Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C029137.2 Cucumis melo HOM05D001061 ORTHO05D006729 1.0e-128 463.4 232 100.0
MELO3C006901.2 Cucumis melo HOM05D001061 ORTHO05D006729 6.9e-40 168.3 92 90.2
CsaV3_3G017020 Cucumis sativus L. HOM05D001061 ORTHO05D006729 1.3e-38 164.1 92 88.0
ClCG05G007980 Citrullus lanatus HOM05D001061 ORTHO05D006729 3.2e-37 159.5 92 85.9
Sed0018541 Sechium edule HOM05D001061 ORTHO05D006729 1.4e-32 144.1 92 79.3
AUR62015994 Chenopodium quinoa HOM05D001061 ORTHO05D006729 5.3e-32 142.1 92 72.8
AUR62021201 Chenopodium quinoa HOM05D001061 ORTHO05D006729 1.2e-31 141.0 92 71.7
Hund11753 Selenicereus undatus HOM05D001061 ORTHO05D006729 4.5e-31 139.0 92 70.7
Hma1.2p1_2482F.1_g322970 Hydrangea macrophylla HOM05D001061 ORTHO05D006729 1.0e-30 137.9 92 68.5
Hma1.2p1_2482F.1_g322980 Hydrangea macrophylla HOM05D001061 ORTHO05D006729 1.0e-30 137.9 92 68.5
QL09p014380 Quercus lobata HOM05D001061 ORTHO05D006729 1.3e-30 137.5 92 71.7
Nn1g01435 Nelumbo nucifera HOM05D001061 ORTHO05D006729 1.7e-30 137.1 92 68.5
Hma1.2p1_3335F.1_g335330 Hydrangea macrophylla HOM05D001061 ORTHO05D006729 2.9e-30 136.3 92 68.5
Actinidia34106 Actinidia chinensis HOM05D001061 ORTHO05D006729 3.8e-30 136.0 92 69.6
Cfa008311 Carpinus fangiana HOM05D001061 ORTHO05D006729 1.4e-29 134.0 92 68.5
Haze_13724 Corylus avellana HOM05D001061 ORTHO05D006729 1.4e-29 134.0 92 68.5
Ah.07g207270 Amaranthus hybridus HOM05D001061 ORTHO05D006729 1.9e-29 133.7 92 70.7
EL10Ac3g05663 Beta vulgaris HOM05D001061 ORTHO05D006729 1.9e-29 133.7 92 70.7
MD07G1267600 Malus domestica HOM05D001061 ORTHO05D006729 1.9e-29 133.7 92 69.6
Eucgr.K00248 Eucalyptus grandis HOM05D001061 ORTHO05D006729 3.2e-29 132.9 92 68.5
Eucgr.L01884 Eucalyptus grandis HOM05D001061 ORTHO05D006729 3.2e-29 132.9 92 68.5
CSS0048539 Camellia sinensis var. sinensis HOM05D001061 ORTHO05D006729 4.2e-29 132.5 92 66.3
CiPaw.03G105500 Carya illinoinensis HOM05D001061 ORTHO05D006729 4.2e-29 132.5 92 69.6
Prupe.2G293300 Prunus persica HOM05D001061 ORTHO05D006729 4.2e-29 132.5 92 67.4
Lalb_Chr06g0161081 Lupinus albus HOM05D001061 ORTHO05D006729 1.2e-28 131.0 92 69.6
Dinv28450 Davidia involucrata HOM05D001061 ORTHO05D006729 2.7e-28 129.8 92 66.3
Lj5g0016766 Lotus japonicus HOM05D001061 ORTHO05D006729 2.7e-28 129.8 92 68.5
arahy.Tifrunner.gnm1.ann1.353VBZ Arachis hypogaea HOM05D001061 ORTHO05D006729 4.6e-28 129.0 92 68.5
arahy.Tifrunner.gnm1.ann1.U4UA85 Arachis hypogaea HOM05D001061 ORTHO05D006729 4.6e-28 129.0 92 68.5
Aqoxy7G00378 Aquilegia oxysepala HOM05D001061 ORTHO05D006729 1.8e-27 127.1 93 65.6
CANSAT21G0044 Cannabis sativa HOM05D001061 ORTHO05D006729 1.8e-27 127.1 94 66.0
TWI23G0875 Tripterygium wilfordii HOM05D001061 ORTHO05D006729 3.0e-27 126.3 92 66.3
Ca_10778_v3 Cicer arietinum L. HOM05D001061 ORTHO05D006729 3.9e-27 125.9 92 67.4
Oeu022585.1 Olea europaea HOM05D001061 ORTHO05D006729 3.9e-27 125.9 92 71.7
Cc02_g03080 Coffea canephora HOM05D001061 ORTHO05D006729 5.1e-27 125.6 92 68.5
Manes.14G026600 Manihot esculenta HOM05D001061 ORTHO05D006729 1.1e-26 124.4 92 66.3
GSVIVG01006611001 Vitis vinifera HOM05D001061 ORTHO05D006729 1.1e-26 124.4 93 66.7
GSVIVG01007141001 Vitis vinifera HOM05D001061 ORTHO05D006729 1.1e-26 124.4 93 66.7
TPR.G14341 Trifolium pratense HOM05D001061 ORTHO05D006729 1.5e-26 124.0 93 66.7
Lj1A996G55 Lonicera japonica HOM05D001061 ORTHO05D006729 1.9e-26 123.6 92 67.4
GSVIVG01010538001 Vitis vinifera HOM05D001061 ORTHO05D006729 3.3e-26 122.9 93 65.6
CDE11G1074 Ceratophyllum demersum HOM05D001061 ORTHO05D006729 7.4e-26 121.7 92 65.2
Potri.015G142900 Populus trichocarpa HOM05D001061 ORTHO05D006729 7.4e-26 121.7 93 67.7
SGA_v2.0_scaffold44G16715 Striga asiatica HOM05D001061 ORTHO05D006729 7.4e-26 121.7 92 67.4
Phvul.007G069100 Phaseolus vulgaris HOM05D001061 ORTHO05D006729 1.6e-25 120.6 92 62.0
Sabra15G0152800 Salix brachista HOM05D007457 ORTHO05D006729 1.6e-25 120.6 93 66.7
Glyma.20G157600 Glycine max HOM05D001061 ORTHO05D006729 2.8e-25 119.8 92 66.3
VMungo0720G3063 Vigna mungo HOM05D001061 ORTHO05D006729 2.8e-25 119.8 92 62.0
ECA233G1964 Erigeron canadensis HOM05D001061 ORTHO05D009717 4.8e-25 119.0 92 67.4
Nitab4.5_0000716g0140 Nicotiana tabacum HOM05D001061 ORTHO05D006729 4.8e-25 119.0 94 67.0
Psat6g199840 Pisum sativum HOM05D001061 ORTHO05D006729 4.8e-25 119.0 93 64.5
RcHm_v2.0_Chr1g0377121 Rosa chinensis HOM05D001061 ORTHO05D006729 6.3e-25 118.6 92 64.1
Sc25g0000470 Simmondsia chinensis HOM05D001061 ORTHO05D006729 6.3e-25 118.6 92 64.1
Duzib205G0347 Durio zibethinus HOM05D001061 ORTHO05D006729 8.2e-25 118.2 96 64.6
Lsat_1_v5_gn_8_8260 Lactuca sativa HOM05D001061 ORTHO05D006729 8.2e-25 118.2 102 64.7
Thecc.03G175500 Theobroma cacao HOM05D001061 ORTHO05D006729 1.1e-24 117.9 92 64.1
Rhsim03G0180100 Rhododendron simsii HOM05D001061 ORTHO05D006729 1.4e-24 117.5 93 66.7
SHI13790 Sapria himalayana HOM05D001061 ORTHO05D006729 1.4e-24 117.5 92 65.2
COL.COLO4_14300 Corchorus olitorius HOM05D001061 ORTHO05D006729 2.4e-24 116.7 96 64.6
Migut.F00349 Erythranthe guttata HOM05D001061 ORTHO05D006729 2.4e-24 116.7 92 64.1
Peaxi162Scf01452g00006 Petunia axillaris HOM05D001061 ORTHO05D006729 6.9e-24 115.2 96 60.4
DCAR_009363 Daucus carota HOM05D001061 ORTHO05D006729 9.0e-24 114.8 95 63.2
Medtr1g100683 Medicago truncatula HOM05D001061 ORTHO05D006729 9.0e-24 114.8 93 61.3
vmacro06688 Vaccinium macrocarpon HOM05D001061 ORTHO05D006729 9.0e-24 114.8 93 63.4
Gohir.A12G258300 Gossypium hirsutum HOM05D001061 ORTHO05D006729 1.2e-23 114.4 127 52.8
Thhalv10024274m.g Eutrema salsugineum HOM05D001061 ORTHO05D006729 1.5e-23 114.0 102 54.9
SalBow4G2537 Salvia bowleyana HOM05D001061 ORTHO05D006729 1.5e-23 114.0 93 65.6
CAN.G913.1 Capsicum annuum HOM05D001061 ORTHO05D006729 2.6e-23 113.2 92 64.1
CARHR232960 Cardamine hirsuta HOM05D001061 ORTHO05D006729 2.6e-23 113.2 104 54.8
FvH4_7g29360 Fragaria vesca HOM05D001061 ORTHO05D006729 3.4e-23 112.8 96 60.4
FAN06G1718 Fragaria x ananassa HOM05D002077 ORTHO05D006729 3.4e-23 112.8 96 60.4
HanXRQChr05g0141231 Helianthus annuus HOM05D001061 ORTHO05D006729 4.5e-23 112.5 95 61.1
AT4G25540 Arabidopsis thaliana HOM05D001061 ORTHO05D006729 5.9e-23 112.1 104 53.8
Carub.0007s1544 Capsella rubella HOM05D001061 ORTHO05D006729 1.0e-22 111.3 104 51.9
FAN06G1288 Fragaria x ananassa HOM05D002077 ORTHO05D006729 1.0e-22 111.3 96 59.4
Gohir.D12G259600 Gossypium hirsutum HOM05D001061 ORTHO05D006729 1.0e-22 111.3 95 61.1
Gorai.008G278000 Gossypium raimondii HOM05D001061 ORTHO05D006729 1.0e-22 111.3 95 61.1
Solyc03g025890.2 Solanum lycopersicum HOM05D001061 ORTHO05D006729 1.3e-22 110.9 92 64.1
THA.LOC104811986 Tarenaya hassleriana HOM05D001061 ORTHO05D006729 1.7e-22 110.5 96 59.4
Ciclev10004302m.g Citrus clementina HOM05D001061 ORTHO05D006729 2.2e-22 110.2 97 59.8
Nitab4.5_0003365g0010 Nicotiana tabacum HOM05D001061 ORTHO05D006729 2.2e-22 110.2 94 61.7
Sopen03g004700 Solanum pennellii HOM05D001061 ORTHO05D006729 2.2e-22 110.2 101 61.4
Psat4g089160 Pisum sativum HOM05D001061 ORTHO05D006729 2.9e-22 109.8 88 61.4
MBI18_g09768_MAGBIO Magnolia biondii HOM05D001061 ORTHO05D006729 1.1e-21 107.8 108 54.6
Sp7g23570 Schrenkiella parvula HOM05D001061 ORTHO05D006729 1.1e-21 107.8 95 53.7
AL7G27560 Arabidopsis lyrata HOM05D001061 ORTHO05D006729 1.9e-21 107.1 104 53.8
unitig_46.g18782 Utricularia gibba HOM05D001061 ORTHO05D006729 2.5e-21 106.7 92 62.0
C07p54390 Brassica napus HOM05D001061 ORTHO05D006729 3.2e-21 106.3 96 55.2
BolC7t45925H Brassica oleracea HOM05D001061 ORTHO05D006729 3.2e-21 106.3 96 55.2
BraA03t14678Z Brassica rapa HOM05D001061 ORTHO05D006729 7.2e-21 105.1 96 55.2
A03p56070 Brassica napus HOM05D001061 ORTHO05D006729 9.4e-21 104.8 96 55.2
FAN03G0437 Fragaria x ananassa HOM05D001061 ORTHO05D006729 9.4e-21 104.8 92 60.9
FAN10G0894 Fragaria x ananassa HOM05D001061 ORTHO05D006729 9.4e-21 104.8 92 60.9
HPP92_020859 Vanilla planifolia HOM05D001061 ORTHO05D006729 9.4e-21 104.8 94 57.4
PGR142G2564 Punica granatum HOM05D001061 ORTHO05D006729 1.6e-20 104.0 98 61.2
BcaC06g32803 Brassica carinata HOM05D001061 ORTHO05D006729 2.1e-20 103.6 96 54.2
FAN03G1828 Fragaria x ananassa HOM05D002077 ORTHO05D006729 2.1e-20 103.6 92 59.8
Atru.chr1.472 Acer truncatum HOM05D001061 ORTHO05D006729 3.6e-20 102.8 70 70.0
ATR0680G072 Amborella trichopoda HOM05D001061 ORTHO05D006729 4.6e-20 102.4 93 59.1
PSO675G8279 Papaver somniferum HOM05D001061 ORTHO05D006729 8.8e-19 98.2 100 56.0
Aa31sc165G10 Aethionema arabicum HOM05D001061 ORTHO05D006729 1.5e-18 97.4 98 48.0
SMO116G0252 Selaginella moellendorffii HOM05D001061 ORTHO05D006729 8.2e-17 91.7 99 50.5
Pp3c2_16220 Physcomitrium patens HOM05D001061 ORTHO05D006729 1.1e-16 91.3 74 63.5
Pp3c2_16228 Physcomitrium patens HOM05D001061 ORTHO05D006729 1.1e-16 91.3 74 63.5
CBR_g38452 Chara braunii HOM05D001061 ORTHO05D006729 4.5e-15 85.9 76 61.8
Mapoly0043s0063 Marchantia polymorpha HOM05D001061 ORTHO05D006729 5.9e-15 85.5 74 58.1
SEGI_11976 Sequoiadendron giganteum HOM05D001061 ORTHO05D006729 1.1e-13 81.3 84 54.8
Os04g0682900 Oryza sativa ssp. japonica HOM05D001061 ORTHO05D006729 2.3e-11 73.6 121 46.3
Zm00001eb434000 Zea mays HOM05D001061 ORTHO05D006729 3.9e-11 72.8 119 42.0
Cfa027083 Carpinus fangiana HOM05D001061 ORTHO05D006729 9.1e-08 61.6 75 45.3
PRCOL_00004183 Prasinoderma coloniale HOM05D001061 ORTHO05D006729 5.9e-07 58.9 54 55.6


User provided reference genes

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