Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.I00242 Erythranthe guttata HOM05D003786 ORTHO05D004375 3.9e-54 214.5 108 100.0
Migut.I00230 Erythranthe guttata HOM05D003786 ORTHO05D004375 1.2e-50 203.0 107 94.4
Migut.D02178 Erythranthe guttata HOM05D003786 ORTHO05D004375 2.9e-49 198.4 107 92.5
Migut.I00240 Erythranthe guttata HOM05D003786 ORTHO05D004375 1.9e-48 195.7 107 92.5
Migut.I00232 Erythranthe guttata HOM05D003786 ORTHO05D004375 6.0e-47 190.7 107 90.7
Migut.I00250 Erythranthe guttata HOM05D003786 ORTHO05D004375 3.0e-46 188.3 102 93.1
Migut.I00236 Erythranthe guttata HOM05D003786 ORTHO05D004375 6.9e-43 177.2 94 93.6
MSTRG.858 Avicennia marina HOM05D003786 ORTHO05D004375 2.1e-39 165.6 107 74.8
SalBow3G3536 Salvia bowleyana HOM05D003786 ORTHO05D004375 1.4e-35 152.9 107 68.2
Actinidia09138 Actinidia chinensis HOM05D003786 ORTHO05D004375 1.0e-33 146.7 105 65.7
GSVIVG01025123001 Vitis vinifera HOM05D003786 ORTHO05D004375 1.0e-33 146.7 107 68.2
Actinidia03750 Actinidia chinensis HOM05D003786 ORTHO05D004375 6.5e-33 144.1 107 63.6
Manes.11G140700 Manihot esculenta HOM05D003786 ORTHO05D004375 9.3e-32 140.2 107 63.6
Nitab4.5_0000106g0010 Nicotiana tabacum HOM05D003786 ORTHO05D004375 9.3e-32 140.2 107 64.5
TWI75G0263 Tripterygium wilfordii HOM05D003786 ORTHO05D004375 9.3e-32 140.2 107 61.7
Eucgr.J01130 Eucalyptus grandis HOM05D003786 ORTHO05D004375 1.2e-31 139.8 107 60.7
Rhsim13G0091800 Rhododendron simsii HOM05D003786 ORTHO05D004375 1.2e-31 139.8 108 62.0
Sabra09G0101900 Salix brachista HOM05D003786 ORTHO05D004375 1.2e-31 139.8 107 63.6
DCAR_006378 Daucus carota HOM05D003786 ORTHO05D004375 1.6e-31 139.4 107 61.7
CSS0041475 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 2.7e-31 138.7 107 61.7
Oeu012677.3 Olea europaea HOM05D003786 ORTHO05D004375 2.7e-31 138.7 106 63.2
Ciclev10029956m.g Citrus clementina HOM05D003786 ORTHO05D004375 3.6e-31 138.3 107 57.9
Cc00_g24070 Coffea canephora HOM05D003786 ORTHO05D004375 3.6e-31 138.3 107 64.5
DCAR_006383 Daucus carota HOM05D003786 ORTHO05D004375 4.6e-31 137.9 107 61.7
Nitab4.5_0001421g0060 Nicotiana tabacum HOM05D003786 ORTHO05D004375 4.6e-31 137.9 107 64.5
Potri.009G131500 Populus trichocarpa HOM05D003786 ORTHO05D004375 4.6e-31 137.9 107 63.6
SGA_v2.0_scaffold97G29166 Striga asiatica HOM05D003786 ORTHO05D004375 4.6e-31 137.9 107 60.7
vmacro03165 Vaccinium macrocarpon HOM05D003786 ORTHO05D004375 6.1e-31 137.5 108 62.0
TWI31G1207 Tripterygium wilfordii HOM05D003786 ORTHO05D004375 7.9e-31 137.1 107 61.7
Dinv01513 Davidia involucrata HOM05D003786 ORTHO05D004375 1.0e-30 136.7 107 61.7
Sabra09G0099700 Salix brachista HOM05D003786 ORTHO05D004375 1.4e-30 136.3 107 61.7
TAR369G0701 Trochodendron aralioides HOM05D003786 ORTHO05D004375 1.4e-30 136.3 107 61.7
Lj2P1038T21 Lonicera japonica HOM05D003786 ORTHO05D004375 3.0e-30 135.2 94 71.3
Rhsim13G0091500 Rhododendron simsii HOM05D003786 ORTHO05D004375 3.0e-30 135.2 108 60.2
CSS0045889 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 3.9e-30 134.8 107 58.9
CSS0017411 Camellia sinensis var. sinensis HOM05D003786 ORTHO05D004375 5.1e-30 134.4 108 60.2
HanXRQChr12g0373371 Helianthus annuus HOM05D003786 ORTHO05D004375 5.1e-30 134.4 107 60.7
Peaxi162Scf00072g00045 Petunia axillaris HOM05D003786 ORTHO05D004375 5.1e-30 134.4 107 62.6
QL01p036748 Quercus lobata HOM05D003786 ORTHO05D004375 5.1e-30 134.4 107 57.9
Nitab4.5_0005175g0020 Nicotiana tabacum HOM05D003786 ORTHO05D004375 6.7e-30 134.0 107 62.6
Thecc.09G261300 Theobroma cacao HOM05D003786 ORTHO05D004375 8.8e-30 133.7 107 57.9
Duzib168G0697 Durio zibethinus HOM05D003786 ORTHO05D004375 1.9e-29 132.5 107 57.9
Lsat_1_v5_gn_6_69540 Lactuca sativa HOM05D003786 ORTHO05D004375 3.3e-29 131.7 104 64.4
Nitab4.5_0005175g0010 Nicotiana tabacum HOM05D003786 ORTHO05D004375 3.3e-29 131.7 106 62.3
PGSC0003DMG400007497 Solanum tuberosum HOM05D003786 ORTHO05D004375 3.3e-29 131.7 107 62.6
Cpa.g.sc318.5 Carica papaya HOM05D003786 ORTHO05D004375 4.3e-29 131.3 107 58.9
Ah.12g063340 Amaranthus hybridus HOM05D003786 ORTHO05D004375 7.4e-29 130.6 107 58.9
Haze_23937 Corylus avellana HOM05D003786 ORTHO05D004375 7.4e-29 130.6 107 59.8
Manes.04G025700 Manihot esculenta HOM05D003786 ORTHO05D004375 7.4e-29 130.6 107 60.7
Sopen06g031770 Solanum pennellii HOM05D003786 ORTHO05D004375 7.4e-29 130.6 107 61.7
Atru.chr3.3714 Acer truncatum HOM05D003786 ORTHO05D004375 9.7e-29 130.2 107 57.9
ClCG02G020870 Citrullus lanatus HOM05D003786 ORTHO05D004375 9.7e-29 130.2 107 58.9
Migut.I00245 Erythranthe guttata HOM05D003786 ORTHO05D004375 9.7e-29 130.2 69 89.9
Solyc06g075350.3 Solanum lycopersicum HOM05D003786 ORTHO05D004375 1.3e-28 129.8 107 60.7
CAN.G1001.9 Capsicum annuum HOM05D003786 ORTHO05D004375 1.7e-28 129.4 107 61.7
COL.COLO4_25255 Corchorus olitorius HOM05D003786 ORTHO05D004375 3.7e-28 128.3 107 56.1
MELO3C025739.2 Cucumis melo HOM05D003786 ORTHO05D004375 4.8e-28 127.9 107 56.1
CsaV3_6G021540 Cucumis sativus L. HOM05D003786 ORTHO05D004375 4.8e-28 127.9 107 57.0
FAN05G3511 Fragaria x ananassa HOM05D003786 ORTHO05D008187 4.8e-28 127.9 107 57.0
Sc06g0010590 Simmondsia chinensis HOM05D003786 ORTHO05D004375 6.3e-28 127.5 107 57.9
EL10Ac6g14823 Beta vulgaris HOM05D003786 ORTHO05D004375 8.2e-28 127.1 107 54.2
FvH4_6g01503 Fragaria vesca HOM05D003786 ORTHO05D004375 8.2e-28 127.1 107 57.0
PGSC0003DMG401003373 Solanum tuberosum HOM05D003786 ORTHO05D004375 1.1e-27 126.7 107 59.8
PGSC0003DMG402003373 Solanum tuberosum HOM05D003786 ORTHO05D004375 1.1e-27 126.7 107 59.8
Haze_20932 Corylus avellana HOM05D003786 ORTHO05D004375 1.4e-27 126.3 107 57.9
FAN02G2859 Fragaria x ananassa HOM05D003786 ORTHO05D004375 1.8e-27 125.9 107 56.1
CAN.G1001.22 Capsicum annuum HOM05D003786 ORTHO05D004375 2.4e-27 125.6 107 58.9
PGR102G2306 Punica granatum HOM05D003786 ORTHO05D004375 2.4e-27 125.6 107 54.2
FAN05G1554 Fragaria x ananassa HOM05D003786 ORTHO05D008187 3.1e-27 125.2 107 56.1
Oeu022264.1 Olea europaea HOM05D003786 ORTHO05D004375 3.1e-27 125.2 95 64.2
Sed0001350 Sechium edule HOM05D003786 ORTHO05D004375 3.1e-27 125.2 108 57.4
RcHm_v2.0_Chr3g0449171 Rosa chinensis HOM05D003786 ORTHO05D004375 4.1e-27 124.8 107 55.1
FAN14G4371 Fragaria x ananassa HOM05D003786 ORTHO05D008187 5.3e-27 124.4 107 57.0
Prupe.6G093000 Prunus persica HOM05D003786 ORTHO05D004375 5.3e-27 124.4 107 58.9
AUR62042700 Chenopodium quinoa HOM05D003786 ORTHO05D004375 6.9e-27 124.0 107 54.2
AUR62044767 Chenopodium quinoa HOM05D003786 ORTHO05D004375 6.9e-27 124.0 107 54.2
FAN14G4130 Fragaria x ananassa HOM05D003786 ORTHO05D004375 6.9e-27 124.0 107 56.1
CiPaw.14G077400 Carya illinoinensis HOM05D003786 ORTHO05D004375 9.1e-27 123.6 107 57.0
FAN05G4299 Fragaria x ananassa HOM05D003786 ORTHO05D004375 9.1e-27 123.6 107 56.1
Gorai.013G002800 Gossypium raimondii HOM05D003786 ORTHO05D004375 1.2e-26 123.2 107 53.3
SGA_v2.0_scaffold32G12943 Striga asiatica HOM05D003786 ORTHO05D004375 1.2e-26 123.2 109 56.9
Gohir.D13G002900 Gossypium hirsutum HOM05D003786 ORTHO05D004375 1.5e-26 122.9 107 53.3
unitig_736.g22421 Utricularia gibba HOM05D003786 ORTHO05D004375 1.5e-26 122.9 107 57.0
AUR62040193 Chenopodium quinoa HOM05D003786 ORTHO05D004375 2.6e-26 122.1 107 53.3
Lsat_1_v5_gn_2_25701 Lactuca sativa HOM05D003786 ORTHO05D004375 2.6e-26 122.1 107 57.0
Ah.08g211230 Amaranthus hybridus HOM05D003786 ORTHO05D004375 3.4e-26 121.7 107 56.1
CANSAT54G0858 Cannabis sativa HOM05D003786 ORTHO05D004375 7.7e-26 120.6 107 54.2
CDE05G0279 Ceratophyllum demersum HOM05D003786 ORTHO05D004375 7.7e-26 120.6 104 55.8
Gohir.A13G003000 Gossypium hirsutum HOM05D003786 ORTHO05D004375 7.7e-26 120.6 107 52.3
Nn2g10664 Nelumbo nucifera HOM05D003786 ORTHO05D004375 2.2e-25 119.0 107 53.3
AUR62039602 Chenopodium quinoa HOM05D003786 ORTHO05D004375 2.9e-25 118.6 107 53.3
Phvul.001G137825 Phaseolus vulgaris HOM05D003786 ORTHO05D004375 6.5e-25 117.5 113 54.9
Phvul.001G138100 Phaseolus vulgaris HOM05D003786 ORTHO05D004375 6.5e-25 117.5 113 54.9
AL8G36840 Arabidopsis lyrata HOM05D003786 ORTHO05D004375 8.5e-25 117.1 104 58.7
MBI03_g28482_MAGBIO Magnolia biondii HOM05D003786 ORTHO05D004375 1.4e-24 116.3 104 55.8
BolC3t13761H Brassica oleracea HOM05D003786 ORTHO05D004375 1.9e-24 115.9 104 55.8
THA.LOC104810009 Tarenaya hassleriana HOM05D003786 ORTHO05D004375 1.9e-24 115.9 107 54.2
BcaB01g04647 Brassica carinata HOM05D003786 ORTHO05D004375 4.2e-24 114.8 107 54.2
BcaB08g36317 Brassica carinata HOM05D003786 ORTHO05D004375 4.2e-24 114.8 104 57.7
AUR62019620 Chenopodium quinoa HOM05D003786 ORTHO05D004375 5.5e-24 114.4 107 51.4
A10p17360 Brassica napus HOM05D003786 ORTHO05D004375 9.4e-24 113.6 104 55.8
BolC3t13758H Brassica oleracea HOM05D003786 ORTHO05D004375 9.4e-24 113.6 104 53.8
VMungo1127G2311 Vigna mungo HOM05D003786 ORTHO05D004375 1.2e-23 113.2 113 53.1
AT5G60230 Arabidopsis thaliana HOM05D003786 ORTHO05D004375 1.6e-23 112.8 104 56.7
arahy.Tifrunner.gnm1.ann1.XC8HKJ Arachis hypogaea HOM05D003786 ORTHO05D004375 2.1e-23 112.5 113 54.0
SHI14981 Sapria himalayana HOM05D003786 ORTHO05D004375 2.1e-23 112.5 107 49.5
BraA10t43819Z Brassica rapa HOM05D003786 ORTHO05D004375 2.7e-23 112.1 104 54.8
Psat3g070480 Pisum sativum HOM05D003786 ORTHO05D004375 2.7e-23 112.1 114 53.5
THA.LOC104799484 Tarenaya hassleriana HOM05D003786 ORTHO05D004375 3.6e-23 111.7 107 51.4
A03p11270 Brassica napus HOM05D003786 ORTHO05D004375 4.7e-23 111.3 107 53.3
BraA03t10439Z Brassica rapa HOM05D003786 ORTHO05D004375 4.7e-23 111.3 107 53.3
Carub.0008s2097 Capsella rubella HOM05D003786 ORTHO05D004375 6.1e-23 110.9 104 54.8
Thhalv10015366m.g Eutrema salsugineum HOM05D003786 ORTHO05D004375 6.1e-23 110.9 104 55.8
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 6.1e-23 110.9 113 52.2
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 6.1e-23 110.9 113 52.2
arahy.Tifrunner.gnm1.ann1.2E7PU8 Arachis hypogaea HOM05D003786 ORTHO05D004375 7.9e-23 110.5 113 53.1
TPR.G4813 Trifolium pratense HOM05D003786 ORTHO05D004375 7.9e-23 110.5 114 52.6
Peaxi162Scf00389g00065 Petunia axillaris HOM05D003786 ORTHO05D004375 1.0e-22 110.2 115 51.3
Lalb_Chr25g0287531 Lupinus albus HOM05D003786 ORTHO05D004375 1.4e-22 109.8 113 52.2
C09p52700 Brassica napus HOM05D003786 ORTHO05D004375 1.8e-22 109.4 104 54.8
BolC9t58138H Brassica oleracea HOM05D003786 ORTHO05D004375 1.8e-22 109.4 104 54.8
ECA233G5822 Erigeron canadensis HOM05D007880 ORTHO05D003386 1.8e-22 109.4 104 55.8
Sp6g21860 Schrenkiella parvula HOM05D003786 ORTHO05D004375 1.8e-22 109.4 103 55.3
TPR.G28524 Trifolium pratense HOM05D003786 ORTHO05D004375 1.8e-22 109.4 113 53.1
Lj1g0020830 Lotus japonicus HOM05D003786 ORTHO05D004375 2.3e-22 109.0 113 52.2
Medtr7g092500 Medicago truncatula HOM05D003786 ORTHO05D004375 3.0e-22 108.6 116 51.7
Glyma.10G072100 Glycine max HOM05D003786 ORTHO05D004375 3.9e-22 108.2 115 54.8
AT3G45590 Arabidopsis thaliana HOM05D003786 ORTHO05D004375 6.7e-22 107.5 107 50.5
MBI04_g27239_MAGBIO Magnolia biondii HOM05D003786 ORTHO05D004375 6.7e-22 107.5 104 51.0
Gohir.D13G224600 Gossypium hirsutum HOM05D003786 ORTHO05D004375 1.1e-21 106.7 102 52.0
Aa31LG5G20880 Aethionema arabicum HOM05D003786 ORTHO05D004375 1.5e-21 106.3 107 48.6
Ca_08491_v3 Cicer arietinum L. HOM05D003786 ORTHO05D004375 1.5e-21 106.3 114 51.8
Ca_30036_v3 Cicer arietinum L. HOM05D003786 ORTHO05D004375 1.5e-21 106.3 114 51.8
Lj1g0003252 Lotus japonicus HOM05D003786 ORTHO05D004375 1.5e-21 106.3 113 50.4
VMungo0563G0001 Vigna mungo HOM05D003786 ORTHO05D004375 1.5e-21 106.3 113 49.6
Aqoxy6G02754 Aquilegia oxysepala HOM05D003786 ORTHO05D004375 2.6e-21 105.5 104 47.1
Gorai.013G255400 Gossypium raimondii HOM05D003786 ORTHO05D004375 2.6e-21 105.5 102 52.0
Aa31LG4G14750 Aethionema arabicum HOM05D003786 ORTHO05D004375 3.3e-21 105.1 107 46.7
PSO541G4585 Papaver somniferum HOM05D003786 ORTHO05D004375 4.4e-21 104.8 110 50.0
ATR0763G039 Amborella trichopoda HOM05D003786 ORTHO05D004375 5.7e-21 104.4 105 51.4
Aqoxy2G03481_Aqoxy2G03482 Aquilegia oxysepala HOM05D003786 ORTHO05D004375 7.4e-21 104.0 104 44.2
Carub.0005s1880 Capsella rubella HOM05D003786 ORTHO05D004375 7.4e-21 104.0 94 57.4
Glyma.04G189200 Glycine max HOM05D003786 ORTHO05D004375 1.3e-20 103.2 100 56.0
Gohir.A13G220600 Gossypium hirsutum HOM05D003786 ORTHO05D004375 1.3e-20 103.2 93 53.8
MD11G1124300 Malus domestica HOM05D003786 ORTHO05D004375 1.3e-20 103.2 89 55.1
Medtr0262s0030 Medicago truncatula HOM05D003786 ORTHO05D004375 1.3e-20 103.2 114 50.9
PSO675G4257 Papaver somniferum HOM05D003786 ORTHO05D004375 1.3e-20 103.2 110 49.1
MD11G1123700 Malus domestica HOM05D003786 ORTHO05D004375 1.7e-20 102.8 89 55.1
AL5G24200 Arabidopsis lyrata HOM05D003786 ORTHO05D004375 2.8e-20 102.1 107 47.7
Psat6g109040 Pisum sativum HOM05D003786 ORTHO05D004375 3.7e-20 101.7 102 54.9
HanXRQChr01g0022711 Helianthus annuus HOM05D003786 ORTHO05D004375 1.2e-18 96.7 104 51.0
ECA238G1499 Erigeron canadensis HOM05D003786 ORTHO05D004375 1.5e-18 96.3 107 47.7
Thhalv10002801m.g Eutrema salsugineum HOM05D003786 ORTHO05D004375 2.2e-17 92.4 95 47.4
BcaC04g19667 Brassica carinata HOM05D000666 ORTHO05D001727 5.0e-17 91.3 85 56.5
SEGI_12201 Sequoiadendron giganteum HOM05D003786 ORTHO05D004375 1.9e-16 89.4 112 44.6
Peaxi162Scf00272g00092 Petunia axillaris HOM05D003786 ORTHO05D004375 8.0e-15 84.0 63 71.4
CARHR273910 Cardamine hirsuta HOM05D003786 ORTHO05D004375 1.4e-14 83.2 80 55.0
RcHm_v2.0_Chr5g0061031 Rosa chinensis HOM05D003786 ORTHO05D004375 1.4e-14 83.2 97 45.4
C03p12960 Brassica napus HOM05D003786 ORTHO05D004375 6.7e-14 80.9 76 48.7
Sabra09G0100500 Salix brachista HOM05D003786 ORTHO05D004375 1.5e-13 79.7 65 64.6
HPP92_017618 Vanilla planifolia HOM05D003786 ORTHO05D004375 5.7e-13 77.8 104 40.4
Os11g0602400 Oryza sativa ssp. japonica HOM05D003786 ORTHO05D004375 4.8e-12 74.7 110 38.2
Zm00001eb228610 Zea mays HOM05D003786 ORTHO05D004375 2.2e-09 65.9 101 40.6
Mapoly0072s0108 Marchantia polymorpha HOM05D003786 ORTHO05D004375 8.5e-09 63.9 118 35.6
AT3G45577 Arabidopsis thaliana HOM05D003786 ORTHO05D004375 2.7e-07 58.9 58 51.7
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 4.7e-07 58.2 57 43.9
Nitab4.5_0000888g0190 Nicotiana tabacum HOM05D003786 ORTHO05D004375 1.4e-06 56.6 40 72.5


User provided reference genes

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