy.Tifrunner.gnm1.ann1.W6893Z Arachis hypogaea HOM05D000688 ORTHO05D003888 5.5e-15 84.7 109 45.0
Hma1.2p1_1342F.1_g276980 Hydrangea macrophylla HOM05D000688 ORTHO05D016546 1.2e-14 83.6 52 78.8
QL05p086844 Quercus lobata HOM05D000688 ORTHO05D003888 1.2e-14 83.6 53 75.5
Cpa.g.sc17.36 Carica papaya HOM05D000688 ORTHO05D016546 2.1e-14 82.8 54 74.1
Sabra15G0001900 Salix brachista HOM05D000688 ORTHO05D003888 2.7e-14 82.4 187 34.2
AUR62036901 Chenopodium quinoa HOM05D000688 ORTHO05D003888 8.8e-13 77.4 92 47.8
Gorai.007G005100 Gossypium raimondii HOM05D000688 ORTHO05D016546 5.7e-12 74.7 53 67.9
PRCOL_00004652 Prasinoderma coloniale HOM05D000688 ORTHO05D003888 1.7e-11 73.2 104 36.5
CBR_g48573 Chara braunii HOM05D000688 ORTHO05D003888 2.2e-11 72.8 104 36.5
TPR.G16383 Trifolium pratense HOM05D000688 ORTHO05D003888 4.8e-11 71.6 106 41.5
SEGI_07418 Sequoiadendron giganteum HOM05D000688 ORTHO05D016546 2.4e-10 69.3 53 54.7
Cfa019815 Carpinus fangiana HOM05D000688 ORTHO05D016546 1.2e-09 67.0 45 75.6
Cfa026358 Carpinus fangiana HOM05D000688 ORTHO05D003888 1.6e-09 66.6 109 33.9
AagrBONN_evm.TU.Sc2ySwM_344.1489 Anthoceros agrestis HOM05D000688 ORTHO05D016546 2.9e-08 62.4 44 63.6


User provided reference genes

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