Gene: AT3G54670

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G54670
  • Transcript Identifier AT3G54670.1
  • Gene Type Coding gene
  • Location Chr3 : 20235818-20243701 : positive

Gene Family Information

  • ID HOM05D004102
  • #Genes/#Species 172/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G54670.1
  • symbol TTN8
  • Alias ATSMC1,SMC1,STRUCTURAL MAINTENANCE OF CHROMOSOMES 1
  • full_name TITAN8
  • uniprot Q6Q1P4

Descriptions

  • Description Structural maintenance of chromosomes (SMC) family protein
  • Computational description TITAN8 (TTN8); FUNCTIONS IN: transporter activity, ATP binding; INVOLVED IN: sister chromatid cohesion, chromosome segregation; LOCATED IN: cohesin complex, nucleus, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SMCs flexible hinge (InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal (InterPro:IPR003395); BEST Arabidopsis thaliana protein match is: structural maintenance of chromosome 3 (TAIR:AT5G48600.1); Has 200429 Blast hits to 91047 proteins in 3650 species: Archae - 2506; Bacteria - 36447; Metazoa - 81443; Fungi - 15311; Plants - 9097; Viruses - 946; Other Eukaryotes - 54679 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007049
IEA
GOA Databasecell cycle
GO:0007064
IEA
Gene Ontologymitotic sister chromatid cohesion
GO:0007064
IEA
InterPromitotic sister chromatid cohesion
GO:0051276
IEA
GOA Databasechromosome organization
GO:0051276
IEA
InterProchromosome organization
GO:0051321
IEA
GOA Databasemeiotic cell cycle
GO:0051301
IEA
GOA Databasecell division
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0007062
IMP
IBA
Gene Ontologysister chromatid cohesion1 2
GO:0007059
IMP
Gene Ontologychromosome segregation3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003677
IBA
Gene OntologyDNA binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008278
IEA
GOA Databasecohesin complex
GO:0008278
ISS, IBA
Gene Ontologycohesin complex2 3
GO:0008278
IEA
InterProcohesin complex
GO:0005694
IEA
GOA Databasechromosome
GO:0005694
IEA
InterProchromosome
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR024704 Structural maintenance of chromosomes protein
IPR036277 SMCs flexible hinge superfamily
IPR028468 Smc1, ATP-binding cassette domain
IPR010935 SMCs flexible hinge
IPR003395 RecF/RecN/SMC, N-terminal
Mapman id Description
13.3.4.1.1 Cell cycle organisation.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.component SMC1/TTN8