Gene: Sopen02g032720

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g032720
  • Transcript Identifier Sopen02g032720.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 54395223-54404363 : positive

Gene Family Information

  • ID HOM05D003226
  • #Genes/#Species 212/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g032720.1

Descriptions

  • Description member of SMC subfamily | structural maintenance of chromosome 3 (SMC3) | FUNCTIONS IN: transporter activity, ATP binding | INVOLVED IN: chromosome segregation, chromosome organization | LOCATED IN: chromosome, nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: SMCs flexible hinge , RecF/RecN/SMC protein, N-terminal | BEST Arabidopsis thaliana protein match is: structural maintenance of chromosomes 2 ., RecF/RecN/SMC
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051276
IEA
InterProchromosome organization
GO:0007076
ISO
PLAZA Integrative Orthologymitotic chromosome condensation AT5G48600
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G48600
GO:0000070
ISO
PLAZA Integrative Orthologymitotic sister chromatid segregation AT5G48600

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005694
IEA
InterProchromosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041738 Structural maintenance of chromosomes 4, ABC domain, eukaryotic
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR036277 SMCs flexible hinge superfamily
IPR003395 RecF/RecN/SMC, N-terminal
IPR010935 SMCs flexible hinge
IPR024704 Structural maintenance of chromosomes protein
Mapman id Description
13.3.1.1.1 Cell cycle organisation.mitosis and meiosis.chromatin condensation.condensin I/II complex.component CAP-C/SMC4