Gene: Sopen11g004270
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g004270
- Transcript Identifier Sopen11g004270.1
- Gene Type Coding gene
- Location Spenn-ch11 : 2735782-2740885 : positive
Gene Family Information
- ID HOM05D000810
- #Genes/#Species 729/97
- Phylogenetic origin
- ID ORTHO05D001064
- #Genes/#Species 503/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen11g004270.1
Descriptions
- Description Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 UTR of target mRNA transcripts. | pumilio 1 (PUM1) | FUNCTIONS IN: RNA binding, binding | LOCATED IN: cellular_component unknown | EXPRESSED IN: cultured cell | CONTAINS InterPro DOMAIN/s: Nucleic acid binding NABP , Pumilio RNA-binding repeat , Armadillo-like helical , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: pumilio 3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003723 | IEA | InterPro | RNA binding | |
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G10360 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |