Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00959 Erythranthe guttata HOM05D007300 ORTHO05D009301 0.0e+00 1276.5 658 100.0
SalBow8G1735 Salvia bowleyana HOM05D007300 ORTHO05D009301 2.0e-238 829.3 611 69.4
SGA_v2.0_scaffold1G00132 Striga asiatica HOM05D007300 ORTHO05D009301 5.0e-229 798.1 663 64.3
Oeu021524.1 Olea europaea HOM05D007300 ORTHO05D009301 5.0e-221 771.5 605 65.6
Dinv32299 Davidia involucrata HOM05D007300 ORTHO05D009301 9.0e-194 681.0 671 56.9
Nitab4.5_0003714g0040 Nicotiana tabacum HOM05D007300 ORTHO05D009301 2.9e-192 676.0 665 55.2
Nitab4.5_0001283g0060 Nicotiana tabacum HOM05D007300 ORTHO05D009301 6.4e-192 674.9 665 55.6
PGSC0003DMG400003073 Solanum tuberosum HOM05D007300 ORTHO05D009301 2.4e-186 656.4 656 55.5
Peaxi162Scf00649g00027 Petunia axillaris HOM05D007300 ORTHO05D009301 9.0e-186 654.4 602 57.5
CAN.G257.51 Capsicum annuum HOM05D007300 ORTHO05D009301 1.5e-185 653.7 671 53.8
Actinidia19486 Actinidia chinensis HOM05D007300 ORTHO05D009301 2.6e-185 652.9 684 54.2
TAR627G1006 Trochodendron aralioides HOM05D007300 ORTHO05D009301 4.5e-185 652.1 608 57.1
Solyc02g071280.3 Solanum lycopersicum HOM05D007300 ORTHO05D009301 7.6e-185 651.4 665 54.0
CSS0020184 Camellia sinensis var. sinensis HOM05D007300 ORTHO05D009301 1.3e-184 650.6 674 52.8
Sopen02g020340 Solanum pennellii HOM05D007300 ORTHO05D009301 8.4e-184 647.9 665 54.1
GSVIVG01021378001 Vitis vinifera HOM05D007300 ORTHO05D009301 5.6e-180 635.2 675 53.2
CiPaw.10G096200 Carya illinoinensis HOM05D007300 ORTHO05D009301 1.5e-177 627.1 669 52.0
Thecc.06G157700 Theobroma cacao HOM05D007300 ORTHO05D009301 2.7e-174 616.3 687 50.7
Cfa001024 Carpinus fangiana HOM05D007300 ORTHO05D009301 1.8e-173 613.6 686 52.0
Prupe.4G073700 Prunus persica HOM05D007300 ORTHO05D009301 3.3e-172 609.4 680 50.4
QL05p060322 Quercus lobata HOM05D007300 ORTHO05D009301 3.3e-172 609.4 679 51.7
Gohir.A10G037600 Gossypium hirsutum HOM05D007300 ORTHO05D009301 1.4e-170 604.0 684 51.6
Gohir.D10G038600 Gossypium hirsutum HOM05D007300 ORTHO05D009301 5.3e-170 602.1 689 50.9
HanXRQChr04g0119571 Helianthus annuus HOM05D007300 ORTHO05D009301 9.0e-170 601.3 660 51.1
Gorai.011G040700 Gossypium raimondii HOM05D007300 ORTHO05D009301 1.5e-169 600.5 690 50.9
MD05G1291800 Malus domestica HOM05D007300 ORTHO05D009301 2.6e-169 599.7 703 49.9
RcHm_v2.0_Chr5g0012901 Rosa chinensis HOM05D007300 ORTHO05D009301 2.6e-169 599.7 676 51.2
TWI73G0852 Tripterygium wilfordii HOM05D007300 ORTHO05D009301 6.5e-168 595.1 686 49.6
ClCG03G007190 Citrullus lanatus HOM05D007300 ORTHO05D009301 3.2e-167 592.8 601 52.9
Potri.001G353800 Populus trichocarpa HOM05D007300 ORTHO05D009301 7.2e-167 591.7 607 53.7
Cpa.g.sc17.110 Carica papaya HOM05D007300 ORTHO05D009301 1.2e-166 590.9 654 51.5
Lj1C1181T32 Lonicera japonica HOM05D007300 ORTHO05D009301 1.3e-165 587.4 665 50.2
FvH4_3g06410 Fragaria vesca HOM05D007300 ORTHO05D009301 3.0e-165 586.3 668 50.3
ECA236G2360 Erigeron canadensis HOM05D007300 ORTHO05D009301 3.9e-165 585.9 661 51.3
FAN21G2574 Fragaria x ananassa HOM05D007300 ORTHO05D009301 5.1e-165 585.5 672 49.6
Lsat_1_v5_gn_7_31040 Lactuca sativa HOM05D007300 ORTHO05D009301 6.7e-165 585.1 649 51.2
CANSAT35G1474 Cannabis sativa HOM05D007300 ORTHO05D009301 3.1e-162 576.2 688 50.7
Ciclev10014510m.g Citrus clementina HOM05D007300 ORTHO05D009301 9.0e-162 574.7 670 49.3
CsaV3_1G032780 Cucumis sativus L. HOM05D007300 ORTHO05D009301 1.2e-161 574.3 600 52.3
Sabra16G0232700 Salix brachista HOM05D007300 ORTHO05D009301 4.5e-161 572.4 690 48.3
Aqoxy1G01857 Aquilegia oxysepala HOM05D007300 ORTHO05D009301 5.9e-161 572.0 680 49.7
MBI10_g02388_MAGBIO Magnolia biondii HOM05D007300 ORTHO05D009301 7.7e-161 571.6 674 47.6
Manes.17G064900 Manihot esculenta HOM05D007300 ORTHO05D009301 7.7e-161 571.6 607 51.1
Lalb_Chr13g0295471 Lupinus albus HOM05D007300 ORTHO05D009301 8.5e-160 568.2 644 49.7
Medtr8g088030 Medicago truncatula HOM05D007300 ORTHO05D009301 8.5e-160 568.2 606 50.3
arahy.Tifrunner.gnm1.ann1.D64P8M Arachis hypogaea HOM05D007300 ORTHO05D009301 2.5e-159 566.6 661 49.3
Glyma.08G121900 Glycine max HOM05D007300 ORTHO05D009301 2.5e-159 566.6 655 49.2
Atru.chr10.1407 Acer truncatum HOM05D007300 ORTHO05D009301 5.5e-159 565.5 559 54.4
DCAR_027959 Daucus carota HOM05D007300 ORTHO05D009301 5.5e-159 565.5 606 51.7
Haze_05485 Corylus avellana HOM05D007300 ORTHO05D009301 7.2e-159 565.1 783 45.5
Glyma.05G164500 Glycine max HOM05D007300 ORTHO05D009301 7.2e-159 565.1 668 48.1
COL.COLO4_22798 Corchorus olitorius HOM05D007300 ORTHO05D009301 9.4e-159 564.7 682 49.4
arahy.Tifrunner.gnm1.ann1.FQ35JE Arachis hypogaea HOM05D007300 ORTHO05D009301 2.7e-158 563.1 673 48.4
Lj4g0024386 Lotus japonicus HOM05D007300 ORTHO05D009301 3.6e-158 562.8 650 49.1
Eucgr.D00343 Eucalyptus grandis HOM05D007300 ORTHO05D009301 4.6e-158 562.4 683 48.0
FAN11G2841 Fragaria x ananassa HOM05D007300 ORTHO05D009301 4.6e-158 562.4 729 46.5
Atru.chr10.1398 Acer truncatum HOM05D007300 ORTHO05D009301 3.9e-157 559.3 560 54.3
PSO541G4163 Papaver somniferum HOM05D007300 ORTHO05D009301 2.5e-156 556.6 598 49.0
Thhalv10000812m.g Eutrema salsugineum HOM05D007300 ORTHO05D009301 3.4e-153 546.2 669 45.9
Sc05g0006590 Simmondsia chinensis HOM05D007300 ORTHO05D009301 1.0e-152 544.7 677 46.4
Phvul.002G244500 Phaseolus vulgaris HOM05D007300 ORTHO05D009301 1.7e-152 543.9 661 48.3
Ca_17871_v3 Cicer arietinum L. HOM05D007300 ORTHO05D009301 2.2e-152 543.5 667 46.9
TPR.G6793 Trifolium pratense HOM05D007300 ORTHO05D009301 2.9e-152 543.1 660 47.1
Sp2g11270 Schrenkiella parvula HOM05D007300 ORTHO05D009301 3.2e-151 539.7 674 46.7
CARHR175340 Cardamine hirsuta HOM05D007300 ORTHO05D009301 9.4e-151 538.1 669 46.2
Carub.0008s0147 Capsella rubella HOM05D007300 ORTHO05D009301 1.4e-149 534.3 670 45.5
Nn3g20905 Nelumbo nucifera HOM05D007300 ORTHO05D009301 2.3e-149 533.5 625 49.4
C07p29650 Brassica napus HOM05D007300 ORTHO05D009301 1.5e-148 530.8 664 46.5
AUR62027555 Chenopodium quinoa HOM05D007300 ORTHO05D009301 2.0e-148 530.4 607 47.8
VMungo0251G3397 Vigna mungo HOM05D007300 ORTHO05D009301 2.0e-148 530.4 573 51.7
BolC7t43517H Brassica oleracea HOM05D007300 ORTHO05D009301 5.7e-148 528.9 670 46.4
Aa31LG9G6430 Aethionema arabicum HOM05D007300 ORTHO05D009301 2.2e-147 526.9 680 45.4
AL8G11990 Arabidopsis lyrata HOM05D007300 ORTHO05D009301 2.8e-147 526.6 674 45.7
AT5G46420 Arabidopsis thaliana HOM05D007300 ORTHO05D009301 3.7e-147 526.2 663 46.3
A06p45940 Brassica napus HOM05D007300 ORTHO05D009301 6.3e-147 525.4 675 45.8
THA.LOC104827733 Tarenaya hassleriana HOM05D007300 ORTHO05D009301 6.3e-147 525.4 679 45.7
Duzib235G1110 Durio zibethinus HOM05D007300 ORTHO05D009301 1.6e-145 520.8 681 45.7
BraA06t27457Z Brassica rapa HOM05D007300 ORTHO05D009301 4.5e-145 519.2 657 46.7
Psat7g066760 Pisum sativum HOM05D007300 ORTHO05D009301 5.0e-144 515.8 696 44.1
AUR62035801 Chenopodium quinoa HOM05D007300 ORTHO05D009301 6.5e-144 515.4 600 47.2
PGR044G1273 Punica granatum HOM05D007300 ORTHO05D009301 2.0e-140 503.8 553 50.3
unitig_92.g28150 Utricularia gibba HOM05D007300 ORTHO05D009301 1.3e-139 501.1 612 49.0
EL10Ac8g19794 Beta vulgaris HOM05D007300 ORTHO05D009301 1.8e-125 454.1 674 42.0
HPP92_023296 Vanilla planifolia HOM05D007300 ORTHO05D009301 2.7e-121 440.3 679 40.5
ATR1153G036 Amborella trichopoda HOM05D007300 ORTHO05D009301 3.6e-118 429.9 612 40.8
FAN16G1565 Fragaria x ananassa HOM05D007300 ORTHO05D009301 2.6e-116 423.7 476 50.6
Sed0024786 Sechium edule HOM05D007300 ORTHO05D009301 8.9e-101 372.1 353 56.9
PSO675G3105 Papaver somniferum HOM05D007300 ORTHO05D009301 2.9e-99 367.1 355 54.4
SEGI_38698 Sequoiadendron giganteum HOM05D007300 ORTHO05D009301 4.0e-93 346.7 754 32.6
HPP92_023271 Vanilla planifolia HOM05D007300 ORTHO05D009301 3.5e-81 307.0 676 33.0
Zm00001eb296050 Zea mays HOM05D007300 ORTHO05D009301 2.3e-72 277.7 332 45.5
MELO3C002704.2 Cucumis melo HOM05D007300 ORTHO05D009301 1.3e-70 271.9 358 44.7
Pp3c15_14250 Physcomitrium patens HOM05D007300 ORTHO05D009301 6.2e-70 269.6 551 31.9
CDE06G2820 Ceratophyllum demersum HOM05D007300 ORTHO05D009301 9.0e-69 265.8 396 43.2
Mapoly0019s0078 Marchantia polymorpha HOM05D007300 ORTHO05D009301 3.4e-68 263.8 707 27.9
AagrBONN_evm.TU.Sc2ySwM_228.1844 Anthoceros agrestis HOM05D007300 ORTHO05D004905 1.2e-65 255.4 551 31.9
Os05g0566300 Oryza sativa ssp. japonica HOM05D007300 ORTHO05D009301 1.6e-54 218.4 291 43.6
Zm00001eb349440 Zea mays HOM05D007300 ORTHO05D009301 3.6e-41 174.1 176 49.4
SEGI_17563 Sequoiadendron giganteum HOM05D007300 ORTHO05D009301 7.9e-33 146.4 214 41.1
Gorai.004G093400 Gossypium raimondii HOM05D007300 ORTHO05D009301 5.2e-32 143.7 128 53.9
Gohir.D08G088700 Gossypium hirsutum HOM05D007300 ORTHO05D009301 2.0e-31 141.7 128 53.9
MCO05G669 Micromonas commoda HOM05D007300 ORTHO05D009301 3.0e-24 117.9 228 32.0
Cre03.g191950 Chlamydomonas reinhardtii HOM05D007300 ORTHO05D009301 2.9e-19 101.3 209 32.5
Zm00001eb184690 Zea mays HOM05D007300 ORTHO05D009301 4.0e-16 90.9 83 47.0
CDE06G1765 Ceratophyllum demersum HOM05D007300 ORTHO05D009301 2.6e-15 88.2 156 32.1
Pp3c4_17200 Physcomitrium patens HOM05D003927 ORTHO05D004905 2.4e-13 81.6 317 23.7


User provided reference genes

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