Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C001721.2 Cucumis melo HOM05D003939 ORTHO05D005979 5.1e-27 123.6 61 100.0
MELO3C016065.2 Cucumis melo HOM05D003939 ORTHO05D005979 5.1e-27 123.6 61 100.0
MELO3C001621.2 Cucumis melo HOM05D003939 ORTHO05D005979 6.7e-27 123.2 61 98.4
CsaV3_4G008740 Cucumis sativus L. HOM05D003939 ORTHO05D005979 1.6e-25 118.6 61 95.1
ClCG07G007360 Citrullus lanatus HOM05D003939 ORTHO05D005979 3.2e-21 104.4 61 86.9
Sed0008583 Sechium edule HOM05D003939 ORTHO05D005979 1.3e-17 92.4 61 77.0
QL02p067905 Quercus lobata HOM05D003939 ORTHO05D005979 8.2e-17 89.7 61 75.4
Dinv33821 Davidia involucrata HOM05D003939 ORTHO05D005979 2.4e-16 88.2 61 70.5
Thecc.04G092900 Theobroma cacao HOM05D003939 ORTHO05D005979 2.4e-16 88.2 61 73.8
Duzib264G0523 Durio zibethinus HOM05D003939 ORTHO05D005979 5.3e-16 87.0 61 72.1
Cpa.g.sc14.167 Carica papaya HOM05D003939 ORTHO05D005979 6.9e-16 86.7 47 85.1
VMungo0464G1977 Vigna mungo HOM05D003939 ORTHO05D005979 6.9e-16 86.7 61 72.1
PGR083G1596 Punica granatum HOM05D003939 ORTHO05D005979 1.2e-15 85.9 61 68.9
Gohir.D09G009300 Gossypium hirsutum HOM05D003939 ORTHO05D005979 1.5e-15 85.5 61 72.1
Gorai.006G011000 Gossypium raimondii HOM05D003939 ORTHO05D005979 1.5e-15 85.5 61 72.1
THA.LOC104821002 Tarenaya hassleriana HOM05D003939 ORTHO05D005979 1.5e-15 85.5 61 67.2
Actinidia01988 Actinidia chinensis HOM05D003939 ORTHO05D005979 3.4e-15 84.3 61 67.2
Manes.01G097400 Manihot esculenta HOM05D003939 ORTHO05D005979 3.4e-15 84.3 61 70.5
Haze_14442 Corylus avellana HOM05D003939 ORTHO05D005979 4.5e-15 84.0 61 70.5
Gohir.A09G010200 Gossypium hirsutum HOM05D003939 ORTHO05D005979 4.5e-15 84.0 61 70.5
Nitab4.5_0001637g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 4.5e-15 84.0 61 70.5
Atru.chr8.419 Acer truncatum HOM05D003939 ORTHO05D005979 7.7e-15 83.2 59 69.5
arahy.Tifrunner.gnm1.ann1.U2J8P8 Arachis hypogaea HOM05D003939 ORTHO05D005979 7.7e-15 83.2 61 70.5
A10p23410 Brassica napus HOM05D003939 ORTHO05D005979 7.7e-15 83.2 61 65.6
C09p61660 Brassica napus HOM05D003939 ORTHO05D005979 7.7e-15 83.2 61 65.6
BolC9t59004H Brassica oleracea HOM05D003939 ORTHO05D005979 7.7e-15 83.2 61 65.6
BraA10t44409Z Brassica rapa HOM05D003939 ORTHO05D005979 7.7e-15 83.2 61 65.6
Cc07_g03930 Coffea canephora HOM05D003939 ORTHO05D005979 7.7e-15 83.2 61 68.9
arahy.Tifrunner.gnm1.ann1.HNPA74 Arachis hypogaea HOM05D003939 ORTHO05D005979 1.0e-14 82.8 61 70.5
Thhalv10012417m.g Eutrema salsugineum HOM05D003939 ORTHO05D005979 1.0e-14 82.8 61 63.9
Nitab4.5_0002960g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 1.0e-14 82.8 61 68.9
CSS0011135 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 1.3e-14 82.4 61 68.9
Ca_04301_v3 Cicer arietinum L. HOM05D003939 ORTHO05D005979 1.3e-14 82.4 61 67.2
Sp6g28560 Schrenkiella parvula HOM05D003939 ORTHO05D005979 1.3e-14 82.4 61 63.9
CAN.G381.1 Capsicum annuum HOM05D003939 ORTHO05D005979 1.7e-14 82.0 61 67.2
Ciclev10010894m.g Citrus clementina HOM05D003939 ORTHO05D005979 1.7e-14 82.0 61 67.2
TPR.G10018 Trifolium pratense HOM05D003939 ORTHO05D005979 1.7e-14 82.0 61 68.9
Cfa007652 Carpinus fangiana HOM05D003939 ORTHO05D005979 2.9e-14 81.3 61 68.9
Glyma.13G057300 Glycine max HOM05D003939 ORTHO05D005979 2.9e-14 81.3 61 67.2
Peaxi162Scf00451g00326 Petunia axillaris HOM05D003939 ORTHO05D005979 3.8e-14 80.9 61 67.2
Glyma.19G029000 Glycine max HOM05D003939 ORTHO05D005979 6.5e-14 80.1 61 65.6
MD17G1057600 Malus domestica HOM05D003939 ORTHO05D005979 6.5e-14 80.1 61 67.2
Phvul.004G035100 Phaseolus vulgaris HOM05D003939 ORTHO05D005979 6.5e-14 80.1 61 68.9
CANSAT64G0725 Cannabis sativa HOM05D003939 ORTHO05D005979 8.5e-14 79.7 61 65.6
Prupe.3G256700 Prunus persica HOM05D003939 ORTHO05D005979 8.5e-14 79.7 61 67.2
Solyc03g059420.4 Solanum lycopersicum HOM05D003939 ORTHO05D005979 8.5e-14 79.7 61 63.9
Medtr6g015060 Medicago truncatula HOM05D003939 ORTHO05D005979 1.1e-13 79.3 61 65.6
AL6G26400 Arabidopsis lyrata HOM05D003939 ORTHO05D005979 1.4e-13 79.0 61 60.7
Sopen03g014250 Solanum pennellii HOM05D003939 ORTHO05D005979 1.4e-13 79.0 61 63.9
A02p03080 Brassica napus HOM05D003939 ORTHO05D005979 1.9e-13 78.6 61 62.3
BraA02t05278Z Brassica rapa HOM05D003939 ORTHO05D005979 1.9e-13 78.6 61 62.3
DCAR_026524 Daucus carota HOM05D003939 ORTHO05D005979 1.9e-13 78.6 61 68.9
FAN09G4101 Fragaria x ananassa HOM05D003939 ORTHO05D005979 1.9e-13 78.6 61 62.3
MBI19_g03793_MAGBIO Magnolia biondii HOM05D003939 ORTHO05D005979 1.9e-13 78.6 61 67.2
MD09G1064300 Malus domestica HOM05D003939 ORTHO05D005979 1.9e-13 78.6 61 67.2
PGSC0003DMG400012376 Solanum tuberosum HOM05D003939 ORTHO05D005979 1.9e-13 78.6 61 63.9
vmacro05651 Vaccinium macrocarpon HOM05D003939 ORTHO05D005979 1.9e-13 78.6 61 62.3
FvH4_6g47080 Fragaria vesca HOM05D003939 ORTHO05D005979 2.5e-13 78.2 61 62.3
FAN05G1397 Fragaria x ananassa HOM05D003939 ORTHO05D005979 2.5e-13 78.2 61 62.3
FAN14G2443 Fragaria x ananassa HOM05D003939 ORTHO05D005979 2.5e-13 78.2 61 62.3
RcHm_v2.0_Chr2g0166131 Rosa chinensis HOM05D003939 ORTHO05D005979 2.5e-13 78.2 61 62.3
Sc10g0004620 Simmondsia chinensis HOM05D003939 ORTHO05D005979 2.5e-13 78.2 61 65.6
GSVIVG01011514001 Vitis vinifera HOM05D003939 ORTHO05D005979 2.5e-13 78.2 61 65.6
BolC2t06707H Brassica oleracea HOM05D003939 ORTHO05D005979 3.2e-13 77.8 61 62.3
Carub.0006s1371 Capsella rubella HOM05D003939 ORTHO05D005979 3.2e-13 77.8 59 62.7
Eucgr.J01370 Eucalyptus grandis HOM05D003939 ORTHO05D005979 3.2e-13 77.8 61 70.5
Nn3g17411 Nelumbo nucifera HOM05D003939 ORTHO05D005979 3.2e-13 77.8 61 67.2
Potri.017G092600 Populus trichocarpa HOM05D003939 ORTHO05D005979 3.2e-13 77.8 61 67.2
Duzib187G1101 Durio zibethinus HOM05D003939 ORTHO05D005979 4.2e-13 77.4 48 77.1
Psat0s5863g0080 Pisum sativum HOM05D003939 ORTHO05D005979 4.2e-13 77.4 57 68.4
AT5G15540 Arabidopsis thaliana HOM05D003939 ORTHO05D005979 5.5e-13 77.0 61 57.4
CSS0039149 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 5.5e-13 77.0 61 63.9
MSTRG.3009 Avicennia marina HOM05D003939 ORTHO05D005979 7.2e-13 76.6 61 60.7
Sabra17G0081700 Salix brachista HOM05D003939 ORTHO05D005979 7.2e-13 76.6 47 78.7
Aa31LG11G14050 Aethionema arabicum HOM05D003939 ORTHO05D005979 9.4e-13 76.3 61 59.0
C02p07770 Brassica napus HOM05D003939 ORTHO05D005979 9.4e-13 76.3 61 60.7
COL.COLO4_21400 Corchorus olitorius HOM05D003939 ORTHO05D005979 9.4e-13 76.3 61 67.2
DCAR_025422 Daucus carota HOM05D003939 ORTHO05D005979 9.4e-13 76.3 61 67.2
Os07g0110400 Oryza sativa ssp. japonica HOM05D003939 ORTHO05D005979 9.4e-13 76.3 50 70.0
Migut.H00638 Erythranthe guttata HOM05D003939 ORTHO05D005979 1.2e-12 75.9 61 63.9
Psat0s5863g0040 Pisum sativum HOM05D003939 ORTHO05D005979 1.2e-12 75.9 57 66.7
FAN02G0596 Fragaria x ananassa HOM05D003939 ORTHO05D005979 1.6e-12 75.5 59 62.7
TAR371G0557 Trochodendron aralioides HOM05D003939 ORTHO05D005979 1.6e-12 75.5 61 65.6
EL10Ac2g03123 Beta vulgaris HOM05D003939 ORTHO05D005979 2.1e-12 75.1 61 60.7
Lalb_Chr06g0175001 Lupinus albus HOM05D003939 ORTHO05D005979 2.1e-12 75.1 61 65.6
Aqoxy3G03594 Aquilegia oxysepala HOM05D003939 ORTHO05D005979 3.6e-12 74.3 61 62.3
CSS0005126 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 3.6e-12 74.3 60 63.3
Lj2g0019419 Lotus japonicus HOM05D003939 ORTHO05D005979 3.6e-12 74.3 61 62.3
PSO013G0104 Papaver somniferum HOM05D003939 ORTHO05D005979 4.6e-12 73.9 61 60.7
Hund13156 Selenicereus undatus HOM05D003939 ORTHO05D005979 7.9e-12 73.2 61 62.3
Lju41A4T71 Lonicera japonica HOM05D003939 ORTHO05D005979 1.0e-11 72.8 61 60.7
Lsat_1_v5_gn_3_98161 Lactuca sativa HOM05D003939 ORTHO05D005979 1.4e-11 72.4 41 82.9
TWI60G0125 Tripterygium wilfordii HOM05D003939 ORTHO05D005979 1.4e-11 72.4 61 62.3
Rhsim10G0043700 Rhododendron simsii HOM05D003939 ORTHO05D005979 1.8e-11 72.0 61 60.7
SGA_v2.0_scaffold52G19175 Striga asiatica HOM05D003939 ORTHO05D005979 1.8e-11 72.0 61 65.6
AUR62018173 Chenopodium quinoa HOM05D003939 ORTHO05D005979 3.0e-11 71.2 61 59.0
AUR62042423 Chenopodium quinoa HOM05D003939 ORTHO05D005979 3.9e-11 70.9 61 59.0
SEGI_06328 Sequoiadendron giganteum HOM05D003939 ORTHO05D005979 3.9e-11 70.9 62 58.1
Ah.10g032070 Amaranthus hybridus HOM05D003939 ORTHO05D005979 6.7e-11 70.1 61 59.0
ECA246G3607 Erigeron canadensis HOM05D003939 ORTHO05D005979 6.7e-11 70.1 42 78.6
Zm00001eb298600 Zea mays HOM05D003939 ORTHO05D005979 6.7e-11 70.1 47 70.2
Zm00001eb118180 Zea mays HOM05D003939 ORTHO05D005979 8.8e-11 69.7 51 66.7
HanXRQChr17g0546541 Helianthus annuus HOM05D003939 ORTHO05D005979 1.1e-10 69.3 61 60.7
SHI25772 Sapria himalayana HOM05D003939 ORTHO05D005979 1.5e-10 68.9 49 65.3
SMO116G0168 Selaginella moellendorffii HOM05D003939 ORTHO05D005979 3.3e-10 67.8 61 57.4
CDE04G2810 Ceratophyllum demersum HOM05D003939 ORTHO05D005979 5.7e-10 67.0 61 63.9
Psat1g067400 Pisum sativum HOM05D003939 ORTHO05D005979 5.7e-10 67.0 78 51.3
ATR0064G076 Amborella trichopoda HOM05D003939 ORTHO05D005979 9.7e-10 66.2 51 64.7
SEGI_32509 Sequoiadendron giganteum HOM05D003939 ORTHO05D005979 2.8e-09 64.7 42 69.0
HPP92_012299 Vanilla planifolia HOM05D003939 ORTHO05D005979 4.8e-09 63.9 63 58.7
Pp3c15_14600 Physcomitrium patens HOM05D003939 ORTHO05D005979 8.2e-09 63.2 59 55.9
Mapoly0011s0050 Marchantia polymorpha HOM05D003939 ORTHO05D005979 5.3e-08 60.5 44 63.6
CBR_g19320 Chara braunii HOM05D003939 ORTHO05D005979 1.5e-07 58.9 41 63.4
AagrBONN_evm.TU.Sc2ySwM_344.3096 Anthoceros agrestis HOM05D003939 ORTHO05D005979 2.6e-07 58.2 61 52.5


User provided reference genes

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