Gene: Solyc02g087980.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g087980.3
  • Transcript Identifier Solyc02g087980.3.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 48243992-48253151 : positive

Gene Family Information

  • ID HOM05D003226
  • #Genes/#Species 212/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g087980.3.1
  • uniprot A0A3Q7F8Y3
  • gene_id Solyc02g087980

Descriptions

  • Description Structural maintenance of chromosomes protein (AHRD V3.3 *** A0A2G3ACB4_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051276
IEA
GOA Databasechromosome organization
GO:0051276
IEA
InterProchromosome organization
GO:0051321
IEA
GOA Databasemeiotic cell cycle
GO:0007076
IBA
GOA Databasemitotic chromosome condensation
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G48600
GO:0000070
ISO
PLAZA Integrative Orthologymitotic sister chromatid segregation AT5G48600

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005515
IEA
InterProprotein binding
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005694
IEA
GOA Databasechromosome
GO:0005694
IEA
InterProchromosome
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041738 Structural maintenance of chromosomes 4, ABC domain, eukaryotic
IPR010935 SMCs flexible hinge
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003395 RecF/RecN/SMC, N-terminal
IPR024704 Structural maintenance of chromosomes protein
IPR036277 SMCs flexible hinge superfamily
Mapman id Description
13.3.1.1.1 Cell cycle organisation.mitosis and meiosis.chromatin condensation.condensin I/II complex.component CAP-C/SMC4