Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 1.1e-209 733.0 373 100.0
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 9.3e-196 686.8 373 93.6
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 3.3e-169 598.6 374 83.2
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 3.6e-115 419.1 380 59.2
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 1.5e-108 397.1 391 55.5
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 2.5e-108 396.4 400 57.0
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 1.6e-107 393.7 394 56.1
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 2.1e-107 393.3 404 55.4
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 1.7e-104 383.6 382 56.8
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 2.2e-104 383.3 378 55.6
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 2.9e-104 382.9 367 56.9
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 1.4e-103 380.6 377 56.0
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 2.4e-103 379.8 388 56.2
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 4.1e-103 379.0 375 56.3
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 9.2e-103 377.9 381 56.7
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 2.0e-102 376.7 376 55.1
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 3.5e-102 375.9 396 52.5
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 6.0e-102 375.2 381 55.6
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 1.3e-101 374.0 379 54.4
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 2.3e-101 373.2 369 55.3
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 2.3e-101 373.2 377 55.7
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 2.3e-101 373.2 383 53.5
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 3.9e-101 372.5 387 54.5
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 3.9e-101 372.5 380 54.5
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 5.0e-101 372.1 373 55.2
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 6.6e-101 371.7 340 57.1
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 1.5e-100 370.5 396 55.3
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 1.9e-100 370.2 337 60.5
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 3.3e-100 369.4 365 54.0
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 4.3e-100 369.0 379 53.6
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 7.3e-100 368.2 392 53.6
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 1.6e-99 367.1 373 54.2
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 2.1e-99 366.7 380 52.9
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 1.4e-98 364.0 385 54.3
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 2.3e-98 363.2 378 55.3
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 3.4e-97 359.4 372 55.9
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 1.3e-96 357.5 379 52.5
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 1.7e-96 357.1 399 50.6
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 3.7e-96 355.9 383 54.3
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 3.7e-96 355.9 395 51.4
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 1.4e-95 354.0 379 53.6
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 9.2e-95 351.3 390 53.6
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 1.2e-94 350.9 401 51.4
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 2.7e-94 349.7 372 54.3
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 2.7e-94 349.7 377 53.6
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 3.5e-94 349.4 380 50.8
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 2.3e-93 346.7 380 52.1
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 3.0e-93 346.3 384 51.0
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 5.1e-93 345.5 370 53.2
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 5.1e-93 345.5 371 53.4
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 6.6e-93 345.1 395 50.1
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 8.6e-93 344.7 384 50.8
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 8.6e-93 344.7 380 52.1
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 1.9e-92 343.6 371 51.5
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 3.3e-92 342.8 377 52.3
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 4.3e-92 342.4 175 96.0
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 4.3e-92 342.4 383 52.0
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 5.6e-92 342.0 378 53.2
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 9.5e-92 341.3 365 52.9
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 2.4e-90 336.7 300 58.0
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 1.2e-89 334.3 365 53.4
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 2.6e-89 333.2 351 54.7
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 2.6e-89 333.2 369 53.1
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 4.4e-89 332.4 378 52.1
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 7.6e-89 331.6 359 53.8
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 1.3e-88 330.9 369 51.8
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 4.9e-88 328.9 394 47.5
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 1.1e-87 327.8 372 53.5
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 3.2e-87 326.2 372 53.0
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 4.1e-87 325.9 354 52.8
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 5.4e-87 325.5 373 51.7
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 5.4e-87 325.5 395 47.3
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 2.1e-86 323.6 376 49.7
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 2.1e-86 323.6 365 50.4
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 3.5e-86 322.8 363 49.6
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 1.3e-85 320.9 373 51.2
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 5.1e-85 318.9 373 49.9
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 6.6e-85 318.5 371 51.5
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 6.6e-85 318.5 371 51.5
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 6.2e-83 312.0 356 49.2
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 5.2e-82 308.9 331 55.0
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 1.1e-79 301.2 331 51.4
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 1.2e-78 297.7 472 42.4
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 3.0e-77 293.1 407 43.5
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 3.0e-77 293.1 376 46.8
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 6.6e-77 292.0 396 46.0
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 1.9e-76 290.4 258 65.1
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 3.8e-72 276.2 273 53.1
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 1.3e-69 267.7 571 34.7
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 2.1e-67 260.4 362 44.8
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 5.3e-66 255.8 314 43.6
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 2.0e-65 253.8 282 49.6
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 1.2e-62 244.6 245 52.2
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 3.3e-60 236.5 270 47.0
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 1.4e-55 221.1 203 57.1
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 9.3e-55 218.4 314 38.9
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 6.5e-48 195.7 155 65.8
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 1.9e-47 194.1 324 36.1
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 6.7e-45 185.7 190 55.3
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 4.1e-42 176.4 224 48.2
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 6.1e-38 162.5 195 48.7
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 1.3e-35 154.8 198 43.9
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 1.7e-35 154.5 379 33.2
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 1.8e-34 151.0 159 53.5
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 2.0e-33 147.5 98 61.2
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 4.5e-33 146.4 199 44.7
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 2.2e-27 127.5 113 57.5
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 5.5e-23 112.8 136 47.1
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 1.4e-18 98.2 141 43.3
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 7.7e-09 65.9 131 28.2


User provided reference genes

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