Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.O00436 Erythranthe guttata HOM05D005149 ORTHO05D006251 1.4e-111 406.4 209 100.0
Migut.N01878 Erythranthe guttata HOM05D005149 ORTHO05D006251 1.1e-92 343.6 192 92.7
MSTRG.5085 Avicennia marina HOM05D005149 ORTHO05D006251 8.0e-64 247.7 183 73.8
SGA_v2.0_scaffold196G40993 Striga asiatica HOM05D005149 ORTHO05D006251 1.8e-63 246.5 184 71.7
SalBow4G1949 Salvia bowleyana HOM05D005149 ORTHO05D006251 7.5e-62 241.1 181 70.2
unitig_749.g13551 Utricularia gibba HOM05D005149 ORTHO05D006251 5.6e-57 224.9 184 65.2
Oeu058668.1 Olea europaea HOM05D005149 ORTHO05D006251 7.5e-54 214.5 181 65.7
CSS0030945 Camellia sinensis var. sinensis HOM05D005149 ORTHO05D006251 7.1e-52 208.0 183 64.5
Hma1.2p1_0327F.1_g126330 Hydrangea macrophylla HOM05D005149 ORTHO05D006251 1.9e-49 199.9 181 59.7
Lsat_1_v5_gn_3_25820 Lactuca sativa HOM05D005149 ORTHO05D006251 8.1e-48 194.5 189 59.3
HanXRQChr06g0174201 Helianthus annuus HOM05D005149 ORTHO05D006251 3.1e-47 192.6 188 58.5
ECA246G4563 Erigeron canadensis HOM05D005149 ORTHO05D006251 5.2e-47 191.8 184 57.1
Dinv24594 Davidia involucrata HOM05D005149 ORTHO05D006251 6.8e-47 191.4 188 56.4
TAR633G2177 Trochodendron aralioides HOM05D005149 ORTHO05D006251 6.8e-47 191.4 181 60.8
Hma1.2p1_0327F.1_g126320 Hydrangea macrophylla HOM05D005149 ORTHO05D006251 1.2e-46 190.7 182 58.2
MD02G1263600 Malus domestica HOM05D005149 ORTHO05D006251 5.8e-46 188.3 172 58.7
Cfa010450 Carpinus fangiana HOM05D005149 ORTHO05D006251 1.3e-45 187.2 171 57.9
PGSC0003DMG400027500 Solanum tuberosum HOM05D005149 ORTHO05D006251 2.2e-45 186.4 189 58.7
Prupe.2G061300 Prunus persica HOM05D005149 ORTHO05D006251 6.4e-45 184.9 168 59.5
MD07G1054600 Malus domestica HOM05D005149 ORTHO05D006251 1.4e-44 183.7 170 58.8
Lj7C543G12 Lonicera japonica HOM05D005149 ORTHO05D006251 1.9e-44 183.3 187 55.6
Nitab4.5_0005056g0010 Nicotiana tabacum HOM05D005149 ORTHO05D006251 5.4e-44 181.8 181 58.0
Sopen01g040620 Solanum pennellii HOM05D005149 ORTHO05D006251 9.2e-44 181.0 185 57.8
Haze_03404 Corylus avellana HOM05D005149 ORTHO05D006251 1.2e-43 180.6 163 55.8
arahy.Tifrunner.gnm1.ann1.PFS9H6 Arachis hypogaea HOM05D005149 ORTHO05D006251 6.0e-43 178.3 173 56.1
arahy.Tifrunner.gnm1.ann1.Q8TWNW Arachis hypogaea HOM05D005149 ORTHO05D006251 6.0e-43 178.3 173 56.1
Actinidia17467 Actinidia chinensis HOM05D005149 ORTHO05D006251 7.8e-43 177.9 188 56.9
Solyc01g096910.3 Solanum lycopersicum HOM05D005149 ORTHO05D006251 1.0e-42 177.6 184 57.6
CANSAT56G0938 Cannabis sativa HOM05D005149 ORTHO05D006251 1.3e-42 177.2 159 57.9
FAN12G0991 Fragaria x ananassa HOM05D005149 ORTHO05D006251 1.1e-41 174.1 171 56.7
PGR142G4466 Punica granatum HOM05D005149 ORTHO05D006251 1.1e-41 174.1 191 53.9
FvH4_4g11870 Fragaria vesca HOM05D005149 ORTHO05D006251 1.5e-41 173.7 171 56.7
Peaxi162Scf00647g00319 Petunia axillaris HOM05D005149 ORTHO05D006251 2.5e-41 172.9 190 55.8
CiPaw.13G047200 Carya illinoinensis HOM05D005149 ORTHO05D006251 4.3e-41 172.2 169 54.4
FAN03G2277 Fragaria x ananassa HOM05D005149 ORTHO05D006251 7.3e-41 171.4 166 57.2
FAN17G1198 Fragaria x ananassa HOM05D005149 ORTHO05D006251 7.3e-41 171.4 171 56.1
CsaV3_6G035780 Cucumis sativus L. HOM05D005149 ORTHO05D006251 9.6e-41 171.0 148 58.1
DCAR_023093 Daucus carota HOM05D005149 ORTHO05D006251 9.6e-41 171.0 180 54.4
vmacro20844 Vaccinium macrocarpon HOM05D005149 ORTHO05D006251 9.6e-41 171.0 196 54.6
RcHm_v2.0_Chr1g0331361 Rosa chinensis HOM05D005149 ORTHO05D006251 1.3e-40 170.6 171 56.1
FvH4_7g05040 Fragaria vesca HOM05D005149 ORTHO05D006251 1.6e-40 170.2 170 56.5
ClCG08G010780 Citrullus lanatus HOM05D005149 ORTHO05D006251 2.1e-40 169.9 148 57.4
Gohir.D13G181800 Gossypium hirsutum HOM05D005149 ORTHO05D006251 4.8e-40 168.7 155 56.1
Gorai.013G207400 Gossypium raimondii HOM05D005149 ORTHO05D006251 6.2e-40 168.3 155 56.1
PSO339G6394 Papaver somniferum HOM05D005149 ORTHO05D006251 8.1e-40 167.9 161 55.9
Lalb_Chr19g0132531 Lupinus albus HOM05D005149 ORTHO05D006251 2.4e-39 166.4 162 54.9
Phvul.011G187600 Phaseolus vulgaris HOM05D005149 ORTHO05D006251 2.4e-39 166.4 161 53.4
FAN07G2641 Fragaria x ananassa HOM05D005149 ORTHO05D006251 3.1e-39 166.0 171 55.0
VMungo1127G0494 Vigna mungo HOM05D005149 ORTHO05D006251 3.1e-39 166.0 160 53.8
Gohir.A09G246100 Gossypium hirsutum HOM05D005149 ORTHO05D006251 4.0e-39 165.6 161 55.3
Psat0s3059g0040 Pisum sativum HOM05D005149 ORTHO05D006251 4.0e-39 165.6 160 55.6
Thecc.10G129400 Theobroma cacao HOM05D005149 ORTHO05D006251 4.0e-39 165.6 160 55.6
QL04p050393 Quercus lobata HOM05D005149 ORTHO05D006251 6.9e-39 164.9 151 55.0
Lj3g0016494 Lotus japonicus HOM05D005149 ORTHO05D006251 2.6e-38 162.9 170 54.1
Gohir.D09G246700 Gossypium hirsutum HOM05D005149 ORTHO05D006251 3.4e-38 162.5 155 54.8
Lalb_Chr03g0032361 Lupinus albus HOM05D005149 ORTHO05D006251 4.4e-38 162.2 165 53.9
Sed0016259 Sechium edule HOM05D005149 ORTHO05D006251 4.4e-38 162.2 188 51.6
MELO3C011385.2 Cucumis melo HOM05D005149 ORTHO05D006251 9.9e-38 161.0 169 52.1
Rhsim01G0121200 Rhododendron simsii HOM05D005149 ORTHO05D006251 9.9e-38 161.0 191 53.4
Sed0022214 Sechium edule HOM05D005149 ORTHO05D006251 9.9e-38 161.0 169 52.1
Ca_12171_v3 Cicer arietinum L. HOM05D005149 ORTHO05D006251 1.3e-37 160.6 170 53.5
Gohir.A11G310500 Gossypium hirsutum HOM05D005149 ORTHO05D006251 1.7e-37 160.2 175 52.6
Glyma.08G228000 Glycine max HOM05D005149 ORTHO05D006251 2.9e-37 159.5 156 54.5
Gorai.006G271200 Gossypium raimondii HOM05D005149 ORTHO05D006251 3.8e-37 159.1 155 54.2
Aqoxy1G01331 Aquilegia oxysepala HOM05D005149 ORTHO05D006251 5.4e-36 155.2 182 48.9
Potri.010G246400 Populus trichocarpa HOM05D005149 ORTHO05D006251 5.4e-36 155.2 169 53.3
Manes.07G084100 Manihot esculenta HOM05D005149 ORTHO05D006251 7.1e-36 154.8 165 53.3
Medtr8g044150 Medicago truncatula HOM05D005149 ORTHO05D006251 7.1e-36 154.8 174 54.6
Duzib106G0431 Durio zibethinus HOM05D005149 ORTHO05D006251 1.2e-35 154.1 161 53.4
THA.LOC104816483 Tarenaya hassleriana HOM05D005149 ORTHO05D006251 1.6e-35 153.7 170 54.1
FAN01G0635 Fragaria x ananassa HOM05D005149 ORTHO05D006251 3.9e-34 149.1 161 52.2
C09p71830 Brassica napus HOM05D005149 ORTHO05D006251 5.1e-34 148.7 142 57.7
BolC9t59932H Brassica oleracea HOM05D005149 ORTHO05D006251 5.1e-34 148.7 142 57.7
FAN12G2325 Fragaria x ananassa HOM05D005149 ORTHO05D006251 5.1e-34 148.7 174 51.7
Nn2g14694 Nelumbo nucifera HOM05D005149 ORTHO05D006251 5.1e-34 148.7 181 47.0
Ciclev10015236m.g Citrus clementina HOM05D005149 ORTHO05D006251 1.1e-33 147.5 164 53.7
Thhalv10013568m.g Eutrema salsugineum HOM05D005149 ORTHO05D006251 1.1e-33 147.5 174 52.9
Hund06827 Selenicereus undatus HOM05D005149 ORTHO05D006251 1.5e-33 147.1 187 47.1
Aa31LG11G5780 Aethionema arabicum HOM05D005149 ORTHO05D006251 1.9e-33 146.7 169 51.5
AT5G04920 Arabidopsis thaliana HOM05D005149 ORTHO05D006251 1.9e-33 146.7 180 50.6
Carub.0006s0386 Capsella rubella HOM05D005149 ORTHO05D006251 2.5e-33 146.4 178 50.6
Sp6g37880 Schrenkiella parvula HOM05D005149 ORTHO05D006251 4.3e-33 145.6 173 52.0
BraA10t45165Z Brassica rapa HOM05D005149 ORTHO05D006251 5.6e-33 145.2 141 55.3
AL6G14620 Arabidopsis lyrata HOM05D005149 ORTHO05D006251 9.6e-33 144.4 180 50.0
Cpa.g.sc54.66 Carica papaya HOM05D005149 ORTHO05D006251 1.3e-32 144.1 161 52.2
A10p31210 Brassica napus HOM05D005149 ORTHO05D006251 1.6e-32 143.7 154 53.2
ATR0068G114 Amborella trichopoda HOM05D005149 ORTHO05D006251 1.4e-31 140.6 169 51.5
Carub.0010s0002 Capsella rubella HOM05D005149 ORTHO05D006251 1.4e-31 140.6 174 50.6
Sc09g0004900 Simmondsia chinensis HOM05D005149 ORTHO05D006251 1.4e-31 140.6 190 46.3
HPP92_019772 Vanilla planifolia HOM05D005149 ORTHO05D006251 1.8e-31 140.2 182 47.3
MBI19_g30303_MAGBIO Magnolia biondii HOM05D005149 ORTHO05D006251 3.4e-30 136.0 187 47.1
CARHR208340 Cardamine hirsuta HOM05D005149 ORTHO05D006251 5.8e-30 135.2 168 51.8
Atru.chr12.1229 Acer truncatum HOM05D005149 ORTHO05D006251 1.9e-28 130.2 150 51.3
SEGI_09620 Sequoiadendron giganteum HOM05D005149 ORTHO05D006251 2.4e-28 129.8 187 41.7
TWI38G0882 Tripterygium wilfordii HOM05D005149 ORTHO05D006251 2.4e-28 129.8 180 48.3
EL10Ac4g08774 Beta vulgaris HOM05D005149 ORTHO05D006251 6.0e-27 125.2 184 44.0
Gohir.D13G182000 Gossypium hirsutum HOM05D005149 ORTHO05D006251 7.9e-27 124.8 155 45.2
AUR62014307 Chenopodium quinoa HOM05D005149 ORTHO05D006251 6.7e-26 121.7 186 43.0
BcaC06g32201 Brassica carinata HOM05D005149 ORTHO05D006251 3.3e-25 119.4 139 51.8
Ah.04g162660 Amaranthus hybridus HOM05D005149 ORTHO05D006251 1.3e-24 117.5 186 44.1
Pp3c23_21630 Physcomitrium patens HOM05D005149 ORTHO05D006251 1.8e-23 113.6 191 38.7
CDE04G0393 Ceratophyllum demersum HOM05D005149 ORTHO05D006251 1.5e-22 110.5 180 40.6
AagrBONN_evm.TU.Sc2ySwM_369.549 Anthoceros agrestis HOM05D005149 ORTHO05D006251 2.6e-22 109.8 148 41.2
BcaB04g17834 Brassica carinata HOM05D005149 ORTHO05D017514 4.2e-20 102.4 104 54.8
Mapoly0072s0023 Marchantia polymorpha HOM05D005149 ORTHO05D006251 1.9e-17 93.6 147 34.0
SHI21243 Sapria himalayana HOM05D005149 ORTHO05D006251 2.5e-17 93.2 165 41.2
AUR62034100 Chenopodium quinoa HOM05D005149 ORTHO05D006251 7.4e-17 91.7 150 43.3
Eucgr.G02641 Eucalyptus grandis HOM05D005149 ORTHO05D006251 1.3e-16 90.9 130 42.3
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 4.0e-15 85.9 170 39.4
Zm00001eb149970 Zea mays HOM05D005149 ORTHO05D006251 7.6e-14 81.6 193 36.3
Os01g0813500 Oryza sativa ssp. japonica HOM05D005149 ORTHO05D006251 1.3e-13 80.9 196 34.2
SMO011G0007 Selaginella moellendorffii HOM05D005149 ORTHO05D006251 1.6e-11 73.9 189 34.4
CDE02G4629 Ceratophyllum demersum HOM05D005149 ORTHO05D006251 6.1e-11 72.0 165 33.3
CAN.G134.53 Capsicum annuum HOM05D005149 ORTHO05D006251 3.9e-10 69.3 90 51.1
Sabra08G0007600 Salix brachista HOM05D005149 ORTHO05D006251 8.2e-08 61.6 78 44.9
BcaB01g02418 Brassica carinata HOM05D005149 ORTHO05D006251 1.5e-06 57.4 72 43.1
CBR_g40666 Chara braunii HOM05D005149 ORTHO05D006251 1.0e-05 54.7 210 27.1


User provided reference genes

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