Gene: COL.COLO4_04038

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_04038
  • Transcript Identifier COL.rna2882
  • Gene Type Coding gene
  • Location AWUE01010922.1 : 65987-76015 : positive

Gene Family Information

  • ID HOM05D004102
  • #Genes/#Species 172/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna2882
  • GenBank OMP11111.1
  • id gene4011
  • gene_name COLO4_04038

Descriptions

  • Description RecF/RecN/SMC
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051276
IEA
InterProchromosome organization
GO:0007064
IEA
InterPromitotic sister chromatid cohesion
GO:0007062
ISO
PLAZA Integrative Orthologysister chromatid cohesion AT3G54670
GO:0007059
ISO
PLAZA Integrative Orthologychromosome segregation AT3G54670

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005694
IEA
InterProchromosome
GO:0008278
IEA
InterProcohesin complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036277 SMCs flexible hinge superfamily
IPR028468 Smc1, ATP-binding cassette domain
IPR010935 SMCs flexible hinge
IPR003395 RecF/RecN/SMC, N-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR024704 Structural maintenance of chromosomes protein
Mapman id Description
13.3.4.1.1 Cell cycle organisation.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.component SMC1/TTN8