Gene: Sopen11g004270

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g004270
  • Transcript Identifier Sopen11g004270.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 2735782-2740885 : positive

Gene Family Information

  • ID HOM05D000810
  • #Genes/#Species 729/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g004270.1

Descriptions

  • Description Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 UTR of target mRNA transcripts. | pumilio 1 (PUM1) | FUNCTIONS IN: RNA binding, binding | LOCATED IN: cellular_component unknown | EXPRESSED IN: cultured cell | CONTAINS InterPro DOMAIN/s: Nucleic acid binding NABP , Pumilio RNA-binding repeat , Armadillo-like helical , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: pumilio 3
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G10360

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR011989 Armadillo-like helical
IPR001313 Pumilio RNA-binding repeat
IPR016024 Armadillo-type fold
IPR033712 Pumilio, RNA binding domain
IPR012940 Nucleic acid binding NABP
Mapman id Description
35.1 not assigned.annotated