Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L01609 Erythranthe guttata HOM05D007201 ORTHO05D009122 1.8e-151 539.3 288 100.0
SGA_v2.0_scaffold21G09583 Striga asiatica HOM05D007201 ORTHO05D009122 4.0e-53 212.6 436 41.7
Rhsim03G0269700 Rhododendron simsii HOM05D007201 ORTHO05D009122 3.8e-40 169.5 383 37.6
Haze_21242 Corylus avellana HOM05D007201 ORTHO05D009122 8.5e-40 168.3 392 38.0
Cfa012872 Carpinus fangiana HOM05D007201 ORTHO05D009122 1.4e-37 161.0 392 36.7
PSO339G5324 Papaver somniferum HOM05D007201 ORTHO05D009122 3.0e-37 159.8 380 38.4
Actinidia03796 Actinidia chinensis HOM05D007201 ORTHO05D009122 6.8e-37 158.7 386 37.6
Dinv26498 Davidia involucrata HOM05D007201 ORTHO05D009122 6.8e-37 158.7 373 39.1
Oeu000954.1 Olea europaea HOM05D007201 ORTHO05D009122 1.5e-36 157.5 221 51.6
Cc06_g23490 Coffea canephora HOM05D007201 ORTHO05D009122 3.7e-35 152.9 270 44.8
Thecc.09G202300 Theobroma cacao HOM05D007201 ORTHO05D009122 8.3e-35 151.8 393 35.9
QL11p005700 Quercus lobata HOM05D007201 ORTHO05D009122 1.4e-34 151.0 403 32.3
CSS0027843 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 2.4e-34 150.2 393 34.1
CiPaw.15G000100 Carya illinoinensis HOM05D007201 ORTHO05D009122 7.0e-34 148.7 393 37.4
Ciclev10008517m.g Citrus clementina HOM05D007201 ORTHO05D009122 1.2e-33 147.9 388 32.2
FAN22G0406 Fragaria x ananassa HOM05D007201 ORTHO05D009122 2.7e-33 146.7 343 33.8
Prupe.1G000600 Prunus persica HOM05D007201 ORTHO05D009122 5.9e-33 145.6 281 43.4
Lju50A20G7 Lonicera japonica HOM05D007201 ORTHO05D009122 7.8e-33 145.2 401 35.9
Nn8g41282 Nelumbo nucifera HOM05D007201 ORTHO05D009122 7.8e-33 145.2 363 36.6
PGSC0003DMG400002893 Solanum tuberosum HOM05D007201 ORTHO05D009122 3.8e-32 142.9 416 34.6
Duzib168G1263 Durio zibethinus HOM05D007201 ORTHO05D009122 5.0e-32 142.5 362 35.4
FvH4_4g00131 Fragaria vesca HOM05D007201 ORTHO05D009122 5.0e-32 142.5 377 32.1
unitig_8.g3542 Utricularia gibba HOM05D007201 ORTHO05D009122 8.6e-32 141.7 302 41.7
RcHm_v2.0_Chr4g0384751 Rosa chinensis HOM05D007201 ORTHO05D009122 1.9e-31 140.6 387 31.5
MD04G1000600 Malus domestica HOM05D007201 ORTHO05D009122 5.6e-31 139.0 376 34.6
Gorai.012G009900 Gossypium raimondii HOM05D007201 ORTHO05D009122 9.5e-31 138.3 395 33.9
Sopen12g004380 Solanum pennellii HOM05D007201 ORTHO05D009122 1.2e-30 137.9 426 32.4
Solyc12g009390.2 Solanum lycopersicum HOM05D007201 ORTHO05D009122 4.7e-30 136.0 420 32.1
MELO3C010035.2 Cucumis melo HOM05D007201 ORTHO05D009122 6.1e-30 135.6 378 33.6
Manes.02G222200 Manihot esculenta HOM05D007201 ORTHO05D009122 8.0e-30 135.2 382 32.7
FAN12G0236 Fragaria x ananassa HOM05D007201 ORTHO05D009122 1.4e-29 134.4 375 31.2
Gohir.D04G008200 Gossypium hirsutum HOM05D007201 ORTHO05D009122 1.4e-29 134.4 377 36.9
DCAR_019970 Daucus carota HOM05D002293 ORTHO05D005475 5.2e-29 132.5 280 40.0
TAR626G0209 Trochodendron aralioides HOM05D007201 ORTHO05D009122 1.5e-28 131.0 282 35.5
CAN.G1591.3 Capsicum annuum HOM05D007201 ORTHO05D009122 2.0e-28 130.6 249 41.0
CsaV3_1G044360 Cucumis sativus L. HOM05D007201 ORTHO05D009122 3.4e-28 129.8 374 32.9
Lsat_1_v5_gn_5_80700 Lactuca sativa HOM05D007201 ORTHO05D009122 5.7e-28 129.0 371 34.8
GSVIVG01034266001 Vitis vinifera HOM05D007201 ORTHO05D009122 3.7e-27 126.3 394 34.3
Atru.chr7.298 Acer truncatum HOM05D007201 ORTHO05D009122 4.9e-27 125.9 301 34.9
Sc10g0006090 Simmondsia chinensis HOM05D007201 ORTHO05D009122 4.9e-27 125.9 379 34.0
Peaxi162Scf00047g02450 Petunia axillaris HOM05D007201 ORTHO05D009122 1.8e-26 124.0 378 34.1
HanXRQChr10g0309261 Helianthus annuus HOM05D007201 ORTHO05D009122 2.4e-26 123.6 277 45.1
Sabra06G0061200 Salix brachista HOM05D007201 ORTHO05D009122 2.4e-26 123.6 261 43.7
Potri.006G081100 Populus trichocarpa HOM05D007201 ORTHO05D009122 3.2e-26 123.2 305 37.0
COL.COLO4_09000 Corchorus olitorius HOM05D007201 ORTHO05D009122 7.0e-26 122.1 403 32.5
ECA234G1264 Erigeron canadensis HOM05D007201 ORTHO05D009122 7.0e-26 122.1 372 33.6
Psat7g169960 Pisum sativum HOM05D007201 ORTHO05D009122 9.2e-26 121.7 411 33.3
Lj3g0009807 Lotus japonicus HOM05D007201 ORTHO05D009122 1.2e-25 121.3 371 35.3
Nitab4.5_0000073g0490 Nicotiana tabacum HOM05D007201 ORTHO05D009122 4.6e-25 119.4 437 30.9
EL10Ac2g03602 Beta vulgaris HOM05D007201 ORTHO05D009122 5.9e-25 119.0 279 37.3
Hund22525 Selenicereus undatus HOM05D007201 ORTHO05D009122 5.9e-25 119.0 369 34.4
Eucgr.C00055 Eucalyptus grandis HOM05D007201 ORTHO05D009122 7.8e-25 118.6 346 37.6
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 1.0e-24 118.2 392 34.4
Carub.0002s2218 Capsella rubella HOM05D007201 ORTHO05D009122 1.3e-24 117.9 382 34.6
VMungo1127G0228 Vigna mungo HOM05D007201 ORTHO05D009122 1.7e-24 117.5 372 34.9
Phvul.011G018600 Phaseolus vulgaris HOM05D007201 ORTHO05D009122 2.3e-24 117.1 357 34.7
Glyma.11G109000 Glycine max HOM05D007201 ORTHO05D009122 8.6e-24 115.2 369 35.2
CSS0037159 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 1.5e-23 114.4 303 33.7
TPR.G28027 Trifolium pratense HOM05D007201 ORTHO05D009122 3.3e-23 113.2 412 30.1
arahy.Tifrunner.gnm1.ann1.G7GJBK Arachis hypogaea HOM05D007201 ORTHO05D009122 2.8e-22 110.2 388 35.1
arahy.Tifrunner.gnm1.ann1.X4HTYC Arachis hypogaea HOM05D007201 ORTHO05D009122 4.7e-22 109.4 391 34.8
CANSAT25G2467 Cannabis sativa HOM05D007201 ORTHO05D009122 4.7e-22 109.4 229 35.8
HPP92_017373 Vanilla planifolia HOM05D007201 ORTHO05D009122 1.4e-21 107.8 371 34.5
Medtr4g078160 Medicago truncatula HOM05D007201 ORTHO05D009122 1.8e-21 107.5 395 32.7
THA.LOC104809224 Tarenaya hassleriana HOM05D007201 ORTHO05D009122 1.8e-21 107.5 392 32.1
Aqoxy7G02518 Aquilegia oxysepala HOM05D007201 ORTHO05D009122 3.1e-21 106.7 295 33.9
Glyma.12G016400 Glycine max HOM05D007201 ORTHO05D009122 5.2e-21 105.9 369 33.1
Cpa.g.sc46.114 Carica papaya HOM05D007201 ORTHO05D009122 8.9e-21 105.1 261 39.8
FAN12G1512 Fragaria x ananassa HOM05D007201 ORTHO05D009122 8.9e-21 105.1 260 35.4
SHI24431 Sapria himalayana HOM05D007201 ORTHO05D009122 1.2e-20 104.8 266 36.8
Sp5g30480 Schrenkiella parvula HOM05D007201 ORTHO05D009122 2.0e-20 104.0 242 37.6
CSS0027553 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 9.8e-20 101.7 220 35.5
Lalb_Chr19g0140031 Lupinus albus HOM05D007201 ORTHO05D009122 2.9e-19 100.1 374 31.6
Nitab4.5_0004827g0030 Nicotiana tabacum HOM05D007201 ORTHO05D009122 3.7e-19 99.8 341 30.5
Aqoxy37s001 Aquilegia oxysepala HOM05D007201 ORTHO05D009122 4.9e-19 99.4 289 33.9
PGR142G4385 Punica granatum HOM05D007201 ORTHO05D009122 4.9e-19 99.4 383 31.1
AL2G35270 Arabidopsis lyrata HOM05D007201 ORTHO05D009122 1.9e-18 97.4 284 35.2
CDE04G0352 Ceratophyllum demersum HOM05D007201 ORTHO05D009122 2.4e-18 97.1 345 29.9
Thhalv10018711m.g Eutrema salsugineum HOM05D007201 ORTHO05D009122 2.4e-18 97.1 392 33.2
C06p49330 Brassica napus HOM05D007201 ORTHO05D009122 4.1e-18 96.3 409 31.3
A07p40900 Brassica napus HOM05D007201 ORTHO05D009122 7.0e-18 95.5 408 30.9
ATR0626G320 Amborella trichopoda HOM05D007201 ORTHO05D009122 9.2e-18 95.1 315 31.4
BraA07t31630Z Brassica rapa HOM05D007201 ORTHO05D009122 1.0e-16 91.7 417 30.5
vmacro22702 Vaccinium macrocarpon HOM05D007201 ORTHO05D009122 1.0e-16 91.7 487 25.5
CARHR068690 Cardamine hirsuta HOM05D007201 ORTHO05D009122 3.9e-16 89.7 266 37.6
BcaC08g47362 Brassica carinata HOM05D007201 ORTHO05D009122 8.6e-16 88.6 409 31.8
Os06g0704300 Oryza sativa ssp. japonica HOM05D007201 ORTHO05D009122 1.1e-15 88.2 374 32.1
AT1G75340 Arabidopsis thaliana HOM05D007201 ORTHO05D009122 5.6e-15 85.9 230 34.3
AUR62027959 Chenopodium quinoa HOM05D007201 ORTHO05D009122 1.6e-14 84.3 257 36.2
FAN17G0247 Fragaria x ananassa HOM05D007201 ORTHO05D009122 2.8e-14 83.6 106 43.4
BolC6t39968H Brassica oleracea HOM05D007201 ORTHO05D009122 4.7e-14 82.8 222 37.8
SEGI_05170 Sequoiadendron giganteum HOM05D007201 ORTHO05D009122 4.7e-14 82.8 293 31.1
Aa31LG4G5550 Aethionema arabicum HOM05D007201 ORTHO05D009122 1.4e-13 81.3 279 36.9
Zm00001eb227240 Zea mays HOM05D007201 ORTHO05D009122 9.8e-12 75.1 221 31.7
Gohir.A05G407400 Gossypium hirsutum HOM05D007201 ORTHO05D009122 3.9e-08 63.2 229 29.3
Pp3c7_12210 Physcomitrium patens HOM05D007201 ORTHO05D009122 1.6e-06 57.8 217 29.5


User provided reference genes

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