Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C001621.2 Cucumis melo HOM05D003939 ORTHO05D005979 3.1e-37 157.9 78 100.0
MELO3C016065.2 Cucumis melo HOM05D003939 ORTHO05D005979 9.1e-37 156.4 78 97.4
CsaV3_4G008740 Cucumis sativus L. HOM05D003939 ORTHO05D005979 1.7e-35 152.1 78 94.9
ClCG07G007360 Citrullus lanatus HOM05D003939 ORTHO05D005979 2.2e-30 135.2 78 87.2
MELO3C001721.2 Cucumis melo HOM05D003939 ORTHO05D005979 5.0e-27 124.0 61 98.4
Sed0008583 Sechium edule HOM05D003939 ORTHO05D005979 4.2e-26 120.9 78 76.9
QL02p067905 Quercus lobata HOM05D003939 ORTHO05D005979 2.7e-25 118.2 78 75.6
Dinv33821 Davidia involucrata HOM05D003939 ORTHO05D005979 4.7e-25 117.5 78 73.1
PGR083G1596 Punica granatum HOM05D003939 ORTHO05D005979 1.8e-24 115.5 78 71.8
Manes.01G097400 Manihot esculenta HOM05D003939 ORTHO05D005979 5.2e-24 114.0 78 73.1
THA.LOC104821002 Tarenaya hassleriana HOM05D003939 ORTHO05D005979 6.8e-24 113.6 78 69.2
A10p23410 Brassica napus HOM05D003939 ORTHO05D005979 1.2e-23 112.8 78 69.2
C09p61660 Brassica napus HOM05D003939 ORTHO05D005979 1.2e-23 112.8 78 69.2
BolC9t59004H Brassica oleracea HOM05D003939 ORTHO05D005979 1.2e-23 112.8 78 69.2
BraA10t44409Z Brassica rapa HOM05D003939 ORTHO05D005979 1.2e-23 112.8 78 69.2
Haze_14442 Corylus avellana HOM05D003939 ORTHO05D005979 1.2e-23 112.8 78 73.1
VMungo0464G1977 Vigna mungo HOM05D003939 ORTHO05D005979 1.2e-23 112.8 78 71.8
Duzib264G0523 Durio zibethinus HOM05D003939 ORTHO05D005979 2.0e-23 112.1 78 71.8
Nitab4.5_0001637g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 2.0e-23 112.1 78 71.8
Thhalv10012417m.g Eutrema salsugineum HOM05D003939 ORTHO05D005979 2.6e-23 111.7 78 67.9
Thecc.04G092900 Theobroma cacao HOM05D003939 ORTHO05D005979 2.6e-23 111.7 78 71.8
Cpa.g.sc14.167 Carica papaya HOM05D003939 ORTHO05D005979 3.4e-23 111.3 78 73.1
Cc07_g03930 Coffea canephora HOM05D003939 ORTHO05D005979 3.4e-23 111.3 78 70.5
Sp6g28560 Schrenkiella parvula HOM05D003939 ORTHO05D005979 3.4e-23 111.3 78 67.9
Atru.chr8.419 Acer truncatum HOM05D003939 ORTHO05D005979 4.4e-23 110.9 78 69.2
Actinidia01988 Actinidia chinensis HOM05D003939 ORTHO05D005979 4.4e-23 110.9 78 67.9
MD17G1057600 Malus domestica HOM05D003939 ORTHO05D005979 4.4e-23 110.9 78 71.8
Nitab4.5_0002960g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 4.4e-23 110.9 78 70.5
Ciclev10010894m.g Citrus clementina HOM05D003939 ORTHO05D005979 5.7e-23 110.5 78 69.2
CSS0011135 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 7.5e-23 110.2 78 70.5
CAN.G381.1 Capsicum annuum HOM05D003939 ORTHO05D005979 7.5e-23 110.2 78 69.2
Cfa007652 Carpinus fangiana HOM05D003939 ORTHO05D005979 7.5e-23 110.2 78 71.8
FAN09G4101 Fragaria x ananassa HOM05D003939 ORTHO05D005979 1.3e-22 109.4 78 67.9
Ca_04301_v3 Cicer arietinum L. HOM05D003939 ORTHO05D005979 1.7e-22 109.0 78 67.9
FAN05G1397 Fragaria x ananassa HOM05D003939 ORTHO05D005979 1.7e-22 109.0 78 67.9
FAN14G2443 Fragaria x ananassa HOM05D003939 ORTHO05D005979 1.7e-22 109.0 78 67.9
Peaxi162Scf00451g00326 Petunia axillaris HOM05D003939 ORTHO05D005979 1.7e-22 109.0 78 69.2
Prupe.3G256700 Prunus persica HOM05D003939 ORTHO05D005979 1.7e-22 109.0 78 70.5
Gohir.D09G009300 Gossypium hirsutum HOM05D003939 ORTHO05D005979 2.2e-22 108.6 78 70.5
Gorai.006G011000 Gossypium raimondii HOM05D003939 ORTHO05D005979 2.2e-22 108.6 78 70.5
CANSAT64G0725 Cannabis sativa HOM05D003939 ORTHO05D005979 2.8e-22 108.2 78 67.9
RcHm_v2.0_Chr2g0166131 Rosa chinensis HOM05D003939 ORTHO05D005979 2.8e-22 108.2 78 67.9
TPR.G10018 Trifolium pratense HOM05D003939 ORTHO05D005979 2.8e-22 108.2 78 69.2
MD09G1064300 Malus domestica HOM05D003939 ORTHO05D005979 3.7e-22 107.8 78 70.5
Solyc03g059420.4 Solanum lycopersicum HOM05D003939 ORTHO05D005979 3.7e-22 107.8 78 66.7
FvH4_6g47080 Fragaria vesca HOM05D003939 ORTHO05D005979 4.9e-22 107.5 78 66.7
GSVIVG01011514001 Vitis vinifera HOM05D003939 ORTHO05D005979 4.9e-22 107.5 78 69.2
Gohir.A09G010200 Gossypium hirsutum HOM05D003939 ORTHO05D005979 6.3e-22 107.1 78 69.2
Sopen03g014250 Solanum pennellii HOM05D003939 ORTHO05D005979 6.3e-22 107.1 78 66.7
AL6G26400 Arabidopsis lyrata HOM05D003939 ORTHO05D005979 1.1e-21 106.3 78 64.1
arahy.Tifrunner.gnm1.ann1.U2J8P8 Arachis hypogaea HOM05D003939 ORTHO05D005979 1.1e-21 106.3 78 69.2
Phvul.004G035100 Phaseolus vulgaris HOM05D003939 ORTHO05D005979 1.1e-21 106.3 78 69.2
vmacro05651 Vaccinium macrocarpon HOM05D003939 ORTHO05D005979 1.1e-21 106.3 78 65.4
AT5G15540 Arabidopsis thaliana HOM05D003939 ORTHO05D005979 1.4e-21 105.9 78 62.8
arahy.Tifrunner.gnm1.ann1.HNPA74 Arachis hypogaea HOM05D003939 ORTHO05D005979 1.4e-21 105.9 78 69.2
A02p03080 Brassica napus HOM05D003939 ORTHO05D005979 1.4e-21 105.9 78 64.1
BraA02t05278Z Brassica rapa HOM05D003939 ORTHO05D005979 1.4e-21 105.9 78 64.1
Carub.0006s1371 Capsella rubella HOM05D003939 ORTHO05D005979 1.4e-21 105.9 78 65.4
Eucgr.J01370 Eucalyptus grandis HOM05D003939 ORTHO05D005979 1.4e-21 105.9 78 71.8
FAN02G0596 Fragaria x ananassa HOM05D003939 ORTHO05D005979 1.4e-21 105.9 78 66.7
Nn3g17411 Nelumbo nucifera HOM05D003939 ORTHO05D005979 1.4e-21 105.9 78 69.2
BolC2t06707H Brassica oleracea HOM05D003939 ORTHO05D005979 2.4e-21 105.1 78 64.1
Potri.017G092600 Populus trichocarpa HOM05D003939 ORTHO05D005979 2.4e-21 105.1 78 69.2
EL10Ac2g03123 Beta vulgaris HOM05D003939 ORTHO05D005979 3.1e-21 104.8 78 65.4
Glyma.19G029000 Glycine max HOM05D003939 ORTHO05D005979 3.1e-21 104.8 78 65.4
Sc10g0004620 Simmondsia chinensis HOM05D003939 ORTHO05D005979 3.1e-21 104.8 78 66.7
Migut.H00638 Erythranthe guttata HOM05D003939 ORTHO05D005979 4.1e-21 104.4 78 66.7
Glyma.13G057300 Glycine max HOM05D003939 ORTHO05D005979 4.1e-21 104.4 78 65.4
DCAR_026524 Daucus carota HOM05D003939 ORTHO05D005979 5.4e-21 104.0 78 67.9
MBI19_g03793_MAGBIO Magnolia biondii HOM05D003939 ORTHO05D005979 5.4e-21 104.0 78 66.7
Medtr6g015060 Medicago truncatula HOM05D003939 ORTHO05D005979 5.4e-21 104.0 78 65.4
Aa31LG11G14050 Aethionema arabicum HOM05D003939 ORTHO05D005979 7.0e-21 103.6 78 62.8
MSTRG.3009 Avicennia marina HOM05D003939 ORTHO05D005979 7.0e-21 103.6 78 62.8
C02p07770 Brassica napus HOM05D003939 ORTHO05D005979 7.0e-21 103.6 78 62.8
TAR371G0557 Trochodendron aralioides HOM05D003939 ORTHO05D005979 7.0e-21 103.6 78 67.9
CSS0039149 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 1.6e-20 102.4 78 65.4
DCAR_025422 Daucus carota HOM05D003939 ORTHO05D005979 2.0e-20 102.1 78 66.7
Hund13156 Selenicereus undatus HOM05D003939 ORTHO05D005979 2.0e-20 102.1 77 67.5
Aqoxy3G03594 Aquilegia oxysepala HOM05D003939 ORTHO05D005979 4.5e-20 100.9 78 64.1
AUR62018173 Chenopodium quinoa HOM05D003939 ORTHO05D005979 4.5e-20 100.9 78 64.1
COL.COLO4_21400 Corchorus olitorius HOM05D003939 ORTHO05D005979 4.5e-20 100.9 78 67.9
Sabra17G0081700 Salix brachista HOM05D003939 ORTHO05D005979 4.5e-20 100.9 78 66.7
AUR62042423 Chenopodium quinoa HOM05D003939 ORTHO05D005979 5.9e-20 100.5 78 64.1
Duzib187G1101 Durio zibethinus HOM05D003939 ORTHO05D005979 5.9e-20 100.5 78 67.9
Lju41A4T71 Lonicera japonica HOM05D003939 ORTHO05D005979 5.9e-20 100.5 78 64.1
TWI60G0125 Tripterygium wilfordii HOM05D003939 ORTHO05D005979 5.9e-20 100.5 78 65.4
Ah.10g032070 Amaranthus hybridus HOM05D003939 ORTHO05D005979 1.0e-19 99.8 78 64.1
CSS0005126 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 1.0e-19 99.8 77 64.9
Lalb_Chr06g0175001 Lupinus albus HOM05D003939 ORTHO05D005979 1.0e-19 99.8 78 65.4
Rhsim10G0043700 Rhododendron simsii HOM05D003939 ORTHO05D005979 1.0e-19 99.8 78 64.1
PSO013G0104 Papaver somniferum HOM05D003939 ORTHO05D005979 1.3e-19 99.4 78 61.5
Lj2g0019419 Lotus japonicus HOM05D003939 ORTHO05D005979 2.9e-19 98.2 78 62.8
Psat0s5863g0080 Pisum sativum HOM05D003939 ORTHO05D005979 2.9e-19 98.2 78 65.4
SGA_v2.0_scaffold52G19175 Striga asiatica HOM05D003939 ORTHO05D005979 3.8e-19 97.8 78 66.7
Psat0s5863g0040 Pisum sativum HOM05D003939 ORTHO05D005979 8.6e-19 96.7 78 64.1
PGSC0003DMG400012376 Solanum tuberosum HOM05D003939 ORTHO05D005979 8.6e-19 96.7 72 65.3
HanXRQChr17g0546541 Helianthus annuus HOM05D003939 ORTHO05D005979 1.9e-18 95.5 78 62.8
Os07g0110400 Oryza sativa ssp. japonica HOM05D003939 ORTHO05D005979 7.2e-18 93.6 78 57.7
CDE04G2810 Ceratophyllum demersum HOM05D003939 ORTHO05D005979 2.1e-17 92.0 78 64.1
SEGI_06328 Sequoiadendron giganteum HOM05D003939 ORTHO05D005979 2.1e-17 92.0 79 57.0
ECA246G3607 Erigeron canadensis HOM05D003939 ORTHO05D005979 3.6e-17 91.3 78 61.5
SMO116G0168 Selaginella moellendorffii HOM05D003939 ORTHO05D005979 8.0e-17 90.1 78 57.7
HPP92_012299 Vanilla planifolia HOM05D003939 ORTHO05D005979 8.0e-17 90.1 80 61.2
Zm00001eb118180 Zea mays HOM05D003939 ORTHO05D005979 1.4e-16 89.4 78 56.4
Psat1g067400 Pisum sativum HOM05D003939 ORTHO05D005979 4.0e-16 87.8 99 52.5
SHI25772 Sapria himalayana HOM05D003939 ORTHO05D005979 5.2e-16 87.4 79 54.4
Lsat_1_v5_gn_3_98161 Lactuca sativa HOM05D003939 ORTHO05D005979 6.8e-16 87.0 78 57.7
ATR0064G076 Amborella trichopoda HOM05D003939 ORTHO05D005979 1.5e-15 85.9 79 58.2
Zm00001eb298600 Zea mays HOM05D003939 ORTHO05D005979 4.4e-15 84.3 78 55.1
Pp3c15_14600 Physcomitrium patens HOM05D003939 ORTHO05D005979 4.9e-14 80.9 79 55.7
SEGI_32509 Sequoiadendron giganteum HOM05D003939 ORTHO05D005979 8.3e-14 80.1 78 55.1
AagrBONN_evm.TU.Sc2ySwM_344.3096 Anthoceros agrestis HOM05D003939 ORTHO05D005979 4.6e-12 74.3 78 51.3
Mapoly0011s0050 Marchantia polymorpha HOM05D003939 ORTHO05D005979 4.6e-12 74.3 78 51.3
CBR_g19320 Chara braunii HOM05D003939 ORTHO05D005979 7.3e-10 67.0 78 44.9
PSO063G3321 Papaver somniferum HOM05D003939 ORTHO05D005979 7.5e-07 57.0 78 43.6


User provided reference genes

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