Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00629 Erythranthe guttata HOM05D000810 ORTHO05D003737 1.3e-62 243.0 136 100.0
Migut.B01090 Erythranthe guttata HOM05D000810 ORTHO05D003737 1.9e-45 186.0 109 96.3
Migut.C00333 Erythranthe guttata HOM05D000810 ORTHO05D003737 2.1e-44 182.6 114 81.6
Migut.I01203 Erythranthe guttata HOM05D000810 ORTHO05D003737 1.2e-31 140.2 114 78.9
Hma1.2p1_0517F.1_g170840 Hydrangea macrophylla HOM05D000810 ORTHO05D003737 1.8e-27 126.3 112 62.5
Potri.008G004300 Populus trichocarpa HOM05D000810 ORTHO05D003737 3.0e-27 125.6 124 58.1
Migut.L00015 Erythranthe guttata HOM05D000810 ORTHO05D003737 8.7e-27 124.0 80 80.0
TAR636G3620 Trochodendron aralioides HOM05D000810 ORTHO05D003737 8.7e-27 124.0 105 63.8
FAN12G2318 Fragaria x ananassa HOM05D000810 ORTHO05D003737 1.3e-25 120.2 114 59.6
GSVIVG01029553001 Vitis vinifera HOM05D000810 ORTHO05D003737 1.6e-25 119.8 108 63.0
Aqoxy7G02728 Aquilegia oxysepala HOM05D000810 ORTHO05D003737 2.2e-25 119.4 114 58.8
FAN22G1110 Fragaria x ananassa HOM05D000810 ORTHO05D003737 4.1e-24 115.2 114 58.8
Lj6g0014025 Lotus japonicus HOM05D000810 ORTHO05D003737 5.3e-24 114.8 114 58.8
EL10Ac8g18318 Beta vulgaris HOM05D000810 ORTHO05D003737 4.5e-23 111.7 107 57.0
MSTRG.10873 Avicennia marina HOM05D000810 ORTHO05D003737 5.9e-23 111.3 114 66.7
Hund18592 Selenicereus undatus HOM05D000810 ORTHO05D003737 5.9e-23 111.3 109 52.3
HanXRQChr06g0179571 Helianthus annuus HOM05D000810 ORTHO05D003737 1.3e-22 110.2 103 55.3
QL05p088870 Quercus lobata HOM05D000810 ORTHO05D003737 2.9e-22 109.0 114 65.8
Lj8A573G8 Lonicera japonica HOM05D000810 ORTHO05D003737 5.0e-22 108.2 103 55.3
Migut.J00818 Erythranthe guttata HOM05D000810 ORTHO05D003737 6.5e-22 107.8 108 57.4
Hma1.2p1_0022F.1_g014710 Hydrangea macrophylla HOM05D000810 ORTHO05D003737 8.5e-22 107.5 114 55.3
AUR62021332 Chenopodium quinoa HOM05D000810 ORTHO05D003737 1.4e-21 106.7 107 55.1
AUR62033247 Chenopodium quinoa HOM05D000810 ORTHO05D003737 1.4e-21 106.7 107 55.1
Dinv20332 Davidia involucrata HOM05D000810 ORTHO05D003737 1.9e-21 106.3 114 64.0
Cfa003438 Carpinus fangiana HOM05D000810 ORTHO05D003737 3.2e-21 105.5 114 64.0
ECA236G4575 Erigeron canadensis HOM05D000810 ORTHO05D003737 3.2e-21 105.5 103 52.4
Ah.08g217800 Amaranthus hybridus HOM05D000810 ORTHO05D003737 4.2e-21 105.1 105 51.4
CiPaw.01G208700 Carya illinoinensis HOM05D000810 ORTHO05D003737 5.5e-21 104.8 114 64.0
Rhsim13G0078100 Rhododendron simsii HOM05D000810 ORTHO05D001064 5.5e-21 104.8 114 51.8
Os08g0519800 Oryza sativa ssp. japonica HOM05D000810 ORTHO05D003737 7.2e-21 104.4 114 50.9
Lsat_1_v5_gn_7_56480 Lactuca sativa HOM05D000810 ORTHO05D003737 9.4e-21 104.0 95 58.9
Dinv26444 Davidia involucrata HOM05D000810 ORTHO05D003737 1.2e-20 103.6 114 64.0
Sabra15G0073700 Salix brachista HOM05D000810 ORTHO05D005618 1.2e-20 103.6 112 54.5
vmacro03039 Vaccinium macrocarpon HOM05D000810 ORTHO05D001064 1.2e-20 103.6 111 53.2
MSTRG.19385 Avicennia marina HOM05D000810 ORTHO05D003737 2.1e-20 102.8 114 52.6
Duzib114G0626 Durio zibethinus HOM05D000810 ORTHO05D001064 2.7e-20 102.4 114 50.9
Zm00001eb174630 Zea mays HOM05D000810 ORTHO05D003737 2.7e-20 102.4 114 50.0
FvH4_4g07600 Fragaria vesca HOM05D000810 ORTHO05D003737 3.6e-20 102.1 114 63.2
HanXRQChr05g0140941 Helianthus annuus HOM05D000810 ORTHO05D003737 4.6e-20 101.7 97 53.6
Lsat_1_v5_gn_8_69540 Lactuca sativa HOM05D000810 ORTHO05D003737 6.1e-20 101.3 80 61.2
Hund18893 Selenicereus undatus HOM05D000810 ORTHO05D001064 6.1e-20 101.3 111 52.3
EL10Ac7g18152 Beta vulgaris HOM05D000810 ORTHO05D003737 7.9e-20 100.9 103 46.6
Os09g0497100 Oryza sativa ssp. japonica HOM05D000810 ORTHO05D003737 1.0e-19 100.5 103 49.5
AUR62025670 Chenopodium quinoa HOM05D000810 ORTHO05D003737 1.4e-19 100.1 95 54.7
Sabra08G0001900 Salix brachista HOM05D000810 ORTHO05D003737 1.4e-19 100.1 114 63.2
Cpa.g.sc1.431 Carica papaya HOM05D000810 ORTHO05D001064 1.8e-19 99.8 117 49.6
Solyc11g008490.3 Solanum lycopersicum HOM05D000810 ORTHO05D001064 1.8e-19 99.8 114 49.1
Sopen11g004270 Solanum pennellii HOM05D000810 ORTHO05D001064 1.8e-19 99.8 114 49.1
PGSC0003DMG401007428 Solanum tuberosum HOM05D000810 ORTHO05D001064 1.8e-19 99.8 114 49.1
SGA_v2.0_scaffold46G17347 Striga asiatica HOM05D000810 ORTHO05D003737 2.3e-19 99.4 112 50.9
CAN.G321.36 Capsicum annuum HOM05D000810 ORTHO05D001064 6.7e-19 97.8 114 49.1
AUR62001335 Chenopodium quinoa HOM05D000810 ORTHO05D003737 6.7e-19 97.8 95 53.7
Atru.chr1.2653_Atru.chr1.2654 Acer truncatum HOM05D000810 ORTHO05D003737 1.1e-18 97.1 71 70.4
Potri.006G165100 Populus trichocarpa HOM05D000810 ORTHO05D003737 1.5e-18 96.7 97 57.7
Sc14g0001380 Simmondsia chinensis HOM05D000810 ORTHO05D003737 1.5e-18 96.7 104 54.8
unitig_26.g9139 Utricularia gibba HOM05D000810 ORTHO05D003737 1.9e-18 96.3 103 49.5
RcHm_v2.0_Chr4g0400221 Rosa chinensis HOM05D000810 ORTHO05D003737 4.3e-18 95.1 110 64.5
A01p34410 Brassica napus HOM05D000810 ORTHO05D003737 7.4e-18 94.4 76 61.8
CANSAT01G1333 Cannabis sativa HOM05D000810 ORTHO05D003737 1.3e-17 93.6 114 60.5
Carub.0007s1507 Capsella rubella HOM05D000810 ORTHO05D003737 1.3e-17 93.6 114 46.5
FAN10G0195 Fragaria x ananassa HOM05D000810 ORTHO05D001064 1.7e-17 93.2 106 50.9
SEGI_34780 Sequoiadendron giganteum HOM05D000810 ORTHO05D001064 1.7e-17 93.2 112 50.9
AL7G27130 Arabidopsis lyrata HOM05D000810 ORTHO05D003737 2.2e-17 92.8 114 45.6
AUR62012123 Chenopodium quinoa HOM05D000810 ORTHO05D001064 2.8e-17 92.4 106 51.9
AUR62040713 Chenopodium quinoa HOM05D000810 ORTHO05D001064 2.8e-17 92.4 106 51.9
Sabra08G0024600 Salix brachista HOM05D000810 ORTHO05D001064 2.8e-17 92.4 111 49.5
THA.LOC104817845 Tarenaya hassleriana HOM05D000810 ORTHO05D003737 2.8e-17 92.4 72 62.5
A01p17140 Brassica napus HOM05D000810 ORTHO05D003737 3.7e-17 92.0 114 45.6
BraA01t01670Z Brassica rapa HOM05D000810 ORTHO05D003737 3.7e-17 92.0 114 45.6
Haze_21978 Corylus avellana HOM05D000810 ORTHO05D003737 3.7e-17 92.0 72 68.1
FvH4_7g22880 Fragaria vesca HOM05D000810 ORTHO05D001064 3.7e-17 92.0 106 50.9
FAN01G0522 Fragaria x ananassa HOM05D000810 ORTHO05D001064 3.7e-17 92.0 106 50.9
FAN01G0641 Fragaria x ananassa HOM05D000810 ORTHO05D001064 3.7e-17 92.0 106 50.9
FAN03G1258 Fragaria x ananassa HOM05D000810 ORTHO05D001064 3.7e-17 92.0 106 50.9
FAN06G0319 Fragaria x ananassa HOM05D000810 ORTHO05D001064 3.7e-17 92.0 106 50.9
FAN06G1800 Fragaria x ananassa HOM05D000810 ORTHO05D001064 3.7e-17 92.0 106 50.9
RcHm_v2.0_Chr1g0368031 Rosa chinensis HOM05D000810 ORTHO05D001064 3.7e-17 92.0 106 50.9
ATR0626G013 Amborella trichopoda HOM05D000810 ORTHO05D003737 4.8e-17 91.7 71 63.4
C01p21470 Brassica napus HOM05D000810 ORTHO05D003737 4.8e-17 91.7 114 44.7
BolC1t02067H Brassica oleracea HOM05D000810 ORTHO05D003737 4.8e-17 91.7 114 44.7
Actinidia23923 Actinidia chinensis HOM05D000810 ORTHO05D001064 8.2e-17 90.9 111 59.5
MBI05_g29681_MAGBIO Magnolia biondii HOM05D000810 ORTHO05D001064 8.2e-17 90.9 106 50.0
AT4G25880 Arabidopsis thaliana HOM05D000810 ORTHO05D003737 1.8e-16 89.7 114 45.6
THA.LOC104810041 Tarenaya hassleriana HOM05D000810 ORTHO05D001064 2.4e-16 89.4 98 50.0
Haze_16184 Corylus avellana HOM05D000810 ORTHO05D003737 3.1e-16 89.0 66 66.7
ECA240G3975 Erigeron canadensis HOM05D000810 ORTHO05D003737 5.3e-16 88.2 74 58.1
Oeu049629.1 Olea europaea HOM05D000810 ORTHO05D003737 5.3e-16 88.2 114 58.8
Haze_24147 Corylus avellana HOM05D000810 ORTHO05D001064 1.5e-15 86.7 149 40.3
Lj7A117T16 Lonicera japonica HOM05D000810 ORTHO05D001064 2.0e-15 86.3 76 59.2
Dinv25403 Davidia involucrata HOM05D000810 ORTHO05D003737 2.6e-15 85.9 114 57.9
Lj9A543G60 Lonicera japonica HOM05D000810 ORTHO05D003737 2.2e-14 82.8 68 63.2
Ah.08g219910 Amaranthus hybridus HOM05D000810 ORTHO05D001064 3.8e-14 82.0 70 61.4
Sabra15G0049700 Salix brachista HOM05D000810 ORTHO05D003737 3.8e-14 82.0 68 61.8
CARHR007260 Cardamine hirsuta HOM05D000810 ORTHO05D001064 6.5e-14 81.3 112 55.4
Hund26319 Selenicereus undatus HOM05D000810 ORTHO05D003737 6.5e-14 81.3 107 45.8
CAN.G790.11 Capsicum annuum HOM05D000810 ORTHO05D003737 8.5e-14 80.9 114 55.3
Sc12g0011200 Simmondsia chinensis HOM05D000810 ORTHO05D003737 1.4e-13 80.1 73 56.2
CARHR233350 Cardamine hirsuta HOM05D000810 ORTHO05D003737 1.9e-13 79.7 114 42.1
FAN14G0087 Fragaria x ananassa HOM05D000810 ORTHO05D003737 1.9e-13 79.7 114 55.3
TAR625G0768 Trochodendron aralioides HOM05D000810 ORTHO05D003737 3.2e-13 79.0 119 42.9
Aa31LG3G270 Aethionema arabicum HOM05D000810 ORTHO05D003737 7.2e-13 77.8 114 41.2
CAN.G962.8 Capsicum annuum HOM05D003632 ORTHO05D001064 1.2e-12 77.0 58 65.5
Oeu002435.1 Olea europaea HOM05D000810 ORTHO05D001064 1.6e-12 76.6 86 50.0
Manes.07G095500 Manihot esculenta HOM05D000810 ORTHO05D001064 2.1e-12 76.3 95 47.4
Actinidia21890 Actinidia chinensis HOM05D000810 ORTHO05D003737 2.7e-12 75.9 114 52.6
MBI05_g35625_MAGBIO Magnolia biondii HOM05D000810 ORTHO05D001064 7.9e-12 74.3 86 48.8
ClCG02G019970 Citrullus lanatus HOM05D000810 ORTHO05D001064 1.0e-11 73.9 86 48.8
ClCG05G021150 Citrullus lanatus HOM05D000810 ORTHO05D001064 1.0e-11 73.9 80 50.0
Peaxi162Scf00296g00722 Petunia axillaris HOM05D000810 ORTHO05D001064 1.8e-11 73.2 114 38.6
Nitab4.5_0000819g0060 Nicotiana tabacum HOM05D000810 ORTHO05D001064 8.8e-11 70.9 114 39.5
Nitab4.5_0000751g0070 Nicotiana tabacum HOM05D000810 ORTHO05D001064 2.0e-10 69.7 69 50.7
BcaC09g48976 Brassica carinata HOM05D000810 ORTHO05D003737 2.6e-10 69.3 51 62.7
C01p43860 Brassica napus HOM05D000810 ORTHO05D003737 2.6e-10 69.3 51 62.7
BolC1t04342H Brassica oleracea HOM05D000810 ORTHO05D003737 2.6e-10 69.3 51 62.7
Nitab4.5_0006561g0050 Nicotiana tabacum HOM05D000810 ORTHO05D001064 3.3e-10 68.9 114 39.5
Peaxi162Scf00253g00515 Petunia axillaris HOM05D000810 ORTHO05D001064 3.3e-10 68.9 114 39.5
Haze_16846 Corylus avellana HOM05D000810 ORTHO05D001064 5.7e-10 68.2 106 43.4
SMO347G0433 Selaginella moellendorffii HOM05D000810 ORTHO05D001064 5.7e-10 68.2 101 43.6
FAN02G1409 Fragaria x ananassa HOM05D000810 ORTHO05D003737 9.7e-10 67.4 114 46.5
FAN09G0580 Fragaria x ananassa HOM05D000810 ORTHO05D003737 9.7e-10 67.4 114 46.5
Sopen03g041720 Solanum pennellii HOM05D000810 ORTHO05D003737 1.7e-09 66.6 114 50.0
BraA01t03538Z Brassica rapa HOM05D000810 ORTHO05D003737 2.2e-09 66.2 51 60.8
Rhsim08G0250700 Rhododendron simsii HOM05D000810 ORTHO05D003737 2.8e-09 65.9 114 51.8
TWI63G0404 Tripterygium wilfordii HOM05D000810 ORTHO05D003737 2.8e-09 65.9 114 41.2
BcaC01g03573 Brassica carinata HOM05D000810 ORTHO05D003737 3.7e-09 65.5 51 60.8
Rhsim07G0135200 Rhododendron simsii HOM05D000810 ORTHO05D001064 3.7e-09 65.5 87 46.0
Prupe.3G023300 Prunus persica HOM05D000810 ORTHO05D003737 4.8e-09 65.1 114 39.5
A03p56320 Brassica napus HOM05D000810 ORTHO05D003737 6.3e-09 64.7 114 37.7
C07p54560 Brassica napus HOM05D000810 ORTHO05D003737 6.3e-09 64.7 114 37.7
BolC7t45944H Brassica oleracea HOM05D000810 ORTHO05D003737 6.3e-09 64.7 114 37.7
BraA03t14702Z Brassica rapa HOM05D000810 ORTHO05D003737 6.3e-09 64.7 114 37.7
CAN.G244.19 Capsicum annuum HOM05D008672 ORTHO05D010998 1.1e-08 63.9 69 50.7
COL.COLO4_31145 Corchorus olitorius HOM05D000810 ORTHO05D003737 1.4e-08 63.5 114 48.2
Lj7A121T9 Lonicera japonica HOM05D000810 ORTHO05D001064 1.4e-08 63.5 51 58.8
Manes.06G179701 Manihot esculenta HOM05D000810 ORTHO05D003737 1.4e-08 63.5 114 49.1
Zm00001eb301130 Zea mays HOM05D000810 ORTHO05D003737 3.1e-08 62.4 84 38.1
Cre17.g746647 Chlamydomonas reinhardtii HOM05D000810 ORTHO05D001064 4.1e-08 62.0 129 35.7
Medtr2g036900 Medicago truncatula HOM05D000810 ORTHO05D003737 4.1e-08 62.0 114 38.6
HanXRQChr03g0068341 Helianthus annuus HOM05D000810 ORTHO05D003737 5.3e-08 61.6 103 38.8
Solyc03g123980.4 Solanum lycopersicum HOM05D000810 ORTHO05D003737 7.0e-08 61.2 114 48.2
MELO3C026713.2 Cucumis melo HOM05D000810 ORTHO05D003737 9.1e-08 60.8 114 39.5
CsaV3_3G030470 Cucumis sativus L. HOM05D000810 ORTHO05D003737 9.1e-08 60.8 114 39.5
GSVIVG01031557001 Vitis vinifera HOM05D000810 ORTHO05D003737 9.1e-08 60.8 119 36.1
Thecc.09G181000 Theobroma cacao HOM05D000810 ORTHO05D003737 1.2e-07 60.5 114 39.5
ClCG07G014670 Citrullus lanatus HOM05D000810 ORTHO05D003737 2.0e-07 59.7 114 39.5
Potri.003G009900 Populus trichocarpa HOM05D000810 ORTHO05D003737 2.6e-07 59.3 114 38.6
Pp3c3_36940 Physcomitrium patens HOM05D000810 ORTHO05D001064 4.5e-07 58.5 101 41.6
Pp3c3_36960 Physcomitrium patens HOM05D000810 ORTHO05D001064 4.5e-07 58.5 101 41.6
Nn8g40980 Nelumbo nucifera HOM05D000810 ORTHO05D003737 5.9e-07 58.2 114 45.6
Mapoly0051s0008 Marchantia polymorpha HOM05D000810 ORTHO05D001064 1.0e-06 57.4 114 36.8
CDE06G1474 Ceratophyllum demersum HOM05D000810 ORTHO05D001064 1.3e-06 57.0 114 35.1
Ciclev10030613m.g Citrus clementina HOM05D000810 ORTHO05D003737 1.3e-06 57.0 114 47.4
Peaxi162Scf00038g02643 Petunia axillaris HOM05D000810 ORTHO05D003737 1.3e-06 57.0 114 47.4
PGR142G0995 Punica granatum HOM05D000810 ORTHO05D001064 2.2e-06 56.2 103 34.0
arahy.Tifrunner.gnm1.ann1.M6FCCP Arachis hypogaea HOM05D000810 ORTHO05D001064 2.9e-06 55.8 114 35.1
Lsat_1_v5_gn_1_119501 Lactuca sativa HOM05D000810 ORTHO05D001064 2.9e-06 55.8 85 37.6
PGSC0003DMG400009166 Solanum tuberosum HOM05D000810 ORTHO05D003737 2.9e-06 55.8 73 43.8
Oeu064536.1 Olea europaea HOM05D000810 ORTHO05D003737 3.8e-06 55.5 114 36.0
Phvul.009G237900 Phaseolus vulgaris HOM05D000810 ORTHO05D003737 5.0e-06 55.1 114 35.1
Aqoxy2G02286 Aquilegia oxysepala HOM05D000810 ORTHO05D001064 6.5e-06 54.7 114 34.2
PSO063G3242 Papaver somniferum HOM05D000810 ORTHO05D001064 6.5e-06 54.7 114 35.1
PSO339G3390 Papaver somniferum HOM05D000810 ORTHO05D001064 6.5e-06 54.7 114 35.1
PGR102G1419 Punica granatum HOM05D000810 ORTHO05D003737 6.5e-06 54.7 71 45.1
HPP92_015166 Vanilla planifolia HOM05D000810 ORTHO05D001064 6.5e-06 54.7 114 35.1
Actinidia38811 Actinidia chinensis HOM05D000810 ORTHO05D003737 8.5e-06 54.3 114 47.4
TPR.G9021 Trifolium pratense HOM05D000810 ORTHO05D003737 8.5e-06 54.3 131 35.1
VMungo1309G1597 Vigna mungo HOM05D000810 ORTHO05D003737 8.5e-06 54.3 114 35.1


User provided reference genes

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