Gene: Carub.0005s2127

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0005s2127
  • Transcript Identifier Carub.0005s2127.1
  • Gene Type Coding gene
  • Location scaffold_5 : 10416846-10424152 : positive

Gene Family Information

  • ID HOM05D004102
  • #Genes/#Species 172/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0005s2127.v1.1
  • pacid 39224190
  • synonym Carubv10019095m.g

Descriptions

  • Description K06636 - structural maintenance of chromosome 1 (SMC1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007064
IEA
InterPromitotic sister chromatid cohesion
GO:0051276
IEA
InterProchromosome organization
GO:0007062
ISO
PLAZA Integrative Orthologysister chromatid cohesion AT3G54670
GO:0007059
ISO
PLAZA Integrative Orthologychromosome segregation AT3G54670

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008278
IEA
InterProcohesin complex
GO:0005694
IEA
InterProchromosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024704 Structural maintenance of chromosomes protein
IPR028468 Smc1, ATP-binding cassette domain
IPR036277 SMCs flexible hinge superfamily
IPR010935 SMCs flexible hinge
IPR003395 RecF/RecN/SMC, N-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
13.3.4.1.1 Cell cycle organisation.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.component SMC1/TTN8