Gene: Pp3c18_11070
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c18_11070
- Transcript Identifier Pp3c18_11070V3.3
- Gene Type Coding gene
- Location Chr18 : 7867534-7877858 : negative
Gene Family Information
- ID HOM05D000688
- #Genes/#Species 832/100
- Phylogenetic origin
- ID ORTHO05D003888
- #Genes/#Species 200/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c18_11070V3.3
- pacid 32982748
- alias Phpat.018G035800
- alias Phypa_176819
- alias Pp1s19_315V6
- uniprot A0A2K1J0N5
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006351 | IEA | GOA Database | transcription, DNA-templated | |
| GO:0006351 | IEA | InterPro | transcription, DNA-templated | |
| GO:0009561 | ISO | PLAZA Integrative Orthology | megagametogenesis | AT5G45140 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003899 | IBA IEA | GOA Database | DNA-directed 5'-3' RNA polymerase activity | |
| GO:0003899 | IEA | InterPro | DNA-directed 5'-3' RNA polymerase activity | |
| GO:0032549 | IEA | GOA Database | ribonucleoside binding | |
| GO:0032549 | IEA | InterPro | ribonucleoside binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0016779 | IEA | GOA Database | nucleotidyltransferase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005666 | IBA | GOA Database | RNA polymerase III complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR037033 | DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily |
| IPR015712 | DNA-directed RNA polymerase, subunit 2 |
| IPR014724 | RNA polymerase Rpb2, OB-fold |
| IPR007120 | DNA-directed RNA polymerase, subunit 2, hybrid-binding domain |
| IPR007641 | RNA polymerase Rpb2, domain 7 |
| IPR007646 | RNA polymerase Rpb2, domain 4 |
| IPR007645 | RNA polymerase Rpb2, domain 3 |
| IPR007644 | RNA polymerase, beta subunit, protrusion |
| IPR037034 | RNA polymerase Rpb2, domain 2 superfamily |
| IPR007647 | RNA polymerase Rpb2, domain 5 |
| IPR007642 | RNA polymerase Rpb2, domain 2 |
| Mapman id | Description |
|---|---|
| 15.1.3.2 | RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol III catalytic components.subunit 2 |