Gene: Lj5g0025980

General Information

Structural Information

Species Lotus japonicus
Gene Identifier Lj5g0025980
Transcript Identifier Lj5g0025980.1
Gene Type Coding gene
Location chr5 : 2908622-2942114 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000688
#Genes/#Species 832/100
Phylogenetic origin

ID ORTHO05D003888
#Genes/#Species 200/99
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

id Lj5g0025980.Lj1.0v1
pacid 44926184

Descriptions

Short descriptions
Ortholog descriptions

Description K03021 - DNA-directed RNA polymerase III subunit RPC2 (RPC2, POLR3B)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006351	IEA	InterPro	transcription, DNA-templated
GO:0009561	ISO	PLAZA Integrative Orthology	megagametogenesis	AT5G45140

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003677	IEA	InterPro	DNA binding
GO:0003899	IEA	InterPro	DNA-directed 5'-3' RNA polymerase activity
GO:0032549	IEA	InterPro	ribonucleoside binding

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR007645	RNA polymerase Rpb2, domain 3
IPR037034	RNA polymerase Rpb2, domain 2 superfamily
IPR007641	RNA polymerase Rpb2, domain 7
IPR037033	DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily
IPR007647	RNA polymerase Rpb2, domain 5
IPR007120	DNA-directed RNA polymerase, subunit 2, hybrid-binding domain
IPR015712	DNA-directed RNA polymerase, subunit 2
IPR007644	RNA polymerase, beta subunit, protrusion
IPR007646	RNA polymerase Rpb2, domain 4
IPR007642	RNA polymerase Rpb2, domain 2
IPR014724	RNA polymerase Rpb2, OB-fold

Mapman id	Description
15.1.3.2	RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol III catalytic components.subunit 2