Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C027929.2 Cucumis melo HOM05D000216 ORTHO05D000634 2.0e-42 175.3 81 100.0
MELO3C001093.2 Cucumis melo HOM05D000216 ORTHO05D000634 1.6e-39 165.6 78 98.7
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 1.6e-39 165.6 78 98.7
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 1.6e-39 165.6 78 98.7
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 4.5e-39 164.1 78 96.2
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 5.9e-39 163.7 78 96.2
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 5.9e-39 163.7 78 96.2
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 1.7e-38 162.2 78 94.9
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 2.3e-38 161.8 78 94.9
CAN.G939.14 Capsicum annuum HOM05D000216 ORTHO05D000634 2.3e-38 161.8 78 94.9
Hma1.2p1_0094F.1_g047104 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 2.3e-38 161.8 78 94.9
Lj2A1237T129 Lonicera japonica HOM05D000216 ORTHO05D000634 2.3e-38 161.8 78 94.9
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 2.3e-38 161.8 78 94.9
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 2.3e-38 161.8 78 94.9
Nn3g18112 Nelumbo nucifera HOM05D000216 ORTHO05D000634 2.3e-38 161.8 78 94.9
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 2.9e-38 161.4 78 94.9
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 3.8e-38 161.0 79 93.7
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 3.8e-38 161.0 79 93.7
BolSC44t60847H Brassica oleracea HOM05D000216 ORTHO05D000634 3.8e-38 161.0 79 93.7
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 3.8e-38 161.0 79 93.7
BraSC140t45588Z Brassica rapa HOM05D000216 ORTHO05D000634 3.8e-38 161.0 79 93.7
BraSC151t45695Z Brassica rapa HOM05D000216 ORTHO05D000634 3.8e-38 161.0 79 93.7
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 6.5e-38 160.2 78 93.6
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 8.6e-38 159.8 78 94.9
Psat4g147920 Pisum sativum HOM05D000216 ORTHO05D000634 8.6e-38 159.8 78 94.9
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 1.1e-37 159.5 78 93.6
Lalb_Chr09g0335371 Lupinus albus HOM05D000216 ORTHO05D000634 1.5e-37 159.1 78 93.6
Lalb_Chr22g0361661 Lupinus albus HOM05D000216 ORTHO05D000634 1.5e-37 159.1 78 93.6
SHI35296 Sapria himalayana HOM05D000216 ORTHO05D000634 1.5e-37 159.1 78 93.6
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 1.5e-37 159.1 78 94.9
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.9e-37 158.7 78 91.0
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.9e-37 158.7 78 91.0
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 1.9e-37 158.7 79 92.4
CARHR281920 Cardamine hirsuta HOM05D000216 ORTHO05D000634 1.9e-37 158.7 79 92.4
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.9e-37 158.7 78 93.6
PGSC0003DMG400020296 Solanum tuberosum HOM05D000216 ORTHO05D000634 1.9e-37 158.7 78 93.6
Nitab4.5_0001761g0170 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.5e-37 158.3 78 92.3
Lj2P1224T100 Lonicera japonica HOM05D000216 ORTHO05D000634 3.2e-37 157.9 78 92.3
Lj2P1227T99 Lonicera japonica HOM05D000216 ORTHO05D000634 3.2e-37 157.9 78 92.3
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 5.5e-37 157.1 78 91.0
CAN.G844.3 Capsicum annuum HOM05D000216 ORTHO05D000634 9.5e-37 156.4 78 91.0
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 9.5e-37 156.4 78 92.3
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 1.2e-36 156.0 78 92.3
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.2e-36 156.0 78 91.0
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.2e-36 156.0 78 91.0
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.2e-36 156.0 78 91.0
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.2e-36 156.0 78 91.0
Hund28153 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.2e-36 156.0 78 91.0
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.2e-36 156.0 78 91.0
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.2e-36 156.0 78 91.0
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.2e-36 156.0 78 91.0
Hund28617 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.2e-36 156.0 78 91.0
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.2e-36 156.0 78 91.0
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.2e-36 156.0 78 91.0
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.2e-36 156.0 78 91.0
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 1.6e-36 155.6 78 89.7
arahy.Tifrunner.gnm1.ann1.KRC0HM Arachis hypogaea HOM05D000216 ORTHO05D000634 2.1e-36 155.2 78 92.3
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 2.1e-36 155.2 78 92.3
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 2.1e-36 155.2 78 89.7
ECA169G0008 Erigeron canadensis HOM05D000216 ORTHO05D000634 2.1e-36 155.2 78 89.7
HanXRQChr00c0300g0573171 Helianthus annuus HOM05D000216 ORTHO05D000634 2.1e-36 155.2 78 89.7
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 2.1e-36 155.2 78 89.7
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 2.1e-36 155.2 78 89.7
GSVIVG01019173001 Vitis vinifera HOM05D000216 ORTHO05D000634 2.1e-36 155.2 78 91.0
Nitab4.5_0005637g0010 Nicotiana tabacum HOM05D000216 ORTHO05D000634 3.6e-36 154.5 78 91.0
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 4.7e-36 154.1 78 89.7
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 4.7e-36 154.1 78 91.0
Psat5g134600 Pisum sativum HOM05D000216 ORTHO05D000634 6.1e-36 153.7 78 92.3
SGA_v2.0_scaffold477G52216 Striga asiatica HOM05D000216 ORTHO05D000634 6.1e-36 153.7 78 89.7
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 8.0e-36 153.3 74 95.9
Lsat_1_v5_gn_9_5941 Lactuca sativa HOM05D000216 ORTHO05D000634 8.0e-36 153.3 78 88.5
GSVIVG01017094001 Vitis vinifera HOM05D000216 ORTHO05D000634 1.8e-35 152.1 78 88.5
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 3.0e-35 151.4 84 85.7
AUR62030122 Chenopodium quinoa HOM05D000216 ORTHO05D000634 4.0e-35 151.0 78 88.5
SGA_v2.0_scaffold119G32687 Striga asiatica HOM05D000216 ORTHO05D000634 5.2e-35 150.6 78 88.5
arahy.Tifrunner.gnm1.ann1.TW2HF4 Arachis hypogaea HOM05D000216 ORTHO05D000634 6.8e-35 150.2 78 89.7
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 1.5e-34 149.1 84 84.5
AUR62024082 Chenopodium quinoa HOM05D000216 ORTHO05D000634 3.4e-34 147.9 77 88.3
Hund25861 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.3e-33 146.0 81 84.0
ClCG01G011260 Citrullus lanatus HOM05D000216 ORTHO05D000634 3.7e-33 144.4 78 85.9
Eucgr.J01352 Eucalyptus grandis HOM05D000216 ORTHO05D000634 1.4e-32 142.5 78 84.6
Thhalv10023328m.g Eutrema salsugineum HOM05D000216 ORTHO05D000634 1.4e-32 142.5 75 88.0
HanXRQChr07g0188331 Helianthus annuus HOM05D000216 ORTHO05D000634 1.4e-32 142.5 71 90.1
Lalb_Chr06g0173021 Lupinus albus HOM05D000216 ORTHO05D000634 2.4e-32 141.7 77 84.4
Migut.D01341 Erythranthe guttata HOM05D000216 ORTHO05D000634 2.3e-30 135.2 67 91.0
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 3.8e-30 134.4 67 89.6
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 1.9e-29 132.1 78 83.3
Hund12597 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.0e-27 124.4 77 72.7
CAN.G1738.9 Capsicum annuum HOM05D000216 ORTHO05D000634 1.2e-26 122.9 61 90.2
Gorai.001G101300 Gossypium raimondii HOM05D000216 ORTHO05D000634 3.7e-25 117.9 61 86.9
SMO086G0013 Selaginella moellendorffii HOM05D000216 ORTHO05D000634 5.4e-24 114.0 78 66.7
TPR.G17548 Trifolium pratense HOM05D000216 ORTHO05D000634 3.5e-23 111.3 55 92.7
Sc10g0006900 Simmondsia chinensis HOM05D000216 ORTHO05D000634 7.8e-23 110.2 61 77.0
HanXRQChr00c0988g0578121 Helianthus annuus HOM05D000216 ORTHO05D000634 3.9e-22 107.8 59 81.4
SEGI_37297 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 1.9e-21 105.5 67 73.1
CAN.G386.8 Capsicum annuum HOM05D000216 ORTHO05D001131 1.6e-20 102.4 48 95.8
arahy.Tifrunner.gnm1.ann1.ZJYB0J Arachis hypogaea HOM05D000216 ORTHO05D000473 4.7e-20 100.9 48 93.8
BolC5t28870H Brassica oleracea HOM05D000216 ORTHO05D000634 6.2e-20 100.5 54 87.0
Gohir.A09G019050 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.1e-19 99.8 52 82.7
Oeu045561.1 Olea europaea HOM05D000216 ORTHO05D000634 1.1e-19 99.8 52 84.6
Nitab4.5_0002868g0030 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.4e-19 99.4 78 64.1
HanXRQChr14g0436631 Helianthus annuus HOM05D000216 ORTHO05D000634 4.0e-19 97.8 48 91.7
arahy.Tifrunner.gnm1.ann1.09TZAG Arachis hypogaea HOM05D000216 ORTHO05D000634 3.4e-18 94.7 48 87.5
Ah.02g118920 Amaranthus hybridus HOM05D005794 ORTHO05D006814 3.7e-17 91.3 48 85.4
Oeu062867.1 Olea europaea HOM05D000216 ORTHO05D000634 2.0e-15 85.5 44 81.8
Aa31csc39G120 Aethionema arabicum HOM05D000216 ORTHO05D000634 8.6e-14 80.1 37 91.9
Ah.10g028700 Amaranthus hybridus HOM05D029963 ORTHO05D026499 9.5e-13 76.6 38 92.1
Gohir.D13G143950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.1e-11 73.2 38 89.5
arahy.Tifrunner.gnm1.ann1.4QEF9J Arachis hypogaea HOM05D000216 ORTHO05D000634 5.2e-11 70.9 39 76.9
HanXRQChr03g0073121 Helianthus annuus HOM05D000216 ORTHO05D000634 9.9e-10 66.6 33 93.9
FAN27G0873 Fragaria x ananassa HOM05D000743 ORTHO05D000580 8.3e-09 63.5 31 93.5
Solyc03g095380.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 5.4e-08 60.8 51 60.8
Nitab4.5_0000172g0280 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.2e-07 59.7 48 56.2
Nitab4.5_0001783g0070 Nicotiana tabacum HOM05D000216 ORTHO05D002807 1.2e-07 59.7 34 82.4
ATR0624G050 Amborella trichopoda HOM05D000216 ORTHO05D000634 1.6e-07 59.3 33 78.8
Migut.D01415 Erythranthe guttata HOM05D000216 ORTHO05D000634 3.5e-07 58.2 28 96.4
Solyc01g017420.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.3e-06 55.5 77 45.5
Nn256s45908 Nelumbo nucifera HOM05D000216 ORTHO05D000634 8.6e-06 53.5 30 83.3
Nn2g14713 Nelumbo nucifera HOM05D000216 ORTHO05D000634 8.6e-06 53.5 30 83.3
Nn2g14716 Nelumbo nucifera HOM05D000216 ORTHO05D000634 8.6e-06 53.5 30 83.3
Nn2g14718 Nelumbo nucifera HOM05D000216 ORTHO05D000634 8.6e-06 53.5 30 83.3


User provided reference genes

Program Settings