Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 1.1e-118 430.3 251 100.0
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 3.5e-90 335.5 251 76.1
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 1.0e-89 334.0 251 75.7
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 3.5e-82 308.9 253 73.9
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 2.3e-81 306.2 254 74.4
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 9.6e-80 300.8 251 74.1
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 2.8e-79 299.3 251 71.7
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 4.8e-79 298.5 253 73.1
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 2.4e-78 296.2 263 68.8
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 9.0e-78 294.3 252 70.6
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 3.4e-77 292.4 253 68.8
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 5.8e-77 291.6 252 69.8
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 5.8e-77 291.6 264 69.3
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 7.6e-77 291.2 253 68.4
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 1.3e-76 290.4 253 68.8
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.7e-76 290.0 253 68.8
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 8.4e-76 287.7 252 69.0
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 3.2e-75 285.8 251 70.5
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 3.2e-75 285.8 255 71.4
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 1.2e-74 283.9 253 66.4
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 3.5e-74 282.3 253 70.4
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 6.0e-74 281.6 262 68.3
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 1.8e-73 280.0 255 70.6
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 3.0e-73 279.3 258 63.6
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 3.0e-73 279.3 251 71.3
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 4.3e-72 275.4 252 69.8
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 5.7e-72 275.0 256 64.8
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 7.4e-72 274.6 259 61.8
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 1.3e-71 273.9 251 68.9
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 1.6e-71 273.5 251 68.9
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 4.8e-71 271.9 253 67.2
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 3.1e-70 269.2 253 69.2
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 1.2e-69 267.3 263 61.6
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 1.5e-69 266.9 254 67.7
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 2.0e-69 266.5 250 66.0
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 2.0e-69 266.5 250 66.0
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 2.6e-69 266.2 264 64.8
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 3.4e-69 265.8 250 60.8
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 4.5e-69 265.4 250 65.6
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 7.6e-69 264.6 260 65.8
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 1.0e-68 264.2 251 65.7
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 5.0e-68 261.9 250 70.0
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 8.4e-68 261.2 263 63.5
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 1.1e-67 260.8 264 64.8
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 1.1e-67 260.8 263 61.2
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 1.4e-67 260.4 264 62.1
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 2.5e-67 259.6 250 65.2
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 4.2e-67 258.8 253 65.2
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 9.3e-67 257.7 263 60.5
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 1.2e-66 257.3 252 65.5
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 2.7e-66 256.1 294 59.2
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 7.9e-66 254.6 252 64.3
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 1.3e-65 253.8 251 66.1
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 2.5e-64 249.6 295 51.5
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 3.3e-64 249.2 263 62.4
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 4.3e-64 248.8 258 61.6
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 7.4e-64 248.1 250 64.4
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 2.8e-63 246.1 291 51.9
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 3.7e-63 245.7 273 61.2
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 2.4e-62 243.0 249 64.3
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 4.1e-62 242.3 251 58.6
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 5.3e-62 241.9 262 60.3
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 6.9e-62 241.5 254 62.2
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 3.4e-61 239.2 250 62.0
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 3.4e-61 239.2 252 58.3
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 7.7e-61 238.0 263 62.7
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 1.3e-60 237.3 263 55.9
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 1.3e-60 237.3 263 55.9
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 1.7e-60 236.9 252 57.5
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 6.5e-60 235.0 252 59.5
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 8.5e-60 234.6 256 61.7
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 1.4e-59 233.8 260 60.4
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 2.1e-58 229.9 250 64.0
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 2.7e-58 229.6 248 61.3
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 1.1e-56 224.2 253 55.3
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 3.3e-56 222.6 253 56.1
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 9.7e-56 221.1 262 59.9
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 1.3e-55 220.7 250 55.2
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 1.3e-55 220.7 251 55.0
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 2.2e-55 219.9 252 58.3
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 2.2e-55 219.9 250 58.4
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 1.1e-54 217.6 253 60.1
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.8e-54 216.9 288 53.8
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 2.4e-54 216.5 247 56.3
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 1.2e-53 214.2 252 60.3
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 4.5e-53 212.2 252 57.1
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 1.3e-52 210.7 262 58.4
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 5.5e-51 205.3 268 54.1
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 7.9e-50 201.4 205 66.8
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 1.4e-49 200.7 249 51.0
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 3.0e-49 199.5 260 51.5
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 8.8e-49 198.0 257 49.0
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 9.7e-40 167.9 251 52.6
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 9.1e-38 161.4 299 44.5
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 2.0e-37 160.2 241 45.6
TAR628G0388 Trochodendron aralioides HOM05D006779 ORTHO05D008491 2.9e-36 156.4 111 74.8
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 1.5e-35 154.1 206 52.9
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.8e-33 147.1 156 61.5
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 3.0e-33 146.4 288 41.3
Cpa.g.sc62.36 Carica papaya HOM05D006779 ORTHO05D008491 4.0e-33 146.0 100 75.0
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 3.1e-30 136.3 213 53.5
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 7.7e-29 131.7 292 41.4
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.7e-28 130.6 189 47.1
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 6.5e-28 128.6 189 47.1
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 8.5e-28 128.3 273 39.2
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 3.2e-27 126.3 152 60.5
CBR_g17671 Chara braunii HOM05D006779 ORTHO05D008491 1.2e-26 124.4 337 35.3
TPR.G23511 Trifolium pratense HOM05D006779 ORTHO05D008491 8.8e-25 118.2 70 84.3
Os06g0215200 Oryza sativa ssp. japonica HOM05D006779 ORTHO05D008491 3.7e-23 112.8 70 77.1
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 6.3e-23 112.1 153 55.6
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 4.5e-21 105.9 250 37.6
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 5.6e-19 99.0 200 46.5
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 9.5e-19 98.2 181 43.1
TAR628G1516 Trochodendron aralioides HOM05D006779 ORTHO05D008491 2.4e-14 83.6 120 50.8
CSS0034996 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.2e-13 81.3 189 37.0
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.0e-12 78.2 151 39.1
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.0e-12 78.2 151 39.1
EL10Ac9g20940 Beta vulgaris HOM05D002686 ORTHO05D003222 1.5e-08 64.3 77 55.8
MD10G1090400 Malus domestica HOM05D006779 ORTHO05D008491 2.0e-08 63.9 108 49.1
Ah.08g219340 Amaranthus hybridus HOM05D006779 ORTHO05D008491 8.3e-07 58.5 93 47.3


User provided reference genes

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