Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0169s0023 Marchantia polymorpha HOM05D006136 ORTHO05D007244 0.0e+00 1545.8 935 100.0
AagrBONN_evm.TU.Sc2ySwM_228.2439 Anthoceros agrestis HOM05D006136 ORTHO05D007244 1.5e-37 162.5 305 38.7
SEGI_05126 Sequoiadendron giganteum HOM05D006136 ORTHO05D007244 8.1e-31 140.2 194 38.7
EL10Ac2g03821 Beta vulgaris HOM05D006136 ORTHO05D007244 1.8e-30 139.0 320 33.4
Aqoxy7G02564 Aquilegia oxysepala HOM05D006136 ORTHO05D007244 2.4e-30 138.7 246 37.8
AUR62009114 Chenopodium quinoa HOM05D000163 ORTHO05D007244 2.4e-30 138.7 192 41.7
Cfa012873 Carpinus fangiana HOM05D006136 ORTHO05D007244 5.2e-30 137.5 206 42.7
QL11p005727 Quercus lobata HOM05D006136 ORTHO05D007244 8.9e-30 136.7 203 37.9
AUR62039148 Chenopodium quinoa HOM05D006136 ORTHO05D007244 2.0e-29 135.6 192 41.1
ECA234G2139 Erigeron canadensis HOM05D006136 ORTHO05D007244 2.6e-29 135.2 353 31.2
Sc06g0001020 Simmondsia chinensis HOM05D006136 ORTHO05D007244 2.6e-29 135.2 192 41.1
CiPaw.07G237600 Carya illinoinensis HOM05D006136 ORTHO05D007244 3.4e-29 134.8 224 37.1
GSVIVG01038350001 Vitis vinifera HOM05D006136 ORTHO05D007244 3.4e-29 134.8 205 39.0
Eucgr.C02149 Eucalyptus grandis HOM05D006136 ORTHO05D007244 7.6e-29 133.7 199 42.2
CSS0003139 Camellia sinensis var. sinensis HOM05D006136 ORTHO05D007244 9.9e-29 133.3 194 42.8
CSS0019621 Camellia sinensis var. sinensis HOM05D006136 ORTHO05D007244 9.9e-29 133.3 194 42.8
Migut.L01610 Erythranthe guttata HOM05D006136 ORTHO05D007244 9.9e-29 133.3 198 39.9
A10p16060 Brassica napus HOM05D006136 ORTHO05D007244 2.9e-28 131.7 197 39.6
Cc06_g23510 Coffea canephora HOM05D006136 ORTHO05D007244 2.9e-28 131.7 228 39.0
QL05p072260 Quercus lobata HOM05D000321 ORTHO05D007244 3.8e-28 131.3 195 40.5
Dinv12632 Davidia involucrata HOM05D006136 ORTHO05D002774 8.4e-28 130.2 197 40.6
PGR044G0474 Punica granatum HOM05D006136 ORTHO05D007244 8.4e-28 130.2 204 41.7
HanXRQChr10g0309281 Helianthus annuus HOM05D006136 ORTHO05D007244 1.1e-27 129.8 280 34.6
HPP92_017041 Vanilla planifolia HOM05D006136 ORTHO05D007244 1.9e-27 129.0 194 38.1
BcaB08g36165 Brassica carinata HOM05D006136 ORTHO05D007244 2.4e-27 128.6 224 37.1
Cpa.g.sc46.113 Carica papaya HOM05D006136 ORTHO05D007244 3.2e-27 128.3 195 39.5
SalBow5G5580 Salvia bowleyana HOM05D006136 ORTHO05D007244 3.2e-27 128.3 198 38.9
Ciclev10007497m.g Citrus clementina HOM05D006136 ORTHO05D007244 4.2e-27 127.9 209 40.7
COL.COLO4_09001 Corchorus olitorius HOM05D006136 ORTHO05D007244 4.2e-27 127.9 229 37.6
Os02g0138200 Oryza sativa ssp. japonica HOM05D006136 ORTHO05D007244 4.2e-27 127.9 271 34.7
PSO782G1690 Papaver somniferum HOM05D006136 ORTHO05D007244 4.2e-27 127.9 227 34.8
ATR0626G098 Amborella trichopoda HOM05D006136 ORTHO05D007244 5.4e-27 127.5 261 34.9
MSTRG.26507 Avicennia marina HOM05D006136 ORTHO05D007244 5.4e-27 127.5 198 38.9
BcaC04g19905 Brassica carinata HOM05D006136 ORTHO05D007244 5.4e-27 127.5 197 39.1
C09p50030 Brassica napus HOM05D006136 ORTHO05D007244 5.4e-27 127.5 197 39.1
BolC9t57856H Brassica oleracea HOM05D006136 ORTHO05D007244 5.4e-27 127.5 197 39.1
Thecc.09G202200 Theobroma cacao HOM05D006136 ORTHO05D007244 5.4e-27 127.5 228 36.8
Lsat_1_v5_gn_5_82020 Lactuca sativa HOM05D006136 ORTHO05D007244 7.1e-27 127.1 346 30.9
Actinidia33603 Actinidia chinensis HOM05D006136 ORTHO05D007244 9.3e-27 126.7 194 40.7
THA.LOC104803376 Tarenaya hassleriana HOM05D006136 ORTHO05D007244 9.3e-27 126.7 241 35.7
FAN17G2087 Fragaria x ananassa HOM05D006136 ORTHO05D007244 1.2e-26 126.3 206 38.3
Prupe.1G000700 Prunus persica HOM05D006136 ORTHO05D007244 1.2e-26 126.3 198 40.9
BraA10t43623Z Brassica rapa HOM05D006136 ORTHO05D007244 2.1e-26 125.6 197 37.6
Sopen07g022390 Solanum pennellii HOM05D006136 ORTHO05D007244 2.1e-26 125.6 325 33.2
AT5G58130 Arabidopsis thaliana HOM05D006136 ORTHO05D007244 2.7e-26 125.2 204 38.2
Atru.chr7.1014 Acer truncatum HOM05D006136 ORTHO05D007244 3.5e-26 124.8 206 37.9
Gohir.A08G016500 Gossypium hirsutum HOM05D006136 ORTHO05D007244 3.5e-26 124.8 192 40.1
PGSC0003DMG400013541 Solanum tuberosum HOM05D006136 ORTHO05D007244 3.5e-26 124.8 326 33.4
Lj6g0010551 Lotus japonicus HOM05D006136 ORTHO05D007244 4.6e-26 124.4 233 33.9
Oeu000955.1 Olea europaea HOM05D006136 ORTHO05D007244 4.6e-26 124.4 295 34.2
Gohir.D08G026500 Gossypium hirsutum HOM05D006136 ORTHO05D007244 7.8e-26 123.6 194 39.7
Gorai.004G023000 Gossypium raimondii HOM05D006136 ORTHO05D007244 7.8e-26 123.6 194 39.7
Manes.11G052190 Manihot esculenta HOM05D006136 ORTHO05D007244 7.8e-26 123.6 197 38.1
PSO478G4925 Papaver somniferum HOM05D006136 ORTHO05D007244 7.8e-26 123.6 271 32.5
FAN12G0507 Fragaria x ananassa HOM05D006136 ORTHO05D007244 1.3e-25 122.9 206 38.3
FAN12G3399 Fragaria x ananassa HOM05D006136 ORTHO05D007244 1.3e-25 122.9 206 38.3
Sabra18G0127000 Salix brachista HOM05D006136 ORTHO05D007244 1.3e-25 122.9 204 37.7
Manes.02G224001 Manihot esculenta HOM05D006136 ORTHO05D007244 1.7e-25 122.5 197 40.6
Carub.0008s1868 Capsella rubella HOM05D006136 ORTHO05D007244 2.3e-25 122.1 204 37.7
CARHR271930 Cardamine hirsuta HOM05D006136 ORTHO05D007244 2.3e-25 122.1 197 36.5
MD04G1000700 Malus domestica HOM05D006136 ORTHO05D007244 3.0e-25 121.7 203 40.9
Nitab4.5_0000807g0150 Nicotiana tabacum HOM05D006136 ORTHO05D007244 3.0e-25 121.7 322 32.9
Nn5g26953 Nelumbo nucifera HOM05D006136 ORTHO05D007244 3.9e-25 121.3 222 37.4
Thhalv10012942m.g Eutrema salsugineum HOM05D006136 ORTHO05D007244 5.1e-25 120.9 198 38.9
AL8G34230 Arabidopsis lyrata HOM05D006136 ORTHO05D007244 8.7e-25 120.2 197 38.6
Lalb_Chr08g0233201 Lupinus albus HOM05D006136 ORTHO05D007244 1.1e-24 119.8 333 32.1
Phvul.009G217200 Phaseolus vulgaris HOM05D006136 ORTHO05D007244 1.1e-24 119.8 201 38.3
Sp6g19810 Schrenkiella parvula HOM05D006136 ORTHO05D007244 1.5e-24 119.4 197 37.6
Zm00001eb209220 Zea mays HOM05D006136 ORTHO05D007244 2.5e-24 118.6 364 30.8
Aa31LG3G13960 Aethionema arabicum HOM05D006136 ORTHO05D007244 7.3e-24 117.1 207 36.2
RcHm_v2.0_Chr4g0384741 Rosa chinensis HOM05D006136 ORTHO05D007244 7.3e-24 117.1 206 36.4
Psat1g019160 Pisum sativum HOM05D006136 ORTHO05D007244 2.1e-23 115.5 204 36.8
Medtr2g048340 Medicago truncatula HOM05D006136 ORTHO05D007244 2.8e-23 115.2 251 32.3
TWI32G0914 Tripterygium wilfordii HOM05D006136 ORTHO05D007244 4.8e-23 114.4 196 38.3
TAR626G0660 Trochodendron aralioides HOM05D006136 ORTHO05D007244 6.2e-23 114.0 157 43.3
Peaxi162Scf00474g00018 Petunia axillaris HOM05D006136 ORTHO05D007244 1.1e-22 113.2 279 34.8
DCAR_020445 Daucus carota HOM05D006136 ORTHO05D002774 1.4e-22 112.8 256 32.0
MELO3C010014.2 Cucumis melo HOM05D006136 ORTHO05D007244 1.8e-22 112.5 196 35.7
unitig_699.g19255 Utricularia gibba HOM05D006136 ORTHO05D007244 3.1e-22 111.7 318 31.1
ClCG03G011600 Citrullus lanatus HOM05D006136 ORTHO05D007244 4.0e-22 111.3 241 34.4
CsaV3_1G044190 Cucumis sativus L. HOM05D006136 ORTHO05D007244 5.3e-22 110.9 195 35.4
Duzib170G0744 Durio zibethinus HOM05D006136 ORTHO05D007244 9.0e-22 110.2 196 36.2
Glyma.15G193100 Glycine max HOM05D006136 ORTHO05D007244 1.2e-21 109.8 359 27.3
MBI16_g40727_MAGBIO Magnolia biondii HOM05D006136 ORTHO05D007244 1.2e-21 109.8 350 29.1
SMO367G1245 Selaginella moellendorffii HOM05D006136 ORTHO05D007244 1.2e-21 109.8 366 29.2
Rhsim08G0117200 Rhododendron simsii HOM05D006136 ORTHO05D007244 2.6e-21 108.6 242 33.9
Glyma.09G084800 Glycine max HOM05D006136 ORTHO05D007244 3.4e-21 108.2 348 29.3
Potri.018G151300 Populus trichocarpa HOM05D006136 ORTHO05D007244 3.4e-21 108.2 357 28.9
CANSAT01G2594 Cannabis sativa HOM05D006136 ORTHO05D007244 4.5e-21 107.8 204 35.8
Ca_02520_v3 Cicer arietinum L. HOM05D006136 ORTHO05D007244 4.5e-21 107.8 191 37.7
Lj9A583T57 Lonicera japonica HOM05D006136 ORTHO05D007244 5.8e-21 107.5 416 28.8
CBR_g39420 Chara braunii HOM05D006136 ORTHO05D007244 6.4e-20 104.0 261 31.8
FAN22G1396 Fragaria x ananassa HOM05D006136 ORTHO05D007244 1.4e-19 102.8 206 35.0
arahy.Tifrunner.gnm1.ann1.46MDAV Arachis hypogaea HOM05D006136 ORTHO05D007244 2.4e-19 102.1 363 25.1
vmacro17832 Vaccinium macrocarpon HOM05D006136 ORTHO05D007244 6.0e-18 97.4 281 31.3
Nitab4.5_0000170g0140 Nicotiana tabacum HOM05D006136 ORTHO05D007244 1.0e-17 96.7 275 33.5
SGA_v2.0_scaffold21G09584 Striga asiatica HOM05D006136 ORTHO05D007244 1.3e-15 89.7 122 41.0
VMungo1309G0146 Vigna mungo HOM05D006136 ORTHO05D007244 3.7e-15 88.2 247 27.9
arahy.Tifrunner.gnm1.ann1.27MYTD Arachis hypogaea HOM05D006136 ORTHO05D007244 6.2e-15 87.4 96 46.9
arahy.Tifrunner.gnm1.ann1.QC7K1D Arachis hypogaea HOM05D006136 ORTHO05D007244 1.4e-14 86.3 96 44.8
Pp3c1_8430 Physcomitrium patens HOM05D006136 ORTHO05D007244 6.9e-14 84.0 965 25.3
arahy.Tifrunner.gnm1.ann1.Q88MA9 Arachis hypogaea HOM05D006136 ORTHO05D007244 1.2e-13 83.2 96 41.7
TPR.G18712 Trifolium pratense HOM05D006136 ORTHO05D007244 1.2e-13 83.2 137 34.3
Cre14.g633400 Chlamydomonas reinhardtii HOM05D006136 ORTHO05D007244 2.2e-12 79.0 112 40.2
CDE05G3219 Ceratophyllum demersum HOM05D006136 ORTHO05D007244 1.9e-11 75.9 170 31.8
PGR044G0304 Punica granatum HOM05D006136 ORTHO05D007244 3.2e-11 75.1 339 29.8
GSVIVG01038333001 Vitis vinifera HOM05D006136 ORTHO05D007244 5.5e-11 74.3 179 29.6
Haze_21244 Corylus avellana HOM05D006136 ORTHO05D007244 1.3e-09 69.7 126 36.5
Solyc07g042740.3 Solanum lycopersicum HOM05D006136 ORTHO05D007244 1.8e-09 69.3 254 28.3


User provided reference genes

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