Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00003 Erythranthe guttata HOM05D024404 ORTHO05D190065 2.3e-82 308.9 165 100.0
Migut.C00323 Erythranthe guttata HOM05D024404 ORTHO05D189497 2.1e-75 285.8 177 89.8
Migut.C00322 Erythranthe guttata HOM05D024404 ORTHO05D190586 2.3e-69 265.8 169 88.2
Migut.C00313 Erythranthe guttata HOM05D024404 ORTHO05D190750 7.3e-52 207.6 118 96.6
Migut.C00314 Erythranthe guttata HOM05D024404 ORTHO05D190053 1.8e-50 203.0 147 80.3
Migut.C00315 Erythranthe guttata HOM05D039034 ORTHO05D189454 2.8e-11 72.8 99 49.5
Sopen03g037240 Solanum pennellii HOM05D000422 ORTHO05D001248 1.2e-09 67.4 109 47.7
PGSC0003DMG400014248 Solanum tuberosum HOM05D000422 ORTHO05D001248 1.5e-09 67.0 109 47.7
Migut.I00611 Erythranthe guttata HOM05D000422 ORTHO05D001248 2.6e-09 66.2 87 54.0
Solyc03g118340.3 Solanum lycopersicum HOM05D000422 ORTHO05D001248 2.6e-09 66.2 109 46.8
CAN.G521.3 Capsicum annuum HOM05D000422 ORTHO05D001248 4.5e-09 65.5 86 52.3
Nitab4.5_0003119g0020 Nicotiana tabacum HOM05D000422 ORTHO05D001248 4.5e-09 65.5 86 52.3
Nitab4.5_0009686g0040 Nicotiana tabacum HOM05D000422 ORTHO05D001248 4.5e-09 65.5 86 52.3
Sc04g0000250 Simmondsia chinensis HOM05D000422 ORTHO05D001248 5.8e-09 65.1 108 48.1
Manes.06G125800 Manihot esculenta HOM05D000422 ORTHO05D001248 7.6e-09 64.7 79 53.2
Manes.14G045700 Manihot esculenta HOM05D000422 ORTHO05D001248 2.2e-08 63.2 79 51.9
Nitab4.5_0000663g0180 Nicotiana tabacum HOM05D000422 ORTHO05D001248 2.2e-08 63.2 86 51.2
Nitab4.5_0002450g0030 Nicotiana tabacum HOM05D000422 ORTHO05D001248 2.2e-08 63.2 86 51.2
Peaxi162Scf00314g00528 Petunia axillaris HOM05D000422 ORTHO05D001248 2.2e-08 63.2 86 51.2
Ah.02g114650 Amaranthus hybridus HOM05D000422 ORTHO05D001248 2.9e-08 62.8 108 46.3
Hund10055 Selenicereus undatus HOM05D000422 ORTHO05D001248 2.9e-08 62.8 107 46.7
Ah.11g046770 Amaranthus hybridus HOM05D000422 ORTHO05D001248 3.8e-08 62.4 108 46.3
DCAR_025657 Daucus carota HOM05D000422 ORTHO05D001248 3.8e-08 62.4 108 47.2
MSTRG.4638 Avicennia marina HOM05D000422 ORTHO05D001248 4.9e-08 62.0 108 46.3
PGSC0003DMG402014476 Solanum tuberosum HOM05D000422 ORTHO05D001248 4.9e-08 62.0 86 51.2
CAN.G843.23 Capsicum annuum HOM05D000422 ORTHO05D001248 6.5e-08 61.6 109 45.9
Oeu013654.1 Olea europaea HOM05D000422 ORTHO05D001248 6.5e-08 61.6 108 47.2
Oeu013655.1 Olea europaea HOM05D000422 ORTHO05D001248 6.5e-08 61.6 108 47.2
Oeu017192.1 Olea europaea HOM05D000422 ORTHO05D001248 6.5e-08 61.6 108 46.3
Oeu061251.2 Olea europaea HOM05D000422 ORTHO05D001248 6.5e-08 61.6 108 47.2
Peaxi162Scf01168g00111 Petunia axillaris HOM05D000422 ORTHO05D001248 6.5e-08 61.6 86 51.2
Psat5g054560 Pisum sativum HOM05D000422 ORTHO05D001248 6.5e-08 61.6 79 53.2
DCAR_016352 Daucus carota HOM05D000422 ORTHO05D001248 8.4e-08 61.2 108 47.2
Aqoxy3G01886 Aquilegia oxysepala HOM05D000422 ORTHO05D001248 1.1e-07 60.8 84 48.8
unitig_62.g23818 Utricularia gibba HOM05D000422 ORTHO05D001248 1.1e-07 60.8 108 46.3
Migut.D01192 Erythranthe guttata HOM05D000422 ORTHO05D001248 1.4e-07 60.5 100 48.0
HanXRQChr05g0154561 Helianthus annuus HOM05D000422 ORTHO05D001248 1.4e-07 60.5 108 46.3
HanXRQChr08g0235061 Helianthus annuus HOM05D000422 ORTHO05D001248 1.4e-07 60.5 108 46.3
Lj1g0019828 Lotus japonicus HOM05D000422 ORTHO05D001248 1.4e-07 60.5 79 51.9
SalBow1G7968 Salvia bowleyana HOM05D000422 ORTHO05D001248 1.4e-07 60.5 108 47.2
A03p16460 Brassica napus HOM05D000422 ORTHO05D001248 1.9e-07 60.1 92 47.8
C03p19350 Brassica napus HOM05D000422 ORTHO05D001248 1.9e-07 60.1 92 47.8
BolC3t14321H Brassica oleracea HOM05D000422 ORTHO05D001248 1.9e-07 60.1 92 47.8
BraA03t10935Z Brassica rapa HOM05D000422 ORTHO05D001248 1.9e-07 60.1 92 47.8
CARHR257340 Cardamine hirsuta HOM05D000422 ORTHO05D001248 1.9e-07 60.1 92 47.8
COL.COLO4_37236 Corchorus olitorius HOM05D000422 ORTHO05D001248 1.9e-07 60.1 78 52.6
Thhalv10012603m.g Eutrema salsugineum HOM05D000422 ORTHO05D001248 1.9e-07 60.1 92 47.8
HanXRQChr09g0273921 Helianthus annuus HOM05D000422 ORTHO05D001248 1.9e-07 60.1 107 45.8
Lsat_1_v5_gn_5_15861 Lactuca sativa HOM05D000422 ORTHO05D001248 1.9e-07 60.1 108 46.3
Nn4g22167 Nelumbo nucifera HOM05D000422 ORTHO05D001248 1.9e-07 60.1 79 50.6
Sp6g13090 Schrenkiella parvula HOM05D000422 ORTHO05D001248 1.9e-07 60.1 92 47.8
Aa31LG3G7410 Aethionema arabicum HOM05D000422 ORTHO05D001248 2.5e-07 59.7 89 51.7
MSTRG.9368 Avicennia marina HOM05D000422 ORTHO05D001248 2.5e-07 59.7 108 45.4
MELO3C020666.2 Cucumis melo HOM05D000422 ORTHO05D001248 2.5e-07 59.7 82 50.0
Gohir.A07G047400 Gossypium hirsutum HOM05D000422 ORTHO05D001248 2.5e-07 59.7 79 51.9
Gohir.D07G051600 Gossypium hirsutum HOM05D000422 ORTHO05D001248 2.5e-07 59.7 79 51.9
Gorai.001G054700 Gossypium raimondii HOM05D000422 ORTHO05D001248 2.5e-07 59.7 79 51.9
PGR004G1503 Punica granatum HOM05D000422 ORTHO05D001248 2.5e-07 59.7 79 51.9
PGR044G1784 Punica granatum HOM05D000422 ORTHO05D001248 2.5e-07 59.7 79 51.9
Hund02499 Selenicereus undatus HOM05D000422 ORTHO05D001248 2.5e-07 59.7 109 44.0
Solyc12g042060.3 Solanum lycopersicum HOM05D000422 ORTHO05D001248 2.5e-07 59.7 86 50.0
Sopen12g021150 Solanum pennellii HOM05D000422 ORTHO05D001248 2.5e-07 59.7 86 50.0
PGSC0003DMG400021039 Solanum tuberosum HOM05D000422 ORTHO05D001248 2.5e-07 59.7 95 47.4
CSS0021948 Camellia sinensis var. sinensis HOM05D000422 ORTHO05D001248 3.2e-07 59.3 108 46.3
AUR62009519 Chenopodium quinoa HOM05D000422 ORTHO05D001248 3.2e-07 59.3 97 47.4
AUR62009520 Chenopodium quinoa HOM05D000422 ORTHO05D001248 3.2e-07 59.3 97 47.4
AUR62034768 Chenopodium quinoa HOM05D000422 ORTHO05D001248 3.2e-07 59.3 97 47.4
CsaV3_1G033930 Cucumis sativus L. HOM05D000422 ORTHO05D001248 3.2e-07 59.3 82 50.0
Duzib205G0028 Durio zibethinus HOM05D000422 ORTHO05D001248 3.2e-07 59.3 79 51.9
Gohir.A03G056700 Gossypium hirsutum HOM05D000422 ORTHO05D001248 3.2e-07 59.3 79 51.9
HanXRQChr16g0498881 Helianthus annuus HOM05D000422 ORTHO05D001248 3.2e-07 59.3 108 45.4
Lalb_Chr23g0272901 Lupinus albus HOM05D000422 ORTHO05D001248 3.2e-07 59.3 79 51.9
Sc22g0003500 Simmondsia chinensis HOM05D000422 ORTHO05D001248 3.2e-07 59.3 97 47.4
Atru.chr6.1902 Acer truncatum HOM05D000422 ORTHO05D001248 4.2e-07 58.9 79 51.9
CSS0009915 Camellia sinensis var. sinensis HOM05D000422 ORTHO05D001248 4.2e-07 58.9 108 46.3
CSS0044818 Camellia sinensis var. sinensis HOM05D000422 ORTHO05D001248 4.2e-07 58.9 108 46.3
CiPaw.11G001300 Carya illinoinensis HOM05D000422 ORTHO05D001248 4.2e-07 58.9 78 51.3
Medtr3g498725 Medicago truncatula HOM05D000422 ORTHO05D001248 4.2e-07 58.9 79 50.6
unitig_52.g17037 Utricularia gibba HOM05D000422 ORTHO05D001248 4.2e-07 58.9 86 50.0
ATR0582G302 Amborella trichopoda HOM05D000422 ORTHO05D001248 5.5e-07 58.5 79 49.4
MSTRG.22854 Avicennia marina HOM05D000422 ORTHO05D001248 5.5e-07 58.5 108 43.5
Eucgr.K02198 Eucalyptus grandis HOM05D000422 ORTHO05D001248 5.5e-07 58.5 79 51.9
Potri.012G105900 Populus trichocarpa HOM05D000422 ORTHO05D001248 5.5e-07 58.5 78 50.0
Sabra12G0078200 Salix brachista HOM05D000422 ORTHO05D001248 5.5e-07 58.5 82 48.8
THA.LOC104811561 Tarenaya hassleriana HOM05D000422 ORTHO05D001248 5.5e-07 58.5 122 44.3
TAR629G2448 Trochodendron aralioides HOM05D000422 ORTHO05D001248 5.5e-07 58.5 78 52.6
Aqoxy7G02623 Aquilegia oxysepala HOM05D000422 ORTHO05D001248 7.1e-07 58.2 84 47.6
arahy.Tifrunner.gnm1.ann1.40Y6RI Arachis hypogaea HOM05D000422 ORTHO05D001248 7.1e-07 58.2 87 50.6
arahy.Tifrunner.gnm1.ann1.PT1JHX Arachis hypogaea HOM05D000422 ORTHO05D001248 7.1e-07 58.2 87 50.6
C01p31380 Brassica napus HOM05D000422 ORTHO05D001248 7.1e-07 58.2 89 48.3
Gohir.D03G109800 Gossypium hirsutum HOM05D000422 ORTHO05D001248 7.1e-07 58.2 79 50.6
Gorai.003G116200 Gossypium raimondii HOM05D000422 ORTHO05D001248 7.1e-07 58.2 79 50.6
Lj4g0023906 Lotus japonicus HOM05D000422 ORTHO05D001248 7.1e-07 58.2 78 50.0
MBI07_g07341_MAGBIO Magnolia biondii HOM05D000422 ORTHO05D001248 7.1e-07 58.2 79 49.4
EL10Ac5g11304 Beta vulgaris HOM05D000422 ORTHO05D001248 9.3e-07 57.8 97 46.4
Lalb_Chr11g0069261 Lupinus albus HOM05D000422 ORTHO05D001248 9.3e-07 57.8 78 51.3
Potri.015G105100 Populus trichocarpa HOM05D000422 ORTHO05D001248 9.3e-07 57.8 78 47.4
Thecc.03G138700 Theobroma cacao HOM05D000422 ORTHO05D001248 9.3e-07 57.8 78 51.3
CiPaw.12G001600 Carya illinoinensis HOM05D000422 ORTHO05D001248 1.2e-06 57.4 78 51.3
Ca_10884_v3 Cicer arietinum L. HOM05D000422 ORTHO05D001248 1.2e-06 57.4 78 51.3
FvH4_5g09290 Fragaria vesca HOM05D000422 ORTHO05D001248 1.2e-06 57.4 79 50.6
FAN04G3089 Fragaria x ananassa HOM05D000422 ORTHO05D001248 1.2e-06 57.4 79 50.6
FAN08G0605 Fragaria x ananassa HOM05D000422 ORTHO05D001248 1.2e-06 57.4 79 50.6
FAN18G4242 Fragaria x ananassa HOM05D000422 ORTHO05D001248 1.2e-06 57.4 79 50.6
Medtr3g102830 Medicago truncatula HOM05D000422 ORTHO05D001248 1.2e-06 57.4 78 51.3
Os12g0230100 Oryza sativa ssp. japonica HOM05D000422 ORTHO05D001248 1.2e-06 57.4 78 44.9
Sabra15G0125300 Salix brachista HOM05D000422 ORTHO05D001248 1.2e-06 57.4 84 48.8
Sed0016051 Sechium edule HOM05D000422 ORTHO05D001248 1.2e-06 57.4 82 50.0
AL8G25110 Arabidopsis lyrata HOM05D000422 ORTHO05D001248 1.6e-06 57.0 92 45.7
AT5G50920 Arabidopsis thaliana HOM05D000422 ORTHO05D001248 1.6e-06 57.0 92 45.7
BraA01t02426Z Brassica rapa HOM05D000422 ORTHO05D001248 1.6e-06 57.0 90 47.8
CANSAT56G1478 Cannabis sativa HOM05D000422 ORTHO05D001248 1.6e-06 57.0 79 50.6
Cc04_g05910 Coffea canephora HOM05D000422 ORTHO05D001248 1.6e-06 57.0 108 44.4
Duzib068G0301 Durio zibethinus HOM05D000422 ORTHO05D001248 1.6e-06 57.0 86 48.8
Glyma.04G200400 Glycine max HOM05D000422 ORTHO05D001248 1.6e-06 57.0 78 51.3
Glyma.06G165200 Glycine max HOM05D000422 ORTHO05D001248 1.6e-06 57.0 78 51.3
MD14G1148700 Malus domestica HOM05D000422 ORTHO05D001248 1.6e-06 57.0 79 50.6
RcHm_v2.0_Chr7g0188931 Rosa chinensis HOM05D000422 ORTHO05D001248 1.6e-06 57.0 79 50.6
THA.LOC104821539 Tarenaya hassleriana HOM05D000422 ORTHO05D001248 1.6e-06 57.0 90 47.8
TPR.G21580 Trifolium pratense HOM05D000422 ORTHO05D001248 1.6e-06 57.0 78 51.3
arahy.Tifrunner.gnm1.ann1.ZC3RNY Arachis hypogaea HOM05D000422 ORTHO05D001248 2.1e-06 56.6 79 49.4
BcaB05g22981 Brassica carinata HOM05D000422 ORTHO05D001248 2.1e-06 56.6 88 47.7
BcaC09g49911 Brassica carinata HOM05D000422 ORTHO05D001248 2.1e-06 56.6 89 48.3
BolC1t03075H Brassica oleracea HOM05D000422 ORTHO05D001248 2.1e-06 56.6 89 48.3
Carub.0008s1093 Capsella rubella HOM05D000422 ORTHO05D001248 2.1e-06 56.6 92 45.7
Ciclev10030863m.g Citrus clementina HOM05D000422 ORTHO05D001248 2.1e-06 56.6 78 51.3
ECA232G2662 Erigeron canadensis HOM05D000422 ORTHO05D001248 2.1e-06 56.6 108 45.4
Hma1.2p1_1070F.1_g254130 Hydrangea macrophylla HOM05D000422 ORTHO05D001248 2.1e-06 56.6 86 48.8
Hma1.2p1_1171F.1_g263510 Hydrangea macrophylla HOM05D000422 ORTHO05D001248 2.1e-06 56.6 86 48.8
Prupe.5G143300 Prunus persica HOM05D000422 ORTHO05D001248 2.1e-06 56.6 79 50.6
Sed0011803 Sechium edule HOM05D000422 ORTHO05D001248 2.1e-06 56.6 89 47.2
SGA_v2.0_scaffold142G35654 Striga asiatica HOM05D000422 ORTHO05D001248 2.1e-06 56.6 111 39.6
TAR622G0976 Trochodendron aralioides HOM05D000422 ORTHO05D001248 2.1e-06 56.6 98 45.9
BcaB01g00774 Brassica carinata HOM05D000422 ORTHO05D001248 2.7e-06 56.2 91 46.2
A01p25180 Brassica napus HOM05D000422 ORTHO05D001248 2.7e-06 56.2 90 46.7
A06p18880 Brassica napus HOM05D000422 ORTHO05D001248 2.7e-06 56.2 91 46.2
C08p23840 Brassica napus HOM05D000422 ORTHO05D001248 2.7e-06 56.2 91 46.2
BraA06t24971Z Brassica rapa HOM05D000422 ORTHO05D001248 2.7e-06 56.2 91 46.2
CBR_g8305 Chara braunii HOM05D000422 ORTHO05D001248 2.7e-06 56.2 90 43.3
ClCG06G018330 Citrullus lanatus HOM05D000422 ORTHO05D001248 2.7e-06 56.2 78 50.0
MELO3C026162.2 Cucumis melo HOM05D000422 ORTHO05D001248 2.7e-06 56.2 78 50.0
CsaV3_1G000100 Cucumis sativus L. HOM05D000422 ORTHO05D001248 2.7e-06 56.2 78 50.0
Dinv13735 Davidia involucrata HOM05D000422 ORTHO05D001248 2.7e-06 56.2 100 47.0
HanXRQChr02g0035741 Helianthus annuus HOM05D000422 ORTHO05D001248 2.7e-06 56.2 83 49.4
Phvul.009G162100 Phaseolus vulgaris HOM05D000422 ORTHO05D001248 2.7e-06 56.2 78 50.0
QL10p000886 Quercus lobata HOM05D000422 ORTHO05D001248 2.7e-06 56.2 79 50.6
THA.LOC104798922 Tarenaya hassleriana HOM05D000422 ORTHO05D001248 2.7e-06 56.2 89 48.3
TWI23G0413 Tripterygium wilfordii HOM05D000422 ORTHO05D001248 2.7e-06 56.2 78 51.3
TWI39G0664 Tripterygium wilfordii HOM05D000422 ORTHO05D001248 2.7e-06 56.2 78 51.3
vmacro19167 Vaccinium macrocarpon HOM05D000422 ORTHO05D001248 2.7e-06 56.2 78 50.0
BcaC07g39362 Brassica carinata HOM05D000422 ORTHO05D001248 3.5e-06 55.8 91 46.2
BolC8t50010H Brassica oleracea HOM05D000422 ORTHO05D001248 3.5e-06 55.8 91 46.2
Ca_17585_v3 Cicer arietinum L. HOM05D000422 ORTHO05D001248 3.5e-06 55.8 78 50.0
FAN13G2516 Fragaria x ananassa HOM05D000422 ORTHO05D001248 3.5e-06 55.8 79 49.4
SalBow7G0009 Salvia bowleyana HOM05D000422 ORTHO05D001248 3.5e-06 55.8 79 49.4
Zm00001eb421360 Zea mays HOM05D000422 ORTHO05D001248 3.5e-06 55.8 89 46.1
ClCG03G001710 Citrullus lanatus HOM05D000422 ORTHO05D001248 4.6e-06 55.5 74 51.4
Lalb_Chr12g0202421 Lupinus albus HOM05D000422 ORTHO05D001248 4.6e-06 55.5 78 50.0
Lalb_Chr13g0297011 Lupinus albus HOM05D000422 ORTHO05D001248 4.6e-06 55.5 78 50.0
Nn3g16302 Nelumbo nucifera HOM05D000422 ORTHO05D001248 4.6e-06 55.5 78 50.0
SMO353G0292 Selaginella moellendorffii HOM05D000422 ORTHO05D001248 4.6e-06 55.5 90 41.1
TAR371G0742 Trochodendron aralioides HOM05D000422 ORTHO05D001248 4.6e-06 55.5 75 52.0
Zm00001eb084890 Zea mays HOM05D000422 ORTHO05D001248 4.6e-06 55.5 89 46.1
AagrBONN_evm.TU.Sc2ySwM_344.2914 Anthoceros agrestis HOM05D000422 ORTHO05D001248 6.0e-06 55.1 90 41.1
Duzib084G0746 Durio zibethinus HOM05D000422 ORTHO05D001248 6.0e-06 55.1 78 50.0
Glyma.05G201100 Glycine max HOM05D000422 ORTHO05D001248 6.0e-06 55.1 78 48.7
MD06G1132300 Malus domestica HOM05D000422 ORTHO05D001248 6.0e-06 55.1 108 45.4
PSO017G4374 Papaver somniferum HOM05D000422 ORTHO05D001248 6.0e-06 55.1 80 50.0
PSO478G3114 Papaver somniferum HOM05D000422 ORTHO05D001248 6.0e-06 55.1 80 50.0
CDE06G0243 Ceratophyllum demersum HOM05D000422 ORTHO05D001248 7.9e-06 54.7 98 43.9
ECA247G2359 Erigeron canadensis HOM05D000422 ORTHO05D001248 7.9e-06 54.7 102 46.1
ECA247G2390 Erigeron canadensis HOM05D000422 ORTHO05D001248 7.9e-06 54.7 102 46.1
Gohir.A12G193350 Gossypium hirsutum HOM05D000422 ORTHO05D001248 7.9e-06 54.7 74 51.4
Lsat_1_v5_gn_1_27961 Lactuca sativa HOM05D000422 ORTHO05D001248 7.9e-06 54.7 78 50.0
Lj9C485G16 Lonicera japonica HOM05D000422 ORTHO05D001248 7.9e-06 54.7 86 48.8
Lalb_Chr07g0183761 Lupinus albus HOM05D000422 ORTHO05D001248 7.9e-06 54.7 78 50.0
Oeu063942.1 Olea europaea HOM05D000422 ORTHO05D001248 7.9e-06 54.7 74 48.6
Pp3c3_18360 Physcomitrium patens HOM05D000422 ORTHO05D001248 7.9e-06 54.7 90 42.2
SGA_v2.0_scaffold40G15621 Striga asiatica HOM05D000422 ORTHO05D001248 7.9e-06 54.7 105 41.0
THA.LOC104825035 Tarenaya hassleriana HOM05D000422 ORTHO05D001248 7.9e-06 54.7 106 46.2
TPR.G12887 Trifolium pratense HOM05D000422 ORTHO05D001248 7.9e-06 54.7 78 50.0
Zm00001eb411490 Zea mays HOM05D000422 ORTHO05D001248 7.9e-06 54.7 78 44.9


User provided reference genes

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