Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0111s0056 Marchantia polymorpha HOM05D006371 ORTHO05D008309 0.0e+00 2671.0 1429 100.0
AagrBONN_evm.TU.Sc2ySwM_368.983 Anthoceros agrestis HOM05D006371 ORTHO05D008309 1.0e-202 711.8 939 46.4
Pp3c4_14910 Physcomitrium patens HOM05D006371 ORTHO05D008309 3.0e-194 683.7 1249 39.7
BcaB06g26772 Brassica carinata HOM05D006371 ORTHO05D008309 4.5e-174 616.7 906 42.3
PGR031G1410 Punica granatum HOM05D006371 ORTHO05D008309 6.5e-173 612.8 926 41.8
PSO675G4792 Papaver somniferum HOM05D006371 ORTHO05D008309 1.1e-172 612.1 928 41.8
Duzib133G1082 Durio zibethinus HOM05D006371 ORTHO05D008309 3.2e-172 610.5 897 42.7
AL3G41970 Arabidopsis lyrata HOM05D006371 ORTHO05D008309 5.5e-172 609.8 896 42.4
Gorai.007G165100 Gossypium raimondii HOM05D006371 ORTHO05D008309 7.2e-172 609.4 895 43.0
CsaV3_2G010080 Cucumis sativus L. HOM05D006371 ORTHO05D008309 9.4e-172 609.0 908 42.1
PSO541G0072 Papaver somniferum HOM05D006371 ORTHO05D008309 9.4e-172 609.0 924 41.8
Sp3g23150 Schrenkiella parvula HOM05D006371 ORTHO05D008309 1.6e-171 608.2 916 42.1
MELO3C024185.2 Cucumis melo HOM05D006371 ORTHO05D008309 4.7e-171 606.7 907 41.3
Gohir.D11G154800 Gossypium hirsutum HOM05D006371 ORTHO05D008309 1.0e-170 605.5 895 42.9
THA.LOC104808834 Tarenaya hassleriana HOM05D006371 ORTHO05D008309 2.3e-170 604.4 916 42.5
BcaC06g35860 Brassica carinata HOM05D006371 ORTHO05D008309 3.0e-170 604.0 903 42.1
Ca_05557_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 3.0e-170 604.0 904 41.9
A07p06760 Brassica napus HOM05D006371 ORTHO05D008309 5.2e-170 603.2 897 42.7
ATR0751G221 Amborella trichopoda HOM05D006371 ORTHO05D008309 8.8e-170 602.4 1014 40.0
Gohir.A11G148000 Gossypium hirsutum HOM05D006371 ORTHO05D008309 1.5e-169 601.7 922 42.8
C07p10340 Brassica napus HOM05D006371 ORTHO05D008309 3.3e-169 600.5 904 42.0
BraA07t28469Z Brassica rapa HOM05D006371 ORTHO05D008309 3.3e-169 600.5 904 42.5
Ciclev10014166m.g Citrus clementina HOM05D006371 ORTHO05D008309 4.4e-169 600.1 908 41.7
BolC7t41483H Brassica oleracea HOM05D006371 ORTHO05D008309 7.4e-169 599.4 904 42.0
Duzib211G0069 Durio zibethinus HOM05D006371 ORTHO05D008309 9.7e-169 599.0 907 41.6
Psat2g060760 Pisum sativum HOM05D006371 ORTHO05D008309 2.2e-168 597.8 902 41.7
arahy.Tifrunner.gnm1.ann1.YIC3VW Arachis hypogaea HOM05D006371 ORTHO05D008309 4.8e-168 596.7 898 42.3
Manes.12G064500 Manihot esculenta HOM05D006371 ORTHO05D008309 4.8e-168 596.7 940 41.8
Carub.0003s2599 Capsella rubella HOM05D006371 ORTHO05D008309 6.3e-168 596.3 889 42.3
MD09G1130200 Malus domestica HOM05D006371 ORTHO05D008309 6.3e-168 596.3 915 41.5
Nn1g07560 Nelumbo nucifera HOM05D006371 ORTHO05D008309 6.3e-168 596.3 926 41.5
arahy.Tifrunner.gnm1.ann1.BM1T67 Arachis hypogaea HOM05D006371 ORTHO05D008309 1.8e-167 594.7 898 42.2
Thhalv10002385m.g Eutrema salsugineum HOM05D006371 ORTHO05D008309 1.8e-167 594.7 901 42.3
CANSAT64G2089 Cannabis sativa HOM05D006371 ORTHO05D008309 3.1e-167 594.0 949 40.0
Glyma.14G190200 Glycine max HOM05D006371 ORTHO05D008309 7.0e-167 592.8 900 42.3
CARHR102110 Cardamine hirsuta HOM05D006371 ORTHO05D008309 9.1e-167 592.4 891 42.2
Lalb_Chr04g0252451 Lupinus albus HOM05D006371 ORTHO05D008309 1.2e-166 592.0 938 41.4
FAN14G0004 Fragaria x ananassa HOM05D006371 ORTHO05D008309 2.0e-166 591.3 922 41.5
GSVIVG01030124001 Vitis vinifera HOM05D006371 ORTHO05D008309 2.6e-166 590.9 883 41.6
FvH4_6g40410 Fragaria vesca HOM05D006371 ORTHO05D008309 3.5e-166 590.5 922 41.5
FAN05G5438 Fragaria x ananassa HOM05D006371 ORTHO05D008309 7.7e-166 589.3 916 41.0
LjContig00155g0006571 Lotus japonicus HOM05D006371 ORTHO05D008309 7.7e-166 589.3 902 41.9
QL04p067039 Quercus lobata HOM05D006371 ORTHO05D008309 1.7e-165 588.2 927 40.0
FAN02G4613 Fragaria x ananassa HOM05D006371 ORTHO05D008309 3.8e-165 587.0 912 41.3
Potri.014G170300 Populus trichocarpa HOM05D006371 ORTHO05D008309 5.0e-165 586.6 912 40.7
Sabra14G0129800 Salix brachista HOM05D006371 ORTHO05D008309 5.0e-165 586.6 908 41.4
Eucgr.A01367 Eucalyptus grandis HOM05D006371 ORTHO05D008309 1.5e-164 585.1 953 40.9
FAN09G0519 Fragaria x ananassa HOM05D006371 ORTHO05D008309 1.9e-164 584.7 917 40.6
CiPaw.03G283700 Carya illinoinensis HOM05D006371 ORTHO05D008309 3.2e-164 583.9 930 40.5
Cfa014202 Carpinus fangiana HOM05D006371 ORTHO05D008309 5.5e-164 583.2 940 40.0
Prupe.3G194900 Prunus persica HOM05D006371 ORTHO05D008309 5.5e-164 583.2 927 40.1
TWI36G0955 Tripterygium wilfordii HOM05D006371 ORTHO05D008309 9.4e-164 582.4 913 41.5
Aa31sc575G10 Aethionema arabicum HOM05D006371 ORTHO05D008309 8.0e-163 579.3 902 41.2
RcHm_v2.0_Chr2g0155641 Rosa chinensis HOM05D006371 ORTHO05D008309 8.0e-163 579.3 920 40.5
Glyma.02G223400 Glycine max HOM05D006371 ORTHO05D008309 4.0e-162 577.0 899 41.4
EL10Ac6g13348 Beta vulgaris HOM05D006371 ORTHO05D008309 1.5e-161 575.1 704 47.0
HPP92_003032 Vanilla planifolia HOM05D006371 ORTHO05D008309 2.0e-161 574.7 928 40.0
TAR627G0565 Trochodendron aralioides HOM05D006371 ORTHO05D008309 1.7e-160 571.6 879 41.9
Actinidia02362 Actinidia chinensis HOM05D006371 ORTHO05D008309 4.8e-160 570.1 681 48.6
Aqoxy3G02224 Aquilegia oxysepala HOM05D006371 ORTHO05D008309 2.4e-159 567.8 909 41.6
Sc07g0001260 Simmondsia chinensis HOM05D006371 ORTHO05D008309 1.6e-158 565.1 705 47.7
TPR.G13852 Trifolium pratense HOM05D006371 ORTHO05D008309 1.6e-158 565.1 945 40.1
Ah.02g129050 Amaranthus hybridus HOM05D006371 ORTHO05D008309 2.0e-158 564.7 730 46.4
CSS0032100 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 2.0e-158 564.7 846 41.8
Os08g0323600 Oryza sativa ssp. japonica HOM05D006371 ORTHO05D008309 4.5e-158 563.5 1035 36.7
AUR62040011 Chenopodium quinoa HOM05D006371 ORTHO05D008309 3.2e-156 557.4 684 46.8
AUR62039632 Chenopodium quinoa HOM05D006371 ORTHO05D008309 9.4e-156 555.8 738 45.1
Sed0018275 Sechium edule HOM05D006371 ORTHO05D008309 1.2e-155 555.4 720 46.1
AT2G04270 Arabidopsis thaliana HOM05D006371 ORTHO05D008309 1.6e-155 555.1 621 51.2
Dinv40160 Davidia involucrata HOM05D006371 ORTHO05D008309 2.1e-155 554.7 727 45.4
Migut.D00896 Erythranthe guttata HOM05D006371 ORTHO05D008309 4.7e-155 553.5 715 47.4
SalBow7G3887 Salvia bowleyana HOM05D006371 ORTHO05D008309 1.0e-154 552.4 721 46.2
Cc07_g11500 Coffea canephora HOM05D006371 ORTHO05D008309 2.0e-153 548.1 697 47.1
SMO117G0275 Selaginella moellendorffii HOM05D006371 ORTHO05D008309 7.5e-153 546.2 552 55.8
CAN.G890.8 Capsicum annuum HOM05D006371 ORTHO05D008309 2.2e-152 544.7 669 49.0
Solyc02g083140.3 Solanum lycopersicum HOM05D006371 ORTHO05D008309 3.7e-152 543.9 631 51.7
Sopen02g027900 Solanum pennellii HOM05D006371 ORTHO05D008309 8.3e-152 542.7 631 51.7
COL.COLO4_19652 Corchorus olitorius HOM05D006371 ORTHO05D008309 1.4e-151 542.0 852 41.5
Dinv08538 Davidia involucrata HOM05D006371 ORTHO05D008309 2.4e-151 541.2 887 40.9
PGSC0003DMG400001545 Solanum tuberosum HOM05D006371 ORTHO05D008309 1.2e-150 538.9 655 50.1
Lj4C228G6 Lonicera japonica HOM05D006371 ORTHO05D008309 1.6e-150 538.5 660 47.0
Thecc.01G199300 Theobroma cacao HOM05D006371 ORTHO05D008309 1.3e-149 535.4 910 39.6
MSTRG.10896 Avicennia marina HOM05D006371 ORTHO05D008309 2.8e-147 527.7 698 46.3
Zm00001eb038720 Zea mays HOM05D006371 ORTHO05D008309 1.8e-146 525.0 667 48.0
ECA238G3451 Erigeron canadensis HOM05D006371 ORTHO05D008309 4.0e-146 523.9 695 46.5
Medtr5g069430 Medicago truncatula HOM05D006371 ORTHO05D008309 4.0e-146 523.9 924 38.6
Lsat_1_v5_gn_4_142580 Lactuca sativa HOM05D006371 ORTHO05D008309 1.5e-145 521.9 741 44.3
HanXRQChr09g0256951 Helianthus annuus HOM05D006371 ORTHO05D008309 1.3e-144 518.8 725 45.2
ECA232G0409 Erigeron canadensis HOM05D006371 ORTHO05D008309 3.7e-144 517.3 776 42.1
Peaxi162Scf00300g00515 Petunia axillaris HOM05D006371 ORTHO05D008309 3.3e-140 504.2 774 41.6
Hund03659 Selenicereus undatus HOM05D006371 ORTHO05D008309 4.3e-140 503.8 631 46.9
Nitab4.5_0005413g0050 Nicotiana tabacum HOM05D006371 ORTHO05D008309 9.5e-140 502.7 642 46.4
SGA_v2.0_scaffold68G22808 Striga asiatica HOM05D006371 ORTHO05D008309 5.2e-138 496.9 728 43.8
Cpa.g.sc136.51 Carica papaya HOM05D006371 ORTHO05D008309 6.4e-136 490.0 510 53.7
MBI15_g38530_MAGBIO Magnolia biondii HOM05D006371 ORTHO05D008309 5.4e-127 460.3 792 39.3
Hund03661 Selenicereus undatus HOM05D006371 ORTHO05D008309 7.8e-126 456.4 692 42.8
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 9.5e-124 449.5 645 43.4
ClCG02G003000 Citrullus lanatus HOM05D006371 ORTHO05D008309 3.6e-123 447.6 775 38.5
Phvul.008G190000 Phaseolus vulgaris HOM05D006371 ORTHO05D008309 3.4e-121 441.0 744 39.4
Oeu049652.2 Olea europaea HOM05D006371 ORTHO05D008309 6.6e-117 426.8 806 37.7
CDE02G2282 Ceratophyllum demersum HOM05D006371 ORTHO05D008309 9.9e-113 412.9 761 37.6
vmacro20507 Vaccinium macrocarpon HOM05D006371 ORTHO05D008309 1.5e-105 389.0 821 36.3
Hma1.2p1_0315F.1_g122770 Hydrangea macrophylla HOM05D006371 ORTHO05D008309 5.6e-100 370.5 546 43.8
Nitab4.5_0023804g0010 Nicotiana tabacum HOM05D006371 ORTHO05D008309 4.5e-97 360.9 466 45.3
DCAR_023137 Daucus carota HOM05D006371 ORTHO05D008309 2.4e-95 355.1 559 41.7
Atru.chr6.3429 Acer truncatum HOM05D006371 ORTHO05D008309 1.2e-94 352.8 702 35.2
Rhsim10G0203500 Rhododendron simsii HOM05D006371 ORTHO05D008309 1.3e-93 349.4 633 36.7
Haze_12588 Corylus avellana HOM05D006371 ORTHO05D008309 2.1e-78 298.9 652 33.6
SEGI_21719 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 6.7e-61 240.7 214 57.5
Ca_28887_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 1.2e-54 219.9 412 32.3
Haze_12589 Corylus avellana HOM05D006371 ORTHO05D008309 9.7e-52 210.3 261 47.1
MCO12G287 Micromonas commoda HOM05D006371 ORTHO05D008309 7.2e-47 194.1 321 34.3
AUR62026198 Chenopodium quinoa HOM05D006371 ORTHO05D008309 2.2e-35 156.0 191 42.9
MD17G1105600 Malus domestica HOM05D006371 ORTHO05D008309 8.3e-27 127.5 212 39.2
CBR_g28922 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-25 123.6 266 36.5
CBR_g28919 Chara braunii HOM05D006371 ORTHO05D000048 3.5e-25 122.1 114 52.6
SEGI_30134 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 4.9e-19 101.7 551 27.8
CBR_g28910 Chara braunii HOM05D000019 ORTHO05D000048 1.6e-17 96.7 91 53.8
SEGI_19700 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 6.0e-17 94.7 89 50.6
SMO114G0038 Selaginella moellendorffii HOM05D049927 ORTHO05D375387 2.7e-09 69.3 93 48.4
SMO117G0073 Selaginella moellendorffii HOM05D049927 ORTHO05D376019 3.5e-09 68.9 117 41.9
AUR62026199 Chenopodium quinoa HOM05D000691 ORTHO05D000378 5.1e-08 65.1 52 61.5


User provided reference genes

Program Settings