Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G011696 Manihot esculenta HOM05D004102 ORTHO05D005307 9.4e-116 420.2 217 100.0
Manes.12G032800 Manihot esculenta HOM05D004102 ORTHO05D005307 1.1e-113 413.3 216 98.6
Ciclev10024065m.g Citrus clementina HOM05D004102 ORTHO05D005307 7.7e-94 347.4 209 83.7
Ca_09679_v3 Cicer arietinum L. HOM05D004102 ORTHO05D005307 1.5e-92 343.2 214 80.8
Cpa.g.sc50.12 Carica papaya HOM05D004102 ORTHO05D005307 2.1e-91 339.3 210 81.9
Prupe.8G223100 Prunus persica HOM05D004102 ORTHO05D005307 2.8e-91 339.0 206 83.0
MD05G1196500 Malus domestica HOM05D004102 ORTHO05D005307 5.7e-89 331.3 208 80.3
MD10G1183700 Malus domestica HOM05D004102 ORTHO05D005307 4.9e-88 328.2 208 79.3
Medtr1g069910 Medicago truncatula HOM05D004102 ORTHO05D005307 2.7e-86 322.4 210 77.6
TPR.G24001 Trifolium pratense HOM05D004102 ORTHO05D005307 1.0e-85 320.5 214 75.2
Peaxi162Scf00855g00004 Petunia axillaris HOM05D004102 ORTHO05D005307 5.6e-84 314.7 214 72.9
arahy.Tifrunner.gnm1.ann1.3W1S0R Arachis hypogaea HOM05D004102 ORTHO05D005307 1.2e-83 313.5 208 75.5
vmacro02666 Vaccinium macrocarpon HOM05D004102 ORTHO05D005307 1.2e-83 313.5 214 74.8
arahy.Tifrunner.gnm1.ann1.KRWI3G Arachis hypogaea HOM05D004102 ORTHO05D005307 2.8e-83 312.4 208 75.0
Rhsim13G0035400 Rhododendron simsii HOM05D004102 ORTHO05D005307 8.0e-83 310.8 216 74.1
Sp5g07780 Schrenkiella parvula HOM05D004102 ORTHO05D005307 6.8e-82 307.8 206 75.7
Potri.005G224900 Populus trichocarpa HOM05D004102 ORTHO05D005307 8.9e-82 307.4 214 75.2
Cfa002432 Carpinus fangiana HOM05D004102 ORTHO05D005307 1.5e-81 306.6 208 75.5
Psat6g041920 Pisum sativum HOM05D004102 ORTHO05D005307 7.5e-81 304.3 208 74.0
TAR362G0337 Trochodendron aralioides HOM05D004102 ORTHO05D005307 1.3e-80 303.5 216 73.6
Dinv34632 Davidia involucrata HOM05D004102 ORTHO05D005307 4.9e-80 301.6 205 75.1
RcHm_v2.0_Chr6g0287971 Rosa chinensis HOM05D004102 ORTHO05D005307 4.9e-80 301.6 192 78.6
Duzib133G0778 Durio zibethinus HOM05D004102 ORTHO05D005307 8.3e-80 300.8 186 82.3
CiPaw.03G264900 Carya illinoinensis HOM05D004102 ORTHO05D005307 1.4e-79 300.1 187 81.3
Sed0028046 Sechium edule HOM05D004102 ORTHO05D005307 7.0e-79 297.7 210 72.9
AUR62011867 Chenopodium quinoa HOM05D004102 ORTHO05D005307 9.2e-79 297.4 211 71.1
Thecc.01G257700 Theobroma cacao HOM05D004102 ORTHO05D005307 9.2e-79 297.4 182 83.0
FAN20G2335 Fragaria x ananassa HOM05D004102 ORTHO05D005307 1.2e-78 297.0 189 78.3
EL10As5g23471 Beta vulgaris HOM05D004102 ORTHO05D005307 4.6e-78 295.0 211 69.7
FvH4_2g21371 Fragaria vesca HOM05D004102 ORTHO05D005307 6.0e-78 294.7 189 77.8
FAN15G3235 Fragaria x ananassa HOM05D004102 ORTHO05D005307 6.0e-78 294.7 189 77.8
Actinidia07299 Actinidia chinensis HOM05D004102 ORTHO05D005307 1.3e-77 293.5 193 76.2
FAN24G0573 Fragaria x ananassa HOM05D004102 ORTHO05D005307 1.7e-77 293.1 189 77.2
Gohir.A07G213200 Gossypium hirsutum HOM05D004102 ORTHO05D005307 1.7e-77 293.1 186 80.1
Gohir.D07G219350 Gossypium hirsutum HOM05D004102 ORTHO05D005307 1.7e-77 293.1 186 80.1
Gorai.001G253800 Gossypium raimondii HOM05D004102 ORTHO05D005307 1.7e-77 293.1 186 80.1
AUR62024710 Chenopodium quinoa HOM05D004102 ORTHO05D005307 3.0e-77 292.4 211 69.7
Duzib138G0514 Durio zibethinus HOM05D004102 ORTHO05D005307 3.0e-77 292.4 186 80.6
QL09p038937 Quercus lobata HOM05D004102 ORTHO05D005307 3.9e-77 292.0 216 71.3
Solyc06g083870.3 Solanum lycopersicum HOM05D004102 ORTHO05D005307 5.0e-77 291.6 207 71.5
Sopen06g035270 Solanum pennellii HOM05D004102 ORTHO05D005307 5.0e-77 291.6 207 71.5
COL.COLO4_03878 Corchorus olitorius HOM05D004102 ORTHO05D005307 8.6e-77 290.8 186 78.5
COL.COLO4_04038 Corchorus olitorius HOM05D004102 ORTHO05D005307 8.6e-77 290.8 186 78.5
CsaV3_7G026800 Cucumis sativus L. HOM05D004102 ORTHO05D005307 8.6e-77 290.8 213 68.5
Lj1A67T41 Lonicera japonica HOM05D004102 ORTHO05D005307 8.6e-77 290.8 191 78.0
MBI07_g16928_MAGBIO Magnolia biondii HOM05D004102 ORTHO05D005307 1.5e-76 290.0 202 74.3
Lj5g0004279 Lotus japonicus HOM05D004102 ORTHO05D005307 2.5e-76 289.3 213 70.4
Glyma.10G037300 Glycine max HOM05D004102 ORTHO05D005307 3.3e-76 288.9 207 72.9
Lalb_Chr06g0170461 Lupinus albus HOM05D004102 ORTHO05D005307 3.3e-76 288.9 210 72.4
TWI18G1245 Tripterygium wilfordii HOM05D004102 ORTHO05D005307 4.3e-76 288.5 186 76.9
Sabra05G0173500 Salix brachista HOM05D004102 ORTHO05D005307 5.6e-76 288.1 210 72.4
ClCG09G008240 Citrullus lanatus HOM05D004102 ORTHO05D005307 7.3e-76 287.7 210 70.5
ATR0827G146 Amborella trichopoda HOM05D004102 ORTHO05D005307 1.2e-75 287.0 211 66.8
PGR031G2496 Punica granatum HOM05D004102 ORTHO05D005307 1.2e-75 287.0 206 73.8
SHI09770 Sapria himalayana HOM05D004102 ORTHO05D005307 1.2e-75 287.0 219 69.4
Glyma.13G123700 Glycine max HOM05D004102 ORTHO05D005307 1.6e-75 286.6 207 72.5
Eucgr.B01550 Eucalyptus grandis HOM05D004102 ORTHO05D005307 3.6e-75 285.4 206 72.3
MELO3C012730.2 Cucumis melo HOM05D004102 ORTHO05D005307 8.1e-75 284.3 210 70.0
Phvul.007G192600 Phaseolus vulgaris HOM05D004102 ORTHO05D005307 8.9e-74 280.8 207 70.5
Aqoxy5G00226 Aquilegia oxysepala HOM05D004102 ORTHO05D005307 2.0e-73 279.6 214 68.7
AL5G35750 Arabidopsis lyrata HOM05D004102 ORTHO05D005307 2.0e-73 279.6 206 69.4
Hma1.2p1_0273F.1_g109650 Hydrangea macrophylla HOM05D004102 ORTHO05D005307 2.0e-73 279.6 191 75.9
AT3G54670 Arabidopsis thaliana HOM05D004102 ORTHO05D005307 2.6e-73 279.3 206 69.4
THA.LOC104798817 Tarenaya hassleriana HOM05D004102 ORTHO05D005307 3.4e-73 278.9 209 69.4
Nitab4.5_0006457g0030 Nicotiana tabacum HOM05D004102 ORTHO05D005307 7.5e-73 277.7 287 53.7
MSTRG.12532 Avicennia marina HOM05D004102 ORTHO05D005307 9.8e-73 277.3 215 66.0
Nitab4.5_0000470g0060 Nicotiana tabacum HOM05D004102 ORTHO05D005307 1.3e-72 276.9 287 53.7
A09p47620 Brassica napus HOM05D004102 ORTHO05D005307 2.2e-72 276.2 206 68.0
C08p29820 Brassica napus HOM05D004102 ORTHO05D005307 2.2e-72 276.2 206 68.0
BolC8t50593H Brassica oleracea HOM05D004102 ORTHO05D005307 2.2e-72 276.2 206 68.0
BraA09t40218Z Brassica rapa HOM05D004102 ORTHO05D005307 2.2e-72 276.2 206 68.0
CAN.G771.28 Capsicum annuum HOM05D004102 ORTHO05D005307 2.2e-72 276.2 195 70.8
SGA_v2.0_scaffold2G00877 Striga asiatica HOM05D004102 ORTHO05D005307 2.9e-72 275.8 216 65.3
CARHR164590 Cardamine hirsuta HOM05D004102 ORTHO05D005307 3.7e-72 275.4 206 68.4
Aa31sc35G50 Aethionema arabicum HOM05D004102 ORTHO05D005307 1.1e-71 273.9 208 67.8
DCAR_005687 Daucus carota HOM05D004102 ORTHO05D005307 2.4e-71 272.7 189 74.1
Migut.N02206 Erythranthe guttata HOM05D004102 ORTHO05D005307 3.2e-71 272.3 216 65.3
Medtr0003s0460 Medicago truncatula HOM05D004102 ORTHO05D005307 4.1e-71 271.9 211 68.2
Thhalv10010074m.g Eutrema salsugineum HOM05D004102 ORTHO05D005307 7.1e-71 271.2 208 66.3
QL09p038899 Quercus lobata HOM05D004102 ORTHO05D005307 9.2e-71 270.8 185 75.7
C03p53990 Brassica napus HOM05D004102 ORTHO05D005307 1.3e-69 266.9 207 66.7
BolC3t17695H Brassica oleracea HOM05D004102 ORTHO05D005307 1.3e-69 266.9 208 65.9
CDE03G0492 Ceratophyllum demersum HOM05D004102 ORTHO05D005307 3.9e-69 265.4 214 64.0
Ah.11g049770 Amaranthus hybridus HOM05D004102 ORTHO05D005307 2.5e-68 262.7 176 73.9
SEGI_02214 Sequoiadendron giganteum HOM05D004102 ORTHO05D005307 3.3e-68 262.3 217 65.0
Lj2g0002321 Lotus japonicus HOM05D004102 ORTHO05D005307 7.3e-68 261.2 213 65.7
Hund02916 Selenicereus undatus HOM05D004102 ORTHO05D005307 1.2e-67 260.4 175 73.1
ECA236G1622 Erigeron canadensis HOM05D004102 ORTHO05D005307 1.6e-67 260.0 208 63.9
Oeu025851.5 Olea europaea HOM05D004102 ORTHO05D005307 2.1e-67 259.6 201 65.2
Cc01_g18300 Coffea canephora HOM05D004102 ORTHO05D005307 2.8e-67 259.2 200 67.0
Gohir.A07G213150 Gossypium hirsutum HOM05D004102 ORTHO05D005307 2.3e-66 256.1 186 74.2
Lsat_1_v5_gn_8_92740 Lactuca sativa HOM05D004102 ORTHO05D005307 3.1e-66 255.8 194 66.5
Peaxi162Scf00013g01122 Petunia axillaris HOM05D004102 ORTHO05D005307 4.0e-66 255.4 187 69.5
Zm00001eb038490 Zea mays HOM05D004102 ORTHO05D005307 1.2e-65 253.8 214 58.9
Atru.chr5.1694 Acer truncatum HOM05D004102 ORTHO05D005307 2.6e-65 252.7 208 65.9
Carub.0005s2127 Capsella rubella HOM05D004102 ORTHO05D005307 1.7e-64 250.0 185 67.0
C04p37830 Brassica napus HOM05D004102 ORTHO05D005307 3.8e-64 248.8 184 69.0
BolC4t25359H Brassica oleracea HOM05D004102 ORTHO05D005307 3.8e-64 248.8 184 69.0
Pp3c12_10030 Physcomitrium patens HOM05D004102 ORTHO05D005307 1.1e-63 247.3 219 60.3
Nn3g19665 Nelumbo nucifera HOM05D004102 ORTHO05D005307 2.4e-63 246.1 192 65.6
A03p43760 Brassica napus HOM05D004102 ORTHO05D005307 3.2e-63 245.7 204 64.2
BraA03t13511Z Brassica rapa HOM05D004102 ORTHO05D005307 3.2e-63 245.7 204 64.2
CSS0001085 Camellia sinensis var. sinensis HOM05D004102 ORTHO05D005307 3.2e-63 245.7 182 69.2
HanXRQChr02g0038071 Helianthus annuus HOM05D004102 ORTHO05D005307 4.1e-63 245.4 192 64.6
CBR_g38548 Chara braunii HOM05D004102 ORTHO05D005307 4.6e-62 241.9 206 60.2
PSO832G3143 Papaver somniferum HOM05D004102 ORTHO05D005307 2.3e-61 239.6 180 67.8
AagrBONN_evm.TU.Sc2ySwM_344.1414__1415 Anthoceros agrestis HOM05D004102 ORTHO05D005307 3.0e-61 239.2 217 58.1
CANSAT01G2283 Cannabis sativa HOM05D004102 ORTHO05D005307 1.1e-60 237.3 186 63.4
PSO210G1261 Papaver somniferum HOM05D004102 ORTHO05D005307 3.3e-60 235.7 177 67.8
Lsat_1_v5_gn_4_2320 Lactuca sativa HOM05D004102 ORTHO05D005307 6.2e-59 231.5 185 62.7
PGSC0003DMG400020146 Solanum tuberosum HOM05D004102 ORTHO05D005307 1.4e-58 230.3 160 71.2
HPP92_014764 Vanilla planifolia HOM05D004102 ORTHO05D005307 1.4e-58 230.3 202 58.9
Haze_24638 Corylus avellana HOM05D004102 ORTHO05D005307 2.4e-58 229.6 325 46.2
TPR.G24939 Trifolium pratense HOM05D004102 ORTHO05D005307 2.4e-58 229.6 214 57.0
Sc17g0000640 Simmondsia chinensis HOM05D004102 ORTHO05D005307 2.4e-55 219.5 185 61.6
unitig_37.g12599 Utricularia gibba HOM05D001236 ORTHO05D005307 4.2e-55 218.8 221 54.3
PRCOL_00005438 Prasinoderma coloniale HOM05D004102 ORTHO05D005307 2.1e-38 163.3 216 43.1
MCO11G672 Micromonas commoda HOM05D004102 ORTHO05D005307 3.7e-35 152.5 251 34.3
Mapoly0107s0024 Marchantia polymorpha HOM05D004102 ORTHO05D005307 4.5e-33 145.6 141 55.3
Cre15.g635800 Chlamydomonas reinhardtii HOM05D004102 ORTHO05D005307 4.2e-23 112.5 149 40.9
Cfa024809 Carpinus fangiana HOM05D004102 ORTHO05D005307 2.7e-22 109.8 229 33.2
Migut.M01725 Erythranthe guttata HOM05D004102 ORTHO05D005307 1.9e-20 103.6 145 42.1
Haze_26530 Corylus avellana HOM05D004102 ORTHO05D005307 2.6e-12 76.6 132 34.8
AagrBONN_evm.TU.Sc2ySwM_368.939 Anthoceros agrestis HOM05D003226 ORTHO05D005723 8.5e-08 61.6 128 28.9
Cre12.g493400 Chlamydomonas reinhardtii HOM05D003226 ORTHO05D005723 2.5e-07 60.1 211 24.6
AL8G21600 Arabidopsis lyrata HOM05D003226 ORTHO05D005723 5.5e-07 58.9 127 26.0
AT5G48600 Arabidopsis thaliana HOM05D003226 ORTHO05D005723 5.5e-07 58.9 127 26.0
arahy.Tifrunner.gnm1.ann1.R713I2 Arachis hypogaea HOM05D003226 ORTHO05D005723 5.5e-07 58.9 134 26.1
arahy.Tifrunner.gnm1.ann1.WKF5J8 Arachis hypogaea HOM05D003226 ORTHO05D005723 5.5e-07 58.9 134 26.1
Sopen02g032720 Solanum pennellii HOM05D003226 ORTHO05D005723 5.5e-07 58.9 127 26.8
Aqoxy6G02361 Aquilegia oxysepala HOM05D003226 ORTHO05D005723 7.2e-07 58.5 123 29.3
Solyc02g087980.3 Solanum lycopersicum HOM05D003226 ORTHO05D005723 7.2e-07 58.5 121 26.4
VMungo0464G1600 Vigna mungo HOM05D003226 ORTHO05D005723 9.4e-07 58.2 154 24.7
Carub.0005s0749 Capsella rubella HOM05D003226 ORTHO05D005723 1.2e-06 57.8 127 25.2
DCAR_008598 Daucus carota HOM05D004102 ORTHO05D005307 1.2e-06 57.8 43 69.8
Lj4g0003862 Lotus japonicus HOM05D003226 ORTHO05D005723 1.2e-06 57.8 114 27.2
Actinidia06098 Actinidia chinensis HOM05D003226 ORTHO05D005723 1.6e-06 57.4 145 24.8
Cpa.g.sc140.54 Carica papaya HOM05D003226 ORTHO05D005723 2.1e-06 57.0 177 23.7
Sp2g17560 Schrenkiella parvula HOM05D003226 ORTHO05D005723 2.1e-06 57.0 114 27.2
Zm00001eb291710 Zea mays HOM05D003226 ORTHO05D005723 2.1e-06 57.0 129 30.2
MCO09G434 Micromonas commoda HOM05D003226 ORTHO05D005723 2.7e-06 56.6 125 24.0
MELO3C022910.2 Cucumis melo HOM05D003226 ORTHO05D005723 3.6e-06 56.2 217 22.1
Lsat_1_v5_gn_3_101601 Lactuca sativa HOM05D003226 ORTHO05D005723 4.7e-06 55.8 128 25.8
Sc14g0005870 Simmondsia chinensis HOM05D003226 ORTHO05D005723 4.7e-06 55.8 158 24.7
ECA246G4217 Erigeron canadensis HOM05D003226 ORTHO05D005723 7.9e-06 55.1 128 25.8
HanXRQChr15g0473961 Helianthus annuus HOM05D003226 ORTHO05D005723 7.9e-06 55.1 163 25.8
Mapoly0189s0011 Marchantia polymorpha HOM05D003226 ORTHO05D005723 7.9e-06 55.1 121 25.6
Nn4g25634 Nelumbo nucifera HOM05D003226 ORTHO05D005723 7.9e-06 55.1 127 25.2
PSO017G5293 Papaver somniferum HOM05D003226 ORTHO05D005723 7.9e-06 55.1 114 26.3
PSO170G5698 Papaver somniferum HOM05D003226 ORTHO05D005723 7.9e-06 55.1 125 25.6
TAR381G0539 Trochodendron aralioides HOM05D003226 ORTHO05D005723 7.9e-06 55.1 116 25.9


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